RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 CXCL12P48061 93 aa12.98□□□□□ -0.33
SPG11-210ENST00000558319 DAPP51397 102 aa12.98□□□□□ -0.33
SPG11-210ENST00000558319 OR2B8PP59922 312 aa12.98□□□□□ -0.33
SPG11-210ENST00000558319 GRB2P62993 217 aaKnown RBP12.98□□□□□ -0.33
SPG11-210ENST00000558319 LTB4RQ15722 352 aa12.98□□□□□ -0.33
SPG11-210ENST00000558319 MANEAQ5SRI9 462 aa12.98□□□□□ -0.33
SPG11-210ENST00000558319 RNLSQ5VYX0 342 aa12.98□□□□□ -0.33
SPG11-210ENST00000558319 ARFGAP1Q8N6T3 406 aa12.98□□□□□ -0.33
SPG11-210ENST00000558319 SECTM1Q8WVN6 248 aa12.98□□□□□ -0.33
SPG11-210ENST00000558319 C1QTNF2Q9BXJ5 285 aa12.98□□□□□ -0.33
SPG11-210ENST00000558319 CCL26Q9Y258 94 aa12.98□□□□□ -0.33
SPG11-210ENST00000558319 NID2Q14112 1375 aa12.98□□□□□ -0.33
SPG11-210ENST00000558319 A0A0J9YY10 115 aa12.98□□□□□ -0.33
SPG11-210ENST00000558319 TCRBP04435 133 aa12.98□□□□□ -0.33
SPG11-210ENST00000558319 TFAP2AP05549 437 aa12.98□□□□□ -0.33
SPG11-210ENST00000558319 TRHRP34981 398 aaPredicted RBP12.98□□□□□ -0.33
SPG11-210ENST00000558319 PTGER4P35408 488 aa12.98□□□□□ -0.33
SPG11-210ENST00000558319 POU3F1Q03052 451 aaPredicted RBP12.98□□□□□ -0.33
SPG11-210ENST00000558319 GPR18Q14330 331 aa12.98□□□□□ -0.33
SPG11-210ENST00000558319 C4orf17Q53FE4 359 aa12.98□□□□□ -0.33
SPG11-210ENST00000558319 IL34Q6ZMJ4 242 aa12.98□□□□□ -0.33
SPG11-210ENST00000558319 NLRC3Q7RTR2 1065 aa12.98□□□□□ -0.33
SPG11-210ENST00000558319 SMIM15Q7Z3B0 74 aa12.98□□□□□ -0.33
SPG11-210ENST00000558319 OR5AS1Q8N127 324 aa12.98□□□□□ -0.33
SPG11-210ENST00000558319 HSD17B11Q8NBQ5 300 aa12.98□□□□□ -0.33
SPG11-210ENST00000558319 LMO3Q8TAP4 145 aa12.98□□□□□ -0.33
SPG11-210ENST00000558319 C12orf57Q99622 126 aa12.98□□□□□ -0.33
SPG11-210ENST00000558319 OR10A5Q9H207 317 aa12.98□□□□□ -0.33
SPG11-210ENST00000558319 OR10A2Q9H208 303 aa12.98□□□□□ -0.33
SPG11-210ENST00000558319 IL26Q9NPH9 171 aa12.98□□□□□ -0.33
SPG11-210ENST00000558319 DMRT3Q9NQL9 472 aa12.98□□□□□ -0.33
SPG11-210ENST00000558319 MCTS1Q9ULC4 181 aaKnown RBP12.98□□□□□ -0.33
SPG11-210ENST00000558319 ADAM12O43184 909 aa12.98□□□□□ -0.33
SPG11-210ENST00000558319 DAP3P51398 398 aaKnown RBP12.98□□□□□ -0.33
SPG11-210ENST00000558319 TXLNGYQ9BZA5 131 aa12.98□□□□□ -0.33
SPG11-210ENST00000558319 MTCH1Q9NZJ7 389 aa12.98□□□□□ -0.33
SPG11-210ENST00000558319 GJE1A6NN92 205 aa12.98□□□□□ -0.33
SPG11-210ENST00000558319 PRKNO60260 465 aaPredicted RBP12.98□□□□□ -0.33
SPG11-210ENST00000558319 BCKDHBP21953 392 aa12.98□□□□□ -0.33
SPG11-210ENST00000558319 LAP3P28838 519 aa12.98□□□□□ -0.33
SPG11-210ENST00000558319 SLC1A3P43003 542 aa12.98□□□□□ -0.33
SPG11-210ENST00000558319 TVP23CQ96ET8 276 aa12.98□□□□□ -0.33
SPG11-210ENST00000558319 PRR14Q9BWN1 585 aa12.98□□□□□ -0.33
SPG11-210ENST00000558319 HRASLSQ9HDD0 168 aa12.98□□□□□ -0.33
SPG11-210ENST00000558319 FBXO8Q9NRD0 319 aa12.98□□□□□ -0.33
SPG11-210ENST00000558319 CNOT2Q9NZN8 540 aaKnown RBP12.98□□□□□ -0.33
SPG11-210ENST00000558319 HRH3Q9Y5N1 445 aa12.98□□□□□ -0.33
SPG11-210ENST00000558319 ANKRD26Q9UPS8 1709 aa12.97□□□□□ -0.33
SPG11-210ENST00000558319 GON4LQ3T8J9 2241 aa12.97□□□□□ -0.33
SPG11-210ENST00000558319 TMEM269A0A1B0GVZ9 245 aa12.97□□□□□ -0.33
SPG11-210ENST00000558319 HNRNPA1P09651 372 aaKnown RBP eCLIP12.97□□□□□ -0.33
SPG11-210ENST00000558319 CLEC2LP0C7M8 214 aa12.97□□□□□ -0.33
SPG11-210ENST00000558319 OR8G3PP0DMU2 310 aa12.97□□□□□ -0.33
SPG11-210ENST00000558319 IVDP26440 423 aa12.97□□□□□ -0.33
SPG11-210ENST00000558319 VAMP3Q15836 100 aa12.97□□□□□ -0.33
SPG11-210ENST00000558319 RBMS3Q6XE24 437 aaKnown RBP12.97□□□□□ -0.33
SPG11-210ENST00000558319 ACOT4Q8N9L9 421 aa12.97□□□□□ -0.33
SPG11-210ENST00000558319 ST8SIA4Q92187 359 aa12.97□□□□□ -0.33
SPG11-210ENST00000558319 SGPP1Q9BX95 441 aa12.97□□□□□ -0.33
SPG11-210ENST00000558319 HSD17B6O14756 317 aa12.97□□□□□ -0.33
SPG11-210ENST00000558319 OR2T1O43869 369 aa12.97□□□□□ -0.33
SPG11-210ENST00000558319 NME2P1O60361 137 aa12.97□□□□□ -0.33
SPG11-210ENST00000558319 IMPA1P29218 277 aa12.97□□□□□ -0.33
SPG11-210ENST00000558319 MFGE8Q08431 387 aaPredicted RBP12.97□□□□□ -0.33
SPG11-210ENST00000558319 GAREM2Q75VX8 874 aa12.97□□□□□ -0.33
SPG11-210ENST00000558319 NAA40Q86UY6 237 aa12.97□□□□□ -0.33
SPG11-210ENST00000558319 LYSMD2Q8IV50 215 aa12.97□□□□□ -0.33
SPG11-210ENST00000558319 ACPTQ9BZG2 426 aa12.97□□□□□ -0.33
SPG11-210ENST00000558319 CHST11Q9NPF2 352 aa12.97□□□□□ -0.33
SPG11-210ENST00000558319 RNASET2O00584 256 aaKnown RBP12.97□□□□□ -0.33
SPG11-210ENST00000558319 DPP4P27487 766 aa12.97□□□□□ -0.33
SPG11-210ENST00000558319 TRIM23P36406 574 aa12.97□□□□□ -0.33
SPG11-210ENST00000558319 MNX1P50219 401 aaPredicted RBP12.97□□□□□ -0.33
SPG11-210ENST00000558319 ARL6IP1Q15041 203 aa12.97□□□□□ -0.33
SPG11-210ENST00000558319 HACD4Q5VWC8 232 aa12.97□□□□□ -0.33
SPG11-210ENST00000558319 OTPQ5XKR4 325 aa12.97□□□□□ -0.33
SPG11-210ENST00000558319 FAM174AQ8TBP5 190 aa12.97□□□□□ -0.33
SPG11-210ENST00000558319 MAF1Q9H063 256 aa12.97□□□□□ -0.33
SPG11-210ENST00000558319 GORASP2Q9H8Y8 452 aa12.97□□□□□ -0.33
SPG11-210ENST00000558319 ZNF281Q9Y2X9 895 aa12.97□□□□□ -0.33
SPG11-210ENST00000558319 TRAF3IP2O43734 574 aaPredicted RBP12.97□□□□□ -0.33
SPG11-210ENST00000558319 CSO75390 466 aaKnown RBP12.97□□□□□ -0.33
SPG11-210ENST00000558319 CLDN1O95832 211 aa12.97□□□□□ -0.33
SPG11-210ENST00000558319 PSMB1P20618 241 aaKnown RBP12.97□□□□□ -0.33
SPG11-210ENST00000558319 ZNF91Q05481 1191 aa12.97□□□□□ -0.33
SPG11-210ENST00000558319 RUNX2Q13950 521 aa12.97□□□□□ -0.33
SPG11-210ENST00000558319 EDDM3AQ14507 147 aa12.97□□□□□ -0.33
SPG11-210ENST00000558319 TBCEQ15813 527 aaPredicted RBP12.97□□□□□ -0.33
SPG11-210ENST00000558319 PGGHGQ32M88 737 aa12.97□□□□□ -0.33
SPG11-210ENST00000558319 DPPA4Q7L190 304 aa12.97□□□□□ -0.33
SPG11-210ENST00000558319 FAM122BQ7Z309 247 aa12.97□□□□□ -0.33
SPG11-210ENST00000558319 LINC00346Q8IVM7 164 aa12.97□□□□□ -0.33
SPG11-210ENST00000558319 ADAMTS16Q8TE57 1224 aa12.97□□□□□ -0.33
SPG11-210ENST00000558319 HHATLQ9HCP6 504 aa12.97□□□□□ -0.33
SPG11-210ENST00000558319 TAAR2Q9P1P5 351 aa12.97□□□□□ -0.33
SPG11-210ENST00000558319 SUSD2Q9UGT4 822 aa12.97□□□□□ -0.33
SPG11-210ENST00000558319 ZCWPW2A0A1B0GU75 182 aa12.97□□□□□ -0.33
SPG11-210ENST00000558319 GRPP07492 148 aa12.97□□□□□ -0.33
SPG11-210ENST00000558319 OR10J4P0C629 311 aa12.97□□□□□ -0.33
SPG11-210ENST00000558319 NTF3P20783 257 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms