RNA–Protein interactions for RNA: ENST00000558338.1

VPS13C-206, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 2

Gene VPS13C, Length 1,863 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-206ENST00000558338 LAT2Q9GZY6 243 aa6.64□□□□□ -1.35
VPS13C-206ENST00000558338 TP63Q9H3D4 680 aaPredicted RBP6.64□□□□□ -1.35
VPS13C-206ENST00000558338 ZCCHC4Q9H5U6 513 aa6.64□□□□□ -1.35
VPS13C-206ENST00000558338 ZNF576Q9H609 170 aa6.64□□□□□ -1.35
VPS13C-206ENST00000558338 NIPAL2Q9H841 368 aa6.64□□□□□ -1.35
VPS13C-206ENST00000558338 TCF7L1Q9HCS4 588 aa6.64□□□□□ -1.35
VPS13C-206ENST00000558338 NANSQ9NR45 359 aa6.64□□□□□ -1.35
VPS13C-206ENST00000558338 CUTCQ9NTM9 273 aa6.64□□□□□ -1.35
VPS13C-206ENST00000558338 NCDNQ9UBB6 729 aa6.64□□□□□ -1.35
VPS13C-206ENST00000558338 GNG8Q9UK08 70 aa6.64□□□□□ -1.35
VPS13C-206ENST00000558338 FBXL4Q9UKA2 621 aa6.64□□□□□ -1.35
VPS13C-206ENST00000558338 MRPS17Q9Y2R5 130 aaKnown RBP6.64□□□□□ -1.35
VPS13C-206ENST00000558338 ALG5Q9Y673 324 aa6.64□□□□□ -1.35
VPS13C-206ENST00000558338 MTCH2Q9Y6C9 303 aa6.64□□□□□ -1.35
VPS13C-206ENST00000558338 A0A1W2PQD3 144 aa6.63□□□□□ -1.35
VPS13C-206ENST00000558338 OR6C76A6NM76 312 aa6.63□□□□□ -1.35
VPS13C-206ENST00000558338 LRRN3E7EW58 273 aa6.63□□□□□ -1.35
VPS13C-206ENST00000558338 INMT-MINDY4F8WBC2 141 aa6.63□□□□□ -1.35
VPS13C-206ENST00000558338 GNB5O14775 395 aa6.63□□□□□ -1.35
VPS13C-206ENST00000558338 PHYHO14832 338 aa6.63□□□□□ -1.35
VPS13C-206ENST00000558338 CTDSPLO15194 276 aa6.63□□□□□ -1.35
VPS13C-206ENST00000558338 ARHGEF9O43307 516 aa6.63□□□□□ -1.35
VPS13C-206ENST00000558338 FZD7O75084 574 aa6.63□□□□□ -1.35
VPS13C-206ENST00000558338 ZNF432O94892 652 aa6.63□□□□□ -1.35
VPS13C-206ENST00000558338 UTS2O95399 124 aa6.63□□□□□ -1.35
VPS13C-206ENST00000558338 DHFRP00374 187 aa6.63□□□□□ -1.35
VPS13C-206ENST00000558338 RENP00797 406 aa6.63□□□□□ -1.35
VPS13C-206ENST00000558338 CLPSP04118 112 aa6.63□□□□□ -1.35
VPS13C-206ENST00000558338 HIST1H2ABP04908 130 aa6.63□□□□□ -1.35
VPS13C-206ENST00000558338 ALAS2P22557 587 aa6.63□□□□□ -1.35
VPS13C-206ENST00000558338 SLC6A1P30531 599 aa6.63□□□□□ -1.35
VPS13C-206ENST00000558338 NAA10P41227 235 aaPredicted RBP6.63□□□□□ -1.35
VPS13C-206ENST00000558338 ARL4DP49703 201 aa6.63□□□□□ -1.35
VPS13C-206ENST00000558338 MMP15P51511 669 aa6.63□□□□□ -1.35
VPS13C-206ENST00000558338 CCR4P51679 360 aa6.63□□□□□ -1.35
VPS13C-206ENST00000558338 NKX2-5P52952 324 aaPredicted RBP6.63□□□□□ -1.35
VPS13C-206ENST00000558338 SLC37A1P57057 533 aa6.63□□□□□ -1.35
VPS13C-206ENST00000558338 PSMA6P60900 246 aaKnown RBP6.63□□□□□ -1.35
VPS13C-206ENST00000558338 RPL6Q02878 288 aaKnown RBP6.63□□□□□ -1.35
VPS13C-206ENST00000558338 ERV3-1Q14264 604 aa6.63□□□□□ -1.35
VPS13C-206ENST00000558338 ELAVL1Q15717 326 aaKnown RBP6.63□□□□□ -1.35
VPS13C-206ENST00000558338 NDUFAF6Q330K2 333 aa6.63□□□□□ -1.35
VPS13C-206ENST00000558338 ALG10Q5BKT4 473 aa6.63□□□□□ -1.35
VPS13C-206ENST00000558338 UBE2NLQ5JXB2 153 aa6.63□□□□□ -1.35
VPS13C-206ENST00000558338 LEG1Q6P5S2 330 aa6.63□□□□□ -1.35
VPS13C-206ENST00000558338 UNQ9370/PRO34162Q6UXP9 181 aa6.63□□□□□ -1.35
VPS13C-206ENST00000558338 HIST3H2AQ7L7L0 130 aa6.63□□□□□ -1.35
VPS13C-206ENST00000558338 SSX6Q7RTT6 188 aa6.63□□□□□ -1.35
VPS13C-206ENST00000558338 SLC16A9Q7RTY1 509 aa6.63□□□□□ -1.35
VPS13C-206ENST00000558338 NANOGNBQ7Z5D8 188 aa6.63□□□□□ -1.35
VPS13C-206ENST00000558338 NR2C2APQ86WQ0 139 aa6.63□□□□□ -1.35
VPS13C-206ENST00000558338 SHISA5Q8N114 240 aa6.63□□□□□ -1.35
VPS13C-206ENST00000558338 C10orf53Q8N6V4 93 aa6.63□□□□□ -1.35
VPS13C-206ENST00000558338 ASCC1Q8N9N2 400 aaKnown RBP6.63□□□□□ -1.35
VPS13C-206ENST00000558338 OR6K6Q8NGW6 343 aa6.63□□□□□ -1.35
VPS13C-206ENST00000558338 OR4C3Q8NH37 302 aa6.63□□□□□ -1.35
VPS13C-206ENST00000558338 MOSPD2Q8NHP6 518 aa6.63□□□□□ -1.35
VPS13C-206ENST00000558338 ZNF563Q8TA94 476 aa6.63□□□□□ -1.35
VPS13C-206ENST00000558338 GRPEL2Q8TAA5 225 aa6.63□□□□□ -1.35
VPS13C-206ENST00000558338 AKAP1Q92667 903 aaKnown RBP eCLIP6.63□□□□□ -1.35
VPS13C-206ENST00000558338 DAZLQ92904 295 aaKnown RBP6.63□□□□□ -1.35
VPS13C-206ENST00000558338 HIST1H2ACQ93077 130 aa6.63□□□□□ -1.35
VPS13C-206ENST00000558338 NMNAT3Q96T66 252 aa6.63□□□□□ -1.35
VPS13C-206ENST00000558338 DDOQ99489 341 aa6.63□□□□□ -1.35
VPS13C-206ENST00000558338 SLITRK2Q9H156 845 aa6.63□□□□□ -1.35
VPS13C-206ENST00000558338 DPAGT1Q9H3H5 408 aa6.63□□□□□ -1.35
VPS13C-206ENST00000558338 LRRN3Q9H3W5 708 aa6.63□□□□□ -1.35
VPS13C-206ENST00000558338 FKRPQ9H9S5 495 aa6.63□□□□□ -1.35
VPS13C-206ENST00000558338 PNO1Q9NRX1 252 aaKnown RBP6.63□□□□□ -1.35
VPS13C-206ENST00000558338 LANCL2Q9NS86 450 aa6.63□□□□□ -1.35
VPS13C-206ENST00000558338 RXFP3Q9NSD7 469 aa6.63□□□□□ -1.35
VPS13C-206ENST00000558338 NLKQ9UBE8 527 aa6.63□□□□□ -1.35
VPS13C-206ENST00000558338 NUFIP1Q9UHK0 495 aaKnown RBP6.63□□□□□ -1.35
VPS13C-206ENST00000558338 SPATA2Q9UM82 520 aa6.63□□□□□ -1.35
VPS13C-206ENST00000558338 CAMK2AQ9UQM7 478 aa6.63□□□□□ -1.35
VPS13C-206ENST00000558338 NUBP2Q9Y5Y2 271 aa6.63□□□□□ -1.35
VPS13C-206ENST00000558338 CACNG2Q9Y698 323 aa6.63□□□□□ -1.35
VPS13C-206ENST00000558338 CLCA3PQ9Y6N3 262 aa6.63□□□□□ -1.35
VPS13C-206ENST00000558338 IGKV1D-42A0A075B6H8 117 aa6.62□□□□□ -1.35
VPS13C-206ENST00000558338 A0A0B4J293 547 aa6.62□□□□□ -1.35
VPS13C-206ENST00000558338 IGHV5-51A0A0C4DH38 117 aa6.62□□□□□ -1.35
VPS13C-206ENST00000558338 TEX13CA0A0J9YWL9 993 aa6.62□□□□□ -1.35
VPS13C-206ENST00000558338 A0A1B0GVC2 190 aa6.62□□□□□ -1.35
VPS13C-206ENST00000558338 FAM47E-STBD1D6RA91 191 aa6.62□□□□□ -1.35
VPS13C-206ENST00000558338 GSTZ1O43708 216 aaPredicted RBP6.62□□□□□ -1.35
VPS13C-206ENST00000558338 DUX1O43812 170 aa6.62□□□□□ -1.35
VPS13C-206ENST00000558338 HYAL3O43820 417 aaPredicted RBP6.62□□□□□ -1.35
VPS13C-206ENST00000558338 CDC40O60508 579 aaKnown RBP eCLIP6.62□□□□□ -1.35
VPS13C-206ENST00000558338 EIF4E2O60573 245 aaKnown RBP6.62□□□□□ -1.35
VPS13C-206ENST00000558338 SELENOFO60613 162 aa6.62□□□□□ -1.35
VPS13C-206ENST00000558338 OR2B3O76000 313 aa6.62□□□□□ -1.35
VPS13C-206ENST00000558338 WNT1P04628 370 aa6.62□□□□□ -1.35
VPS13C-206ENST00000558338 EPXP11678 715 aa6.62□□□□□ -1.35
VPS13C-206ENST00000558338 ARSBP15848 533 aa6.62□□□□□ -1.35
VPS13C-206ENST00000558338 FBLP22087 321 aaKnown RBP6.62□□□□□ -1.35
VPS13C-206ENST00000558338 AHCYP23526 432 aa6.62□□□□□ -1.35
VPS13C-206ENST00000558338 IL12BP29460 328 aa6.62□□□□□ -1.35
VPS13C-206ENST00000558338 CENPAP49450 140 aa6.62□□□□□ -1.35
VPS13C-206ENST00000558338 GFERP55789 205 aa6.62□□□□□ -1.35
VPS13C-206ENST00000558338 OR10A3P58181 314 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms