RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 TFECO14948 347 aaPredicted RBP14.9□□□□□ -0.02
TPM1-219ENST00000559397 WISP2O76076 250 aa14.9□□□□□ -0.02
TPM1-219ENST00000559397 GP1BBP13224 206 aa14.9□□□□□ -0.02
TPM1-219ENST00000559397 B3GALT5-AS1P59052 145 aa14.9□□□□□ -0.02
TPM1-219ENST00000559397 EGR4Q05215 589 aa14.9□□□□□ -0.02
TPM1-219ENST00000559397 FOXF1Q12946 379 aa14.9□□□□□ -0.02
TPM1-219ENST00000559397 SLC10A1Q14973 349 aa14.9□□□□□ -0.02
TPM1-219ENST00000559397 ZNF324BQ6AW86 544 aaPredicted RBP14.9□□□□□ -0.02
TPM1-219ENST00000559397 GRINAQ7Z429 371 aa14.9□□□□□ -0.02
TPM1-219ENST00000559397 GTPBP8Q8N3Z3 284 aaPredicted RBP14.9□□□□□ -0.02
TPM1-219ENST00000559397 LSM14AQ8ND56 463 aaKnown RBP14.9□□□□□ -0.02
TPM1-219ENST00000559397 OR5M1Q8NGP8 315 aa14.9□□□□□ -0.02
TPM1-219ENST00000559397 LRR1Q96L50 414 aa14.9□□□□□ -0.02
TPM1-219ENST00000559397 MRGPRX4Q96LA9 322 aa14.9□□□□□ -0.02
TPM1-219ENST00000559397 ZNF582Q96NG8 517 aaPredicted RBP14.9□□□□□ -0.02
TPM1-219ENST00000559397 TNFRSF13CQ96RJ3 184 aa14.9□□□□□ -0.02
TPM1-219ENST00000559397 IL20RAQ9UHF4 553 aa14.9□□□□□ -0.02
TPM1-219ENST00000559397 RPH3AQ9Y2J0 694 aaPredicted RBP14.9□□□□□ -0.02
TPM1-219ENST00000559397 RPL36Q9Y3U8 105 aaKnown RBP14.9□□□□□ -0.02
TPM1-219ENST00000559397 TRAV27A0A087WT01 109 aa14.89□□□□□ -0.03
TPM1-219ENST00000559397 CRYABP02511 175 aaKnown RBP14.89□□□□□ -0.03
TPM1-219ENST00000559397 STSP08842 583 aa14.89□□□□□ -0.03
TPM1-219ENST00000559397 TCEA1P23193 301 aaKnown RBP14.89□□□□□ -0.03
TPM1-219ENST00000559397 ADH6P28332 368 aa14.89□□□□□ -0.03
TPM1-219ENST00000559397 C21orf33P30042 268 aaPredicted RBP14.89□□□□□ -0.03
TPM1-219ENST00000559397 ST3GAL4Q11206 333 aa14.89□□□□□ -0.03
TPM1-219ENST00000559397 IRF3Q14653 427 aa14.89□□□□□ -0.03
TPM1-219ENST00000559397 WIPI1Q5MNZ9 446 aaPredicted RBP14.89□□□□□ -0.03
TPM1-219ENST00000559397 CISD2Q8N5K1 135 aaKnown RBP14.89□□□□□ -0.03
TPM1-219ENST00000559397 OR51A7Q8NH64 312 aa14.89□□□□□ -0.03
TPM1-219ENST00000559397 OR14L1PQ8NHC6 308 aa14.89□□□□□ -0.03
TPM1-219ENST00000559397 DEFB127Q9H1M4 99 aa14.89□□□□□ -0.03
TPM1-219ENST00000559397 ACOT13Q9NPJ3 140 aa14.89□□□□□ -0.03
TPM1-219ENST00000559397 MRPS18AQ9NVS2 196 aaKnown RBP14.89□□□□□ -0.03
TPM1-219ENST00000559397 BAIAP2Q9UQB8 552 aa14.89□□□□□ -0.03
TPM1-219ENST00000559397 ZNF337Q9Y3M9 751 aa14.89□□□□□ -0.03
TPM1-219ENST00000559397 LIPGQ9Y5X9 500 aa14.89□□□□□ -0.03
TPM1-219ENST00000559397 MPDZO75970 2070 aa14.89□□□□□ -0.03
TPM1-219ENST00000559397 PRRC2CQ9Y520 2896 aaKnown RBP14.89□□□□□ -0.03
TPM1-219ENST00000559397 IGSF10Q6WRI0 2623 aa14.89□□□□□ -0.03
TPM1-219ENST00000559397 DBTP11182 482 aaKnown RBP14.88□□□□□ -0.03
TPM1-219ENST00000559397 ZNF17P17021 662 aa14.88□□□□□ -0.03
TPM1-219ENST00000559397 EIF1P41567 113 aaKnown RBP14.88□□□□□ -0.03
TPM1-219ENST00000559397 MAP2K4P45985 399 aa14.88□□□□□ -0.03
TPM1-219ENST00000559397 POLR2HP52434 150 aaKnown RBP14.88□□□□□ -0.03
TPM1-219ENST00000559397 RPS4XP62701 263 aaKnown RBP14.88□□□□□ -0.03
TPM1-219ENST00000559397 ZNF91Q05481 1191 aa14.88□□□□□ -0.03
TPM1-219ENST00000559397 ZNF74Q16587 644 aa14.88□□□□□ -0.03
TPM1-219ENST00000559397 CNPY1Q3B7I2 92 aa14.88□□□□□ -0.03
TPM1-219ENST00000559397 AADACL4Q5VUY2 407 aa14.88□□□□□ -0.03
TPM1-219ENST00000559397 FAM180AQ6UWF9 173 aa14.88□□□□□ -0.03
TPM1-219ENST00000559397 BCDIN3DQ7Z5W3 292 aaKnown RBP14.88□□□□□ -0.03
TPM1-219ENST00000559397 CDCA4Q9BXL8 241 aa14.88□□□□□ -0.03
TPM1-219ENST00000559397 TSPAN10Q9H1Z9 355 aaPredicted RBP14.88□□□□□ -0.03
TPM1-219ENST00000559397 OR2M5A3KFT3 312 aa14.87□□□□□ -0.03
TPM1-219ENST00000559397 ZNF701M0R085 212 aaPredicted RBP14.87□□□□□ -0.03
TPM1-219ENST00000559397 PRODHO43272 600 aa14.87□□□□□ -0.03
TPM1-219ENST00000559397 EFNA2O43921 213 aa14.87□□□□□ -0.03
TPM1-219ENST00000559397 NPIPB7O75200 414 aa14.87□□□□□ -0.03
TPM1-219ENST00000559397 INMTO95050 263 aa14.87□□□□□ -0.03
TPM1-219ENST00000559397 CH25HO95992 272 aa14.87□□□□□ -0.03
TPM1-219ENST00000559397 IGHG3P01860 377 aa14.87□□□□□ -0.03
TPM1-219ENST00000559397 CXCR1P25024 350 aa14.87□□□□□ -0.03
TPM1-219ENST00000559397 SLC6A6P31641 620 aa14.87□□□□□ -0.03
TPM1-219ENST00000559397 HTR3AP46098 478 aa14.87□□□□□ -0.03
TPM1-219ENST00000559397 GP2P55259 537 aaKnown RBP14.87□□□□□ -0.03
TPM1-219ENST00000559397 GFRA1P56159 465 aa14.87□□□□□ -0.03
TPM1-219ENST00000559397 TBCEQ15813 527 aaPredicted RBP14.87□□□□□ -0.03
TPM1-219ENST00000559397 SYT6Q5T7P8 510 aaPredicted RBP14.87□□□□□ -0.03
TPM1-219ENST00000559397 UBE2UQ5VVX9 321 aa14.87□□□□□ -0.03
TPM1-219ENST00000559397 RAET1LQ5VY80 246 aa14.87□□□□□ -0.03
TPM1-219ENST00000559397 ADGRG3Q86Y34 549 aa14.87□□□□□ -0.03
TPM1-219ENST00000559397 STX19Q8N4C7 294 aa14.87□□□□□ -0.03
TPM1-219ENST00000559397 LRRC17Q8N6Y2 441 aa14.87□□□□□ -0.03
TPM1-219ENST00000559397 ANKK1Q8NFD2 765 aa14.87□□□□□ -0.03
TPM1-219ENST00000559397 RORBQ92753 470 aa14.87□□□□□ -0.03
TPM1-219ENST00000559397 SNRNP40Q96DI7 357 aaKnown RBP14.87□□□□□ -0.03
TPM1-219ENST00000559397 PIGQQ9BRB3 760 aa14.87□□□□□ -0.03
TPM1-219ENST00000559397 SLC6A15Q9H2J7 730 aa14.87□□□□□ -0.03
TPM1-219ENST00000559397 FN3KQ9H479 309 aa14.87□□□□□ -0.03
TPM1-219ENST00000559397 CMC2Q9NRP2 79 aa14.87□□□□□ -0.03
TPM1-219ENST00000559397 PLSCR2Q9NRY7 297 aa14.87□□□□□ -0.03
TPM1-219ENST00000559397 GPR52Q9Y2T5 361 aa14.87□□□□□ -0.03
TPM1-219ENST00000559397 ZNF99A8MXY4 864 aaPredicted RBP14.87□□□□□ -0.03
TPM1-219ENST00000559397 LRRN3E7EW58 273 aa14.87□□□□□ -0.03
TPM1-219ENST00000559397 NPIPA5E9PKD4 350 aa14.87□□□□□ -0.03
TPM1-219ENST00000559397 NDUFB2O95178 105 aa14.87□□□□□ -0.03
TPM1-219ENST00000559397 FADS2O95864 444 aaKnown RBP14.87□□□□□ -0.03
TPM1-219ENST00000559397 ADRA2AP08913 450 aa14.87□□□□□ -0.03
TPM1-219ENST00000559397 IL11P20809 199 aa14.87□□□□□ -0.03
TPM1-219ENST00000559397 APOBEC1P41238 236 aaKnown RBP14.87□□□□□ -0.03
TPM1-219ENST00000559397 MLLT10P55197 1068 aa14.87□□□□□ -0.03
TPM1-219ENST00000559397 LTBQ06643 244 aa14.87□□□□□ -0.03
TPM1-219ENST00000559397 PRR30Q53SZ7 412 aaPredicted RBP14.87□□□□□ -0.03
TPM1-219ENST00000559397 ZNF362Q5T0B9 420 aaPredicted RBP14.87□□□□□ -0.03
TPM1-219ENST00000559397 TRILQ7L0X0 811 aa14.87□□□□□ -0.03
TPM1-219ENST00000559397 FCGR1BQ92637 280 aa14.87□□□□□ -0.03
TPM1-219ENST00000559397 PLEKHA8Q96JA3 519 aa14.87□□□□□ -0.03
TPM1-219ENST00000559397 BBC3Q96PG8 261 aaPredicted RBP14.87□□□□□ -0.03
TPM1-219ENST00000559397 IFT27Q9BW83 186 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms