RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 RGS6P49758 472 aa11.27□□□□□ -0.61
SHMT2-233ENST00000557529 SLC25A1P53007 311 aa11.27□□□□□ -0.61
SHMT2-233ENST00000557529 SLC16A1P53985 500 aa11.27□□□□□ -0.61
SHMT2-233ENST00000557529 WNT4P56705 351 aa11.27□□□□□ -0.61
SHMT2-233ENST00000557529 MLLT11Q13015 90 aaPredicted RBP11.27□□□□□ -0.61
SHMT2-233ENST00000557529 SELENBP1Q13228 472 aa11.27□□□□□ -0.61
SHMT2-233ENST00000557529 PON3Q15166 354 aa11.27□□□□□ -0.61
SHMT2-233ENST00000557529 INPP5JQ15735 1006 aaPredicted RBP11.27□□□□□ -0.61
SHMT2-233ENST00000557529 CTF1Q16619 201 aa11.27□□□□□ -0.61
SHMT2-233ENST00000557529 TIMM50Q3ZCQ8 353 aa11.27□□□□□ -0.61
SHMT2-233ENST00000557529 ZNF468Q5VIY5 522 aaPredicted RBP11.27□□□□□ -0.61
SHMT2-233ENST00000557529 ABHD17BQ5VST6 288 aa11.27□□□□□ -0.61
SHMT2-233ENST00000557529 SLC6A19Q695T7 634 aa11.27□□□□□ -0.61
SHMT2-233ENST00000557529 TIGD3Q6B0B8 471 aa11.27□□□□□ -0.61
SHMT2-233ENST00000557529 BEST3Q8N1M1 668 aa11.27□□□□□ -0.61
SHMT2-233ENST00000557529 GTPBP8Q8N3Z3 284 aaPredicted RBP11.27□□□□□ -0.61
SHMT2-233ENST00000557529 KLHL36Q8N4N3 616 aa11.27□□□□□ -0.61
SHMT2-233ENST00000557529 ACBD7Q8N6N7 88 aa11.27□□□□□ -0.61
SHMT2-233ENST00000557529 NPEPL1Q8NDH3 523 aa11.27□□□□□ -0.61
SHMT2-233ENST00000557529 OR4F15Q8NGB8 312 aa11.27□□□□□ -0.61
SHMT2-233ENST00000557529 OR51G2Q8NGK0 314 aa11.27□□□□□ -0.61
SHMT2-233ENST00000557529 OR9Q1Q8NGQ5 310 aa11.27□□□□□ -0.61
SHMT2-233ENST00000557529 RASD2Q96D21 266 aa11.27□□□□□ -0.61
SHMT2-233ENST00000557529 Q96M85 177 aa11.27□□□□□ -0.61
SHMT2-233ENST00000557529 NMNAT3Q96T66 252 aa11.27□□□□□ -0.61
SHMT2-233ENST00000557529 DDOQ99489 341 aa11.27□□□□□ -0.61
SHMT2-233ENST00000557529 NPAS1Q99742 590 aa11.27□□□□□ -0.61
SHMT2-233ENST00000557529 NMNAT2Q9BZQ4 307 aa11.27□□□□□ -0.61
SHMT2-233ENST00000557529 PROK2Q9HC23 129 aa11.27□□□□□ -0.61
SHMT2-233ENST00000557529 ALKBH4Q9NXW9 302 aa11.27□□□□□ -0.61
SHMT2-233ENST00000557529 DKKL1Q9UK85 242 aa11.27□□□□□ -0.61
SHMT2-233ENST00000557529 MUC6Q6W4X9 2439 aa11.26□□□□□ -0.61
SHMT2-233ENST00000557529 LIPT2A6NK58 231 aa11.26□□□□□ -0.61
SHMT2-233ENST00000557529 J3QRE1 110 aa11.26□□□□□ -0.61
SHMT2-233ENST00000557529 RNF13O43567 381 aa11.26□□□□□ -0.61
SHMT2-233ENST00000557529 FZD7O75084 574 aa11.26□□□□□ -0.61
SHMT2-233ENST00000557529 TRIM3O75382 744 aaPredicted RBP11.26□□□□□ -0.61
SHMT2-233ENST00000557529 RENP00797 406 aa11.26□□□□□ -0.61
SHMT2-233ENST00000557529 IGHMP01871 453 aa11.26□□□□□ -0.61
SHMT2-233ENST00000557529 SBK2P0C263 348 aa11.26□□□□□ -0.61
SHMT2-233ENST00000557529 LIMS3P0CW19 117 aa11.26□□□□□ -0.61
SHMT2-233ENST00000557529 LIMS4P0CW20 117 aa11.26□□□□□ -0.61
SHMT2-233ENST00000557529 ZNF17P17021 662 aa11.26□□□□□ -0.61
SHMT2-233ENST00000557529 ITGA3P26006 1051 aa11.26□□□□□ -0.61
SHMT2-233ENST00000557529 DPP4P27487 766 aa11.26□□□□□ -0.61
SHMT2-233ENST00000557529 ACTC1P68032 377 aa11.26□□□□□ -0.61
SHMT2-233ENST00000557529 ACTA1P68133 377 aa11.26□□□□□ -0.61
SHMT2-233ENST00000557529 ZP4Q12836 540 aa11.26□□□□□ -0.61
SHMT2-233ENST00000557529 LSAMPQ13449 338 aa11.26□□□□□ -0.61
SHMT2-233ENST00000557529 KRR1Q13601 381 aaKnown RBP11.26□□□□□ -0.61
SHMT2-233ENST00000557529 GLYR1Q49A26 553 aaPredicted RBP11.26□□□□□ -0.61
SHMT2-233ENST00000557529 LEG1Q6P5S2 330 aa11.26□□□□□ -0.61
SHMT2-233ENST00000557529 TMPRSS11AQ6ZMR5 421 aa11.26□□□□□ -0.61
SHMT2-233ENST00000557529 H1FNTQ75WM6 255 aaPredicted RBP11.26□□□□□ -0.61
SHMT2-233ENST00000557529 SHFQ7M4L6 423 aa11.26□□□□□ -0.61
SHMT2-233ENST00000557529 ADCK1Q86TW2 530 aa11.26□□□□□ -0.61
SHMT2-233ENST00000557529 MARCH9Q86YJ5 346 aa11.26□□□□□ -0.61
SHMT2-233ENST00000557529 POMGNT2Q8NAT1 580 aa11.26□□□□□ -0.61
SHMT2-233ENST00000557529 CLEC1AQ8NC01 280 aa11.26□□□□□ -0.61
SHMT2-233ENST00000557529 ZNF248Q8NDW4 579 aa11.26□□□□□ -0.61
SHMT2-233ENST00000557529 ATP6V1C2Q8NEY4 427 aa11.26□□□□□ -0.61
SHMT2-233ENST00000557529 OR52N1Q8NH53 320 aa11.26□□□□□ -0.61
SHMT2-233ENST00000557529 ZNF417Q8TAU3 575 aa11.26□□□□□ -0.61
SHMT2-233ENST00000557529 OPALINQ96PE5 141 aa11.26□□□□□ -0.61
SHMT2-233ENST00000557529 TSPAN32Q96QS1 320 aa11.26□□□□□ -0.61
SHMT2-233ENST00000557529 SNX18Q96RF0 628 aa11.26□□□□□ -0.61
SHMT2-233ENST00000557529 ZNF587Q96SQ5 575 aaPredicted RBP11.26□□□□□ -0.61
SHMT2-233ENST00000557529 TXNIPQ9H3M7 391 aa11.26□□□□□ -0.61
SHMT2-233ENST00000557529 TIMMDC1Q9NPL8 285 aa11.26□□□□□ -0.61
SHMT2-233ENST00000557529 ERVK13-1Q9NX77 482 aa11.26□□□□□ -0.61
SHMT2-233ENST00000557529 MOKQ9UQ07 419 aa11.26□□□□□ -0.61
SHMT2-233ENST00000557529 HDGFL3Q9Y3E1 203 aa11.26□□□□□ -0.61
SHMT2-233ENST00000557529 PCDHGB7Q9Y5F8 929 aa11.26□□□□□ -0.61
SHMT2-233ENST00000557529 A0A1W2PPW3 197 aa11.25□□□□□ -0.61
SHMT2-233ENST00000557529 A0A1W2PRG6 482 aa11.25□□□□□ -0.61
SHMT2-233ENST00000557529 OR6C68A6NDL8 312 aa11.25□□□□□ -0.61
SHMT2-233ENST00000557529 SHISA8B8ZZ34 492 aa11.25□□□□□ -0.61
SHMT2-233ENST00000557529 C11orf98E9PRG8 122 aa11.25□□□□□ -0.61
SHMT2-233ENST00000557529 H3BML4 177 aa11.25□□□□□ -0.61
SHMT2-233ENST00000557529 XKRYO14609 159 aa11.25□□□□□ -0.61
SHMT2-233ENST00000557529 SLC30A4O14863 429 aa11.25□□□□□ -0.61
SHMT2-233ENST00000557529 AIREO43918 545 aa11.25□□□□□ -0.61
SHMT2-233ENST00000557529 EFNA2O43921 213 aa11.25□□□□□ -0.61
SHMT2-233ENST00000557529 CLUP10909 449 aa11.25□□□□□ -0.61
SHMT2-233ENST00000557529 SPI1P17947 270 aa11.25□□□□□ -0.61
SHMT2-233ENST00000557529 AHCYP23526 432 aa11.25□□□□□ -0.61
SHMT2-233ENST00000557529 PCSK6P29122 969 aa11.25□□□□□ -0.61
SHMT2-233ENST00000557529 CDKN2AP42771 156 aaKnown RBP11.25□□□□□ -0.61
SHMT2-233ENST00000557529 CAPZA2P47755 286 aa11.25□□□□□ -0.61
SHMT2-233ENST00000557529 DIO1P49895 249 aa11.25□□□□□ -0.61
SHMT2-233ENST00000557529 RRADP55042 308 aa11.25□□□□□ -0.61
SHMT2-233ENST00000557529 RPL27P61353 136 aaKnown RBP11.25□□□□□ -0.61
SHMT2-233ENST00000557529 OC90Q02509 493 aaPredicted RBP11.25□□□□□ -0.61
SHMT2-233ENST00000557529 NFATC3Q12968 1075 aa11.25□□□□□ -0.61
SHMT2-233ENST00000557529 GGTLC2Q14390 218 aa11.25□□□□□ -0.61
SHMT2-233ENST00000557529 OR7A5Q15622 319 aa11.25□□□□□ -0.61
SHMT2-233ENST00000557529 TSTQ16762 297 aaKnown RBP11.25□□□□□ -0.61
SHMT2-233ENST00000557529 C19orf48Q6RUI8 117 aa11.25□□□□□ -0.61
SHMT2-233ENST00000557529 PAQR6Q6TCH4 344 aa11.25□□□□□ -0.61
SHMT2-233ENST00000557529 ASCL5Q7RTU5 278 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms