RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 ZNF730Q6ZMV8 503 aa22.68■■□□□ 1.22
SMAD6-202ENST00000557916 SLC46A3Q7Z3Q1 461 aa22.68■■□□□ 1.22
SMAD6-202ENST00000557916 STK32CQ86UX6 486 aa22.68■■□□□ 1.22
SMAD6-202ENST00000557916 SPATA24Q86W54 205 aa22.68■■□□□ 1.22
SMAD6-202ENST00000557916 RNF113BQ8IZP6 322 aaKnown RBP22.68■■□□□ 1.22
SMAD6-202ENST00000557916 OR5J2Q8NH18 312 aa22.68■■□□□ 1.22
SMAD6-202ENST00000557916 SLC7A13Q8TCU3 470 aa22.68■■□□□ 1.22
SMAD6-202ENST00000557916 RNASE6Q93091 150 aaKnown RBP22.68■■□□□ 1.22
SMAD6-202ENST00000557916 NPDC1Q9NQX5 325 aaPredicted RBP22.68■■□□□ 1.22
SMAD6-202ENST00000557916 ZNF229Q9UJW7 825 aa22.68■■□□□ 1.22
SMAD6-202ENST00000557916 PTPN13Q12923 2485 aa22.68■■□□□ 1.22
SMAD6-202ENST00000557916 SMIM11AP58511 58 aa22.67■■□□□ 1.22
SMAD6-202ENST00000557916 IL1RL1Q01638 556 aa22.67■■□□□ 1.22
SMAD6-202ENST00000557916 SPIBQ01892 262 aa22.67■■□□□ 1.22
SMAD6-202ENST00000557916 PODNL1Q6PEZ8 512 aa22.67■■□□□ 1.22
SMAD6-202ENST00000557916 TBPL2Q6SJ96 375 aa22.67■■□□□ 1.22
SMAD6-202ENST00000557916 MBOAT2Q6ZWT7 520 aa22.67■■□□□ 1.22
SMAD6-202ENST00000557916 RRM2BQ7LG56 351 aa22.67■■□□□ 1.22
SMAD6-202ENST00000557916 NRMQ8IXM6 262 aa22.67■■□□□ 1.22
SMAD6-202ENST00000557916 LRRC17Q8N6Y2 441 aa22.67■■□□□ 1.22
SMAD6-202ENST00000557916 OR52J3Q8NH60 311 aa22.67■■□□□ 1.22
SMAD6-202ENST00000557916 DHRS1Q96LJ7 313 aa22.67■■□□□ 1.22
SMAD6-202ENST00000557916 OXGR1Q96P68 337 aa22.67■■□□□ 1.22
SMAD6-202ENST00000557916 FOXD3Q9UJU5 478 aaPredicted RBP22.67■■□□□ 1.22
SMAD6-202ENST00000557916 DHRS12A0PJE2 317 aa22.66■■□□□ 1.22
SMAD6-202ENST00000557916 HTR3EA5X5Y0 456 aa22.66■■□□□ 1.22
SMAD6-202ENST00000557916 MS4A18H0YCH9 400 aa22.66■■□□□ 1.22
SMAD6-202ENST00000557916 PLPP3O14495 311 aa22.66■■□□□ 1.22
SMAD6-202ENST00000557916 OR7A10O76100 309 aa22.66■■□□□ 1.22
SMAD6-202ENST00000557916 GADD45GO95257 159 aa22.66■■□□□ 1.22
SMAD6-202ENST00000557916 HIST1H2ABP04908 130 aa22.66■■□□□ 1.22
SMAD6-202ENST00000557916 ASAH2BP0C7U1 165 aa22.66■■□□□ 1.22
SMAD6-202ENST00000557916 IFI30P13284 250 aa22.66■■□□□ 1.22
SMAD6-202ENST00000557916 FUT1P19526 365 aa22.66■■□□□ 1.22
SMAD6-202ENST00000557916 POU4F3Q15319 338 aa22.66■■□□□ 1.22
SMAD6-202ENST00000557916 MS4A18Q3C1V0 323 aa22.66■■□□□ 1.22
SMAD6-202ENST00000557916 TFAP2EQ6VUC0 442 aa22.66■■□□□ 1.22
SMAD6-202ENST00000557916 HIST3H2AQ7L7L0 130 aa22.66■■□□□ 1.22
SMAD6-202ENST00000557916 ZNF100Q8IYN0 542 aa22.66■■□□□ 1.22
SMAD6-202ENST00000557916 ADGRG5Q8IZF4 528 aa22.66■■□□□ 1.22
SMAD6-202ENST00000557916 ZIC4Q8N9L1 334 aa22.66■■□□□ 1.22
SMAD6-202ENST00000557916 CANT1Q8WVQ1 401 aa22.66■■□□□ 1.22
SMAD6-202ENST00000557916 HIST1H2ACQ93077 130 aa22.66■■□□□ 1.22
SMAD6-202ENST00000557916 BPIFA2Q96DR5 249 aa22.66■■□□□ 1.22
SMAD6-202ENST00000557916 B3GAT1Q9P2W7 334 aa22.66■■□□□ 1.22
SMAD6-202ENST00000557916 AURKCQ9UQB9 309 aa22.66■■□□□ 1.22
SMAD6-202ENST00000557916 MRPL33O75394 65 aaKnown RBP22.65■■□□□ 1.22
SMAD6-202ENST00000557916 RAP2AP10114 183 aa22.65■■□□□ 1.22
SMAD6-202ENST00000557916 ZNF43P17038 809 aa22.65■■□□□ 1.22
SMAD6-202ENST00000557916 RRM2P31350 389 aa22.65■■□□□ 1.22
SMAD6-202ENST00000557916 NTF4P34130 210 aa22.65■■□□□ 1.22
SMAD6-202ENST00000557916 OR3A2P47893 321 aa22.65■■□□□ 1.22
SMAD6-202ENST00000557916 PRKCDQ05655 676 aa22.65■■□□□ 1.22
SMAD6-202ENST00000557916 C1DQ13901 141 aaKnown RBP22.65■■□□□ 1.22
SMAD6-202ENST00000557916 EXOC3L2Q2M3D2 409 aa22.65■■□□□ 1.22
SMAD6-202ENST00000557916 SP5Q6BEB4 398 aaPredicted RBP22.65■■□□□ 1.22
SMAD6-202ENST00000557916 CREB3L2Q70SY1 520 aa22.65■■□□□ 1.22
SMAD6-202ENST00000557916 ZC3HAV1Q7Z2W4 902 aaKnown RBP22.65■■□□□ 1.22
SMAD6-202ENST00000557916 EPHX4Q8IUS5 362 aa22.65■■□□□ 1.22
SMAD6-202ENST00000557916 ZNF385AQ96PM9 386 aaKnown RBP22.65■■□□□ 1.22
SMAD6-202ENST00000557916 PARPBPQ9NWS1 579 aa22.65■■□□□ 1.22
SMAD6-202ENST00000557916 GALNT8Q9NY28 637 aa22.65■■□□□ 1.22
SMAD6-202ENST00000557916 TRBV4-1A0A0J9YWV2 114 aa22.65■■□□□ 1.22
SMAD6-202ENST00000557916 LOC102725191A0A1B0GVB3 256 aa22.65■■□□□ 1.22
SMAD6-202ENST00000557916 TCRBV3S1A0A5B6 114 aa22.65■■□□□ 1.22
SMAD6-202ENST00000557916 OR6A2O95222 327 aa22.65■■□□□ 1.22
SMAD6-202ENST00000557916 HPRP00739 348 aa22.65■■□□□ 1.22
SMAD6-202ENST00000557916 ADORA3P0DMS8 318 aa22.65■■□□□ 1.22
SMAD6-202ENST00000557916 AHCYP23526 432 aa22.65■■□□□ 1.22
SMAD6-202ENST00000557916 EDNRAP25101 427 aa22.65■■□□□ 1.22
SMAD6-202ENST00000557916 COL8A1P27658 744 aa22.65■■□□□ 1.22
SMAD6-202ENST00000557916 ERFP50548 548 aa22.65■■□□□ 1.22
SMAD6-202ENST00000557916 PUDPQ08623 228 aa22.65■■□□□ 1.22
SMAD6-202ENST00000557916 LIPHQ8WWY8 451 aa22.65■■□□□ 1.22
SMAD6-202ENST00000557916 TMEM45BQ96B21 275 aa22.65■■□□□ 1.22
SMAD6-202ENST00000557916 APH1AQ96BI3 265 aa22.65■■□□□ 1.22
SMAD6-202ENST00000557916 CHID1Q9BWS9 393 aa22.65■■□□□ 1.22
SMAD6-202ENST00000557916 C1orf146Q5VVC0 180 aa22.64■■□□□ 1.21
SMAD6-202ENST00000557916 CASP12Q6UXS9 341 aa22.64■■□□□ 1.21
SMAD6-202ENST00000557916 BEND4Q6ZU67 534 aa22.64■■□□□ 1.21
SMAD6-202ENST00000557916 NANOGNBQ7Z5D8 188 aa22.64■■□□□ 1.21
SMAD6-202ENST00000557916 UEVLDQ8IX04 471 aa22.64■■□□□ 1.21
SMAD6-202ENST00000557916 CDK20Q8IZL9 346 aa22.64■■□□□ 1.21
SMAD6-202ENST00000557916 UTP4Q969X6 686 aaKnown RBP22.64■■□□□ 1.21
SMAD6-202ENST00000557916 ELOVL5Q9NYP7 299 aa22.64■■□□□ 1.21
SMAD6-202ENST00000557916 TAS2R5Q9NYW4 299 aa22.64■■□□□ 1.21
SMAD6-202ENST00000557916 HCFC1P51610 2035 aa22.63■■□□□ 1.21
SMAD6-202ENST00000557916 HECTD1Q9ULT8 2610 aa22.63■■□□□ 1.21
SMAD6-202ENST00000557916 BLOC1S5-TXNDC5H3BN57 136 aa22.63■■□□□ 1.21
SMAD6-202ENST00000557916 CIB2O75838 187 aa22.63■■□□□ 1.21
SMAD6-202ENST00000557916 HOXB6P17509 224 aaKnown RBP22.63■■□□□ 1.21
SMAD6-202ENST00000557916 CD79BP40259 229 aa22.63■■□□□ 1.21
SMAD6-202ENST00000557916 SEC23BQ15437 767 aa22.63■■□□□ 1.21
SMAD6-202ENST00000557916 AAED1Q7RTV5 226 aa22.63■■□□□ 1.21
SMAD6-202ENST00000557916 MEX3DQ86XN8 651 aaKnown RBP22.63■■□□□ 1.21
SMAD6-202ENST00000557916 KIF18BQ86Y91 864 aa22.63■■□□□ 1.21
SMAD6-202ENST00000557916 FUZQ9BT04 418 aa22.63■■□□□ 1.21
SMAD6-202ENST00000557916 PRSS50Q9UI38 385 aa22.63■■□□□ 1.21
SMAD6-202ENST00000557916 NOX1Q9Y5S8 564 aa22.63■■□□□ 1.21
SMAD6-202ENST00000557916 ADGRG4Q8IZF6 3080 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms