RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 KDM8Q8N371 416 aa13.84□□□□□ -0.19
SCFD1-224ENST00000557713 ANKK1Q8NFD2 765 aa13.84□□□□□ -0.19
SCFD1-224ENST00000557713 NUP37Q8NFH4 326 aa13.84□□□□□ -0.19
SCFD1-224ENST00000557713 OR4F15Q8NGB8 312 aa13.84□□□□□ -0.19
SCFD1-224ENST00000557713 SOX7Q9BT81 388 aa13.84□□□□□ -0.19
SCFD1-224ENST00000557713 PTDSS2Q9BVG9 487 aa13.84□□□□□ -0.19
SCFD1-224ENST00000557713 TPT1P8Q9HAU6 139 aa13.84□□□□□ -0.19
SCFD1-224ENST00000557713 MOV10Q9HCE1 1003 aaKnown RBP13.84□□□□□ -0.19
SCFD1-224ENST00000557713 KCNK9Q9NPC2 374 aa13.84□□□□□ -0.19
SCFD1-224ENST00000557713 ZNF232Q9UNY5 417 aa13.84□□□□□ -0.19
SCFD1-224ENST00000557713 HDAC3O15379 428 aa13.83□□□□□ -0.2
SCFD1-224ENST00000557713 FZD7O75084 574 aa13.83□□□□□ -0.2
SCFD1-224ENST00000557713 SLC22A3O75751 556 aa13.83□□□□□ -0.2
SCFD1-224ENST00000557713 STAMBPO95630 424 aa13.83□□□□□ -0.2
SCFD1-224ENST00000557713 PNMTP11086 282 aa13.83□□□□□ -0.2
SCFD1-224ENST00000557713 CBR1P16152 277 aa13.83□□□□□ -0.2
SCFD1-224ENST00000557713 GIFP27352 417 aa13.83□□□□□ -0.2
SCFD1-224ENST00000557713 DSTNP60981 165 aa13.83□□□□□ -0.2
SCFD1-224ENST00000557713 ARF1P84077 181 aaKnown RBP13.83□□□□□ -0.2
SCFD1-224ENST00000557713 ROR2Q01974 943 aaKnown RBP13.83□□□□□ -0.2
SCFD1-224ENST00000557713 IQCCQ4KMZ1 466 aa13.83□□□□□ -0.2
SCFD1-224ENST00000557713 PDCD4Q53EL6 469 aaKnown RBP13.83□□□□□ -0.2
SCFD1-224ENST00000557713 RPS26P11Q5JNZ5 115 aaPredicted RBP13.83□□□□□ -0.2
SCFD1-224ENST00000557713 VHLLQ6RSH7 139 aa13.83□□□□□ -0.2
SCFD1-224ENST00000557713 SERPINA11Q86U17 422 aa13.83□□□□□ -0.2
SCFD1-224ENST00000557713 MYPOPQ86VE0 399 aaPredicted RBP13.83□□□□□ -0.2
SCFD1-224ENST00000557713 SLC25A36Q96CQ1 311 aa13.83□□□□□ -0.2
SCFD1-224ENST00000557713 TRIM44Q96DX7 344 aaPredicted RBP13.83□□□□□ -0.2
SCFD1-224ENST00000557713 TMEM19Q96HH6 336 aa13.83□□□□□ -0.2
SCFD1-224ENST00000557713 DOK1Q99704 481 aa13.83□□□□□ -0.2
SCFD1-224ENST00000557713 BPESC1Q9GZL8 116 aa13.83□□□□□ -0.2
SCFD1-224ENST00000557713 RAB1BQ9H0U4 201 aa13.83□□□□□ -0.2
SCFD1-224ENST00000557713 ZNF442Q9H7R0 627 aa13.83□□□□□ -0.2
SCFD1-224ENST00000557713 FBXO9Q9UK97 447 aaPredicted RBP13.83□□□□□ -0.2
SCFD1-224ENST00000557713 TMEM129A0AVI4 362 aa13.82□□□□□ -0.2
SCFD1-224ENST00000557713 TRPC5OSA6NMA1 111 aa13.82□□□□□ -0.2
SCFD1-224ENST00000557713 SNNO75324 88 aaPredicted RBP13.82□□□□□ -0.2
SCFD1-224ENST00000557713 AHSA1O95433 338 aa13.82□□□□□ -0.2
SCFD1-224ENST00000557713 CELA3BP08861 270 aa13.82□□□□□ -0.2
SCFD1-224ENST00000557713 HNF1AP20823 631 aa13.82□□□□□ -0.2
SCFD1-224ENST00000557713 THBS4P35443 961 aa13.82□□□□□ -0.2
SCFD1-224ENST00000557713 SH3BGRP55822 239 aaPredicted RBP13.82□□□□□ -0.2
SCFD1-224ENST00000557713 CLDN17P56750 224 aa13.82□□□□□ -0.2
SCFD1-224ENST00000557713 SLC35B4Q969S0 331 aa13.82□□□□□ -0.2
SCFD1-224ENST00000557713 KTI12Q96EK9 354 aaPredicted RBP13.82□□□□□ -0.2
SCFD1-224ENST00000557713 MAELQ96JY0 434 aaKnown RBP13.82□□□□□ -0.2
SCFD1-224ENST00000557713 ARMC7Q9H6L4 198 aa13.82□□□□□ -0.2
SCFD1-224ENST00000557713 THUMPD1Q9NXG2 353 aaKnown RBP13.82□□□□□ -0.2
SCFD1-224ENST00000557713 B3GAT1Q9P2W7 334 aa13.82□□□□□ -0.2
SCFD1-224ENST00000557713 SEC14L4Q9UDX3 406 aa13.82□□□□□ -0.2
SCFD1-224ENST00000557713 RCE1Q9Y256 329 aa13.82□□□□□ -0.2
SCFD1-224ENST00000557713 IFT52Q9Y366 437 aa13.82□□□□□ -0.2
SCFD1-224ENST00000557713 ZNF503-AS2A6NEH8 195 aa13.81□□□□□ -0.2
SCFD1-224ENST00000557713 ANP32DO95626 131 aa13.81□□□□□ -0.2
SCFD1-224ENST00000557713 IGFBP1P08833 259 aaPredicted RBP13.81□□□□□ -0.2
SCFD1-224ENST00000557713 TACSTD2P09758 323 aa13.81□□□□□ -0.2
SCFD1-224ENST00000557713 IDO1P14902 403 aa13.81□□□□□ -0.2
SCFD1-224ENST00000557713 DAOP14920 347 aa13.81□□□□□ -0.2
SCFD1-224ENST00000557713 ZNF43P17038 809 aa13.81□□□□□ -0.2
SCFD1-224ENST00000557713 NPR2P20594 1047 aa13.81□□□□□ -0.2
SCFD1-224ENST00000557713 RPS5P46782 204 aaKnown RBP13.81□□□□□ -0.2
SCFD1-224ENST00000557713 WDR4P57081 412 aaKnown RBP13.81□□□□□ -0.2
SCFD1-224ENST00000557713 HOXC5Q00444 222 aa13.81□□□□□ -0.2
SCFD1-224ENST00000557713 SQLEQ14534 574 aa13.81□□□□□ -0.2
SCFD1-224ENST00000557713 CR1LQ2VPA4 569 aa13.81□□□□□ -0.2
SCFD1-224ENST00000557713 GTDC1Q4AE62 458 aa13.81□□□□□ -0.2
SCFD1-224ENST00000557713 ZNF311Q5JNZ3 666 aa13.81□□□□□ -0.2
SCFD1-224ENST00000557713 ATG16L1Q676U5 607 aa13.81□□□□□ -0.2
SCFD1-224ENST00000557713 ZCCHC24Q8N2G6 241 aaKnown RBP13.81□□□□□ -0.2
SCFD1-224ENST00000557713 NEU4Q8WWR8 484 aaPredicted RBP13.81□□□□□ -0.2
SCFD1-224ENST00000557713 VPS33AQ96AX1 596 aa13.81□□□□□ -0.2
SCFD1-224ENST00000557713 ZNF837Q96EG3 531 aaPredicted RBP13.81□□□□□ -0.2
SCFD1-224ENST00000557713 OXGR1Q96P68 337 aa13.81□□□□□ -0.2
SCFD1-224ENST00000557713 PAIP2Q9BPZ3 127 aaKnown RBP13.81□□□□□ -0.2
SCFD1-224ENST00000557713 RSPO3Q9BXY4 272 aaPredicted RBP13.81□□□□□ -0.2
SCFD1-224ENST00000557713 GPR35Q9HC97 309 aa13.81□□□□□ -0.2
SCFD1-224ENST00000557713 BCL2L10Q9HD36 194 aa13.81□□□□□ -0.2
SCFD1-224ENST00000557713 THAP1Q9NVV9 213 aa13.81□□□□□ -0.2
SCFD1-224ENST00000557713 IGHV2OR16-5A0A0B4J2B6 119 aa13.8□□□□□ -0.2
SCFD1-224ENST00000557713 LOC102725191A0A1B0GVB3 256 aa13.8□□□□□ -0.2
SCFD1-224ENST00000557713 LRP5LA4QPB2 252 aa13.8□□□□□ -0.2
SCFD1-224ENST00000557713 VSTM5A8MXK1 200 aa13.8□□□□□ -0.2
SCFD1-224ENST00000557713 hCG_2039718K7EN88 272 aa13.8□□□□□ -0.2
SCFD1-224ENST00000557713 LILRA1O75019 489 aa13.8□□□□□ -0.2
SCFD1-224ENST00000557713 SLC43A1O75387 559 aa13.8□□□□□ -0.2
SCFD1-224ENST00000557713 NUDT7P0C024 238 aa13.8□□□□□ -0.2
SCFD1-224ENST00000557713 KITP10721 976 aa13.8□□□□□ -0.2
SCFD1-224ENST00000557713 ARR3P36575 388 aa13.8□□□□□ -0.2
SCFD1-224ENST00000557713 HHATQ5VTY9 493 aa13.8□□□□□ -0.2
SCFD1-224ENST00000557713 C6orf89Q6UWU4 347 aa13.8□□□□□ -0.2
SCFD1-224ENST00000557713 MSANTD1Q6ZTZ1 278 aa13.8□□□□□ -0.2
SCFD1-224ENST00000557713 ZNF786Q8N393 782 aa13.8□□□□□ -0.2
SCFD1-224ENST00000557713 SVOPLQ8N434 492 aa13.8□□□□□ -0.2
SCFD1-224ENST00000557713 TAAR8Q969N4 342 aa13.8□□□□□ -0.2
SCFD1-224ENST00000557713 ITCHQ96J02 903 aa13.8□□□□□ -0.2
SCFD1-224ENST00000557713 ANKRD27Q96NW4 1050 aa13.8□□□□□ -0.2
SCFD1-224ENST00000557713 CENPHQ9H3R5 247 aa13.8□□□□□ -0.2
SCFD1-224ENST00000557713 RMND5AQ9H871 391 aa13.8□□□□□ -0.2
SCFD1-224ENST00000557713 C12orf10Q9HB07 376 aa13.8□□□□□ -0.2
SCFD1-224ENST00000557713 SDR39U1Q9NRG7 319 aaPredicted RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms