RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 TUSC5Q8IXB3 177 aa13.61□□□□□ -0.23
NEDD1-213ENST00000557644 SLC43A2Q8N370 569 aa13.61□□□□□ -0.23
NEDD1-213ENST00000557644 OR10G2Q8NGC3 310 aa13.61□□□□□ -0.23
NEDD1-213ENST00000557644 LIPHQ8WWY8 451 aa13.61□□□□□ -0.23
NEDD1-213ENST00000557644 BDH2Q9BUT1 245 aa13.61□□□□□ -0.23
NEDD1-213ENST00000557644 PHF3Q92576 2039 aaKnown RBP13.61□□□□□ -0.23
NEDD1-213ENST00000557644 ARHGAP21Q5T5U3 1957 aa13.61□□□□□ -0.23
NEDD1-213ENST00000557644 C11orf98E9PRG8 122 aa13.6□□□□□ -0.23
NEDD1-213ENST00000557644 PLGP00747 810 aaPredicted RBP13.6□□□□□ -0.23
NEDD1-213ENST00000557644 HIST1H2ABP04908 130 aa13.6□□□□□ -0.23
NEDD1-213ENST00000557644 ADORA3P0DMS8 318 aa13.6□□□□□ -0.23
NEDD1-213ENST00000557644 AHCYP23526 432 aa13.6□□□□□ -0.23
NEDD1-213ENST00000557644 AQP2P41181 271 aa13.6□□□□□ -0.23
NEDD1-213ENST00000557644 IL1RL1Q01638 556 aa13.6□□□□□ -0.23
NEDD1-213ENST00000557644 C1orf94Q6P1W5 598 aa13.6□□□□□ -0.23
NEDD1-213ENST00000557644 HIST3H2AQ7L7L0 130 aa13.6□□□□□ -0.23
NEDD1-213ENST00000557644 NANOGNBQ7Z5D8 188 aa13.6□□□□□ -0.23
NEDD1-213ENST00000557644 OAFQ86UD1 273 aa13.6□□□□□ -0.23
NEDD1-213ENST00000557644 MCEMP1Q8IX19 187 aa13.6□□□□□ -0.23
NEDD1-213ENST00000557644 SCAIQ8N9R8 606 aa13.6□□□□□ -0.23
NEDD1-213ENST00000557644 MOSPD2Q8NHP6 518 aa13.6□□□□□ -0.23
NEDD1-213ENST00000557644 GIPC3Q8TF64 312 aa13.6□□□□□ -0.23
NEDD1-213ENST00000557644 RND1Q92730 232 aa13.6□□□□□ -0.23
NEDD1-213ENST00000557644 HIST1H2ACQ93077 130 aa13.6□□□□□ -0.23
NEDD1-213ENST00000557644 GTPBP3Q969Y2 492 aaKnown RBP13.6□□□□□ -0.23
NEDD1-213ENST00000557644 CENPNQ96H22 339 aaPredicted RBP13.6□□□□□ -0.23
NEDD1-213ENST00000557644 TNFRSF13CQ96RJ3 184 aa13.6□□□□□ -0.23
NEDD1-213ENST00000557644 FEVQ99581 238 aa13.6□□□□□ -0.23
NEDD1-213ENST00000557644 TMEM5Q9Y2B1 443 aa13.6□□□□□ -0.23
NEDD1-213ENST00000557644 HELZ2Q9BYK8 2649 aaKnown RBP13.6□□□□□ -0.23
NEDD1-213ENST00000557644 USP9XQ93008 2570 aaPredicted RBP13.6□□□□□ -0.23
NEDD1-213ENST00000557644 J3QKU1 62 aa13.6□□□□□ -0.23
NEDD1-213ENST00000557644 SERPINI2O75830 405 aa13.6□□□□□ -0.23
NEDD1-213ENST00000557644 BAG2O95816 211 aa13.6□□□□□ -0.23
NEDD1-213ENST00000557644 TMIGD3P0DMS9 266 aaPredicted RBP13.6□□□□□ -0.23
NEDD1-213ENST00000557644 ZNF26P17031 533 aaPredicted RBP13.6□□□□□ -0.23
NEDD1-213ENST00000557644 NTF4P34130 210 aa13.6□□□□□ -0.23
NEDD1-213ENST00000557644 SIRPAP78324 504 aa13.6□□□□□ -0.23
NEDD1-213ENST00000557644 RPL18Q07020 188 aaKnown RBP13.6□□□□□ -0.23
NEDD1-213ENST00000557644 PUDPQ08623 228 aa13.6□□□□□ -0.23
NEDD1-213ENST00000557644 RNPS1Q15287 305 aaKnown RBP13.6□□□□□ -0.23
NEDD1-213ENST00000557644 TMEM211Q6ICI0 200 aa13.6□□□□□ -0.23
NEDD1-213ENST00000557644 SHQ1Q6PI26 577 aaKnown RBP13.6□□□□□ -0.23
NEDD1-213ENST00000557644 ICA1LQ8NDH6 482 aa13.6□□□□□ -0.23
NEDD1-213ENST00000557644 NIPSNAP1Q9BPW8 284 aa13.6□□□□□ -0.23
NEDD1-213ENST00000557644 KLHL9Q9P2J3 617 aa13.6□□□□□ -0.23
NEDD1-213ENST00000557644 TENM4Q6N022 2769 aa13.59□□□□□ -0.23
NEDD1-213ENST00000557644 ZNF23P17027 643 aa13.59□□□□□ -0.23
NEDD1-213ENST00000557644 KIR2DL2P43627 348 aaPredicted RBP13.59□□□□□ -0.23
NEDD1-213ENST00000557644 RCN1Q15293 331 aa13.59□□□□□ -0.23
NEDD1-213ENST00000557644 GUSBP1Q15486 140 aa13.59□□□□□ -0.23
NEDD1-213ENST00000557644 RIPPLY2Q5TAB7 128 aa13.59□□□□□ -0.23
NEDD1-213ENST00000557644 OR2A2Q6IF42 318 aa13.59□□□□□ -0.23
NEDD1-213ENST00000557644 CNEP1R1Q8N9A8 125 aa13.59□□□□□ -0.23
NEDD1-213ENST00000557644 OR9K2Q8NGE7 335 aa13.59□□□□□ -0.23
NEDD1-213ENST00000557644 GMPPAQ96IJ6 420 aaPredicted RBP13.59□□□□□ -0.23
NEDD1-213ENST00000557644 KRCC1Q9NPI7 259 aaPredicted RBP13.59□□□□□ -0.23
NEDD1-213ENST00000557644 IL20RAQ9UHF4 553 aa13.59□□□□□ -0.23
NEDD1-213ENST00000557644 OAZ3Q9UMX2 235 aa13.59□□□□□ -0.23
NEDD1-213ENST00000557644 RNF6Q9Y252 685 aa13.59□□□□□ -0.23
NEDD1-213ENST00000557644 SLC5A6Q9Y289 635 aa13.59□□□□□ -0.23
NEDD1-213ENST00000557644 ALPK2Q86TB3 2170 aa13.59□□□□□ -0.23
NEDD1-213ENST00000557644 ADGRG4Q8IZF6 3080 aa13.59□□□□□ -0.23
NEDD1-213ENST00000557644 HTR3EA5X5Y0 456 aa13.59□□□□□ -0.23
NEDD1-213ENST00000557644 SAC3D1A6NKF1 404 aa13.59□□□□□ -0.23
NEDD1-213ENST00000557644 TNFSF13O75888 250 aa13.59□□□□□ -0.23
NEDD1-213ENST00000557644 F13BP05160 661 aa13.59□□□□□ -0.23
NEDD1-213ENST00000557644 AGTR1P30556 359 aa13.59□□□□□ -0.23
NEDD1-213ENST00000557644 UQCRC1P31930 480 aa13.59□□□□□ -0.23
NEDD1-213ENST00000557644 IFNGR2P38484 337 aa13.59□□□□□ -0.23
NEDD1-213ENST00000557644 RPS4XP62701 263 aaKnown RBP13.59□□□□□ -0.23
NEDD1-213ENST00000557644 GTF2IRD2BQ6EKJ0 949 aa13.59□□□□□ -0.23
NEDD1-213ENST00000557644 VWA1Q6PCB0 445 aa13.59□□□□□ -0.23
NEDD1-213ENST00000557644 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.59□□□□□ -0.23
NEDD1-213ENST00000557644 GTF2IRD2Q86UP8 949 aa13.59□□□□□ -0.23
NEDD1-213ENST00000557644 LIX1LQ8IVB5 337 aa13.59□□□□□ -0.23
NEDD1-213ENST00000557644 PQLC1Q8N2U9 271 aa13.59□□□□□ -0.23
NEDD1-213ENST00000557644 ADPRHL1Q8NDY3 354 aa13.59□□□□□ -0.23
NEDD1-213ENST00000557644 OR5K1Q8NHB7 308 aa13.59□□□□□ -0.23
NEDD1-213ENST00000557644 ZNF385AQ96PM9 386 aaKnown RBP13.59□□□□□ -0.23
NEDD1-213ENST00000557644 ENKD1Q9H0I2 346 aa13.59□□□□□ -0.23
NEDD1-213ENST00000557644 BCO1Q9HAY6 547 aa13.59□□□□□ -0.23
NEDD1-213ENST00000557644 MCCC2Q9HCC0 563 aa13.59□□□□□ -0.23
NEDD1-213ENST00000557644 RASD1Q9Y272 281 aa13.59□□□□□ -0.23
NEDD1-213ENST00000557644 HIF3AQ9Y2N7 669 aa13.59□□□□□ -0.23
NEDD1-213ENST00000557644 FLVCR1Q9Y5Y0 555 aa13.59□□□□□ -0.23
NEDD1-213ENST00000557644 INTS1Q8N201 2190 aaKnown RBP13.58□□□□□ -0.24
NEDD1-213ENST00000557644 A0A1W2PNV4 684 aa13.58□□□□□ -0.24
NEDD1-213ENST00000557644 G3V2T6 193 aa13.58□□□□□ -0.24
NEDD1-213ENST00000557644 PDLIM1O00151 329 aa13.58□□□□□ -0.24
NEDD1-213ENST00000557644 RNF13O43567 381 aa13.58□□□□□ -0.24
NEDD1-213ENST00000557644 ZG16O60844 167 aa13.58□□□□□ -0.24
NEDD1-213ENST00000557644 SS18L1O75177 396 aaPredicted RBP13.58□□□□□ -0.24
NEDD1-213ENST00000557644 OR6A2O95222 327 aa13.58□□□□□ -0.24
NEDD1-213ENST00000557644 TSPAN19P0C672 248 aa13.58□□□□□ -0.24
NEDD1-213ENST00000557644 FPR3P25089 353 aa13.58□□□□□ -0.24
NEDD1-213ENST00000557644 EDNRAP25101 427 aa13.58□□□□□ -0.24
NEDD1-213ENST00000557644 GSSP48637 474 aa13.58□□□□□ -0.24
NEDD1-213ENST00000557644 SLC16A1P53985 500 aa13.58□□□□□ -0.24
NEDD1-213ENST00000557644 FXYD6P3P58550 94 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms