RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 SLC38A4Q969I6 547 aa12.37□□□□□ -0.43
SNX6-210ENST00000557341 KTI12Q96EK9 354 aaPredicted RBP12.37□□□□□ -0.43
SNX6-210ENST00000557341 SLC38A2Q96QD8 506 aa12.37□□□□□ -0.43
SNX6-210ENST00000557341 EBF4Q9BQW3 602 aa12.37□□□□□ -0.43
SNX6-210ENST00000557341 CCDC28BQ9BUN5 200 aa12.37□□□□□ -0.43
SNX6-210ENST00000557341 KATNB1Q9BVA0 655 aa12.37□□□□□ -0.43
SNX6-210ENST00000557341 MOV10Q9HCE1 1003 aaKnown RBP12.37□□□□□ -0.43
SNX6-210ENST00000557341 VAPAQ9P0L0 249 aa12.37□□□□□ -0.43
SNX6-210ENST00000557341 TESQ9UGI8 421 aaKnown RBP12.37□□□□□ -0.43
SNX6-210ENST00000557341 CORO2BQ9UQ03 480 aa12.37□□□□□ -0.43
SNX6-210ENST00000557341 PMF1-BGLAPU3KQ54 211 aa12.37□□□□□ -0.43
SNX6-210ENST00000557341 A0A096LNT2 108 aa12.36□□□□□ -0.43
SNX6-210ENST00000557341 ARPC4-TTLL3A0A0A6YYG9 625 aa12.36□□□□□ -0.43
SNX6-210ENST00000557341 IGHV1-18A0A0C4DH31 117 aa12.36□□□□□ -0.43
SNX6-210ENST00000557341 AIM2O14862 343 aa12.36□□□□□ -0.43
SNX6-210ENST00000557341 AKAP8O43823 692 aaKnown RBP12.36□□□□□ -0.43
SNX6-210ENST00000557341 FZD7O75084 574 aa12.36□□□□□ -0.43
SNX6-210ENST00000557341 UPK3AO75631 287 aa12.36□□□□□ -0.43
SNX6-210ENST00000557341 CRYAAP02489 173 aa12.36□□□□□ -0.43
SNX6-210ENST00000557341 SLC25A16P16260 332 aa12.36□□□□□ -0.43
SNX6-210ENST00000557341 HTR2AP28223 471 aa12.36□□□□□ -0.43
SNX6-210ENST00000557341 EFNA4P52798 201 aa12.36□□□□□ -0.43
SNX6-210ENST00000557341 CLDN17P56750 224 aa12.36□□□□□ -0.43
SNX6-210ENST00000557341 CDK6Q00534 326 aa12.36□□□□□ -0.43
SNX6-210ENST00000557341 ROR2Q01974 943 aaKnown RBP12.36□□□□□ -0.43
SNX6-210ENST00000557341 ALG10BQ5I7T1 473 aa12.36□□□□□ -0.43
SNX6-210ENST00000557341 ANKRD16Q6P6B7 361 aa12.36□□□□□ -0.43
SNX6-210ENST00000557341 DHRS4L2Q6PKH6 230 aa12.36□□□□□ -0.43
SNX6-210ENST00000557341 LINGO2Q7L985 606 aa12.36□□□□□ -0.43
SNX6-210ENST00000557341 KDM8Q8N371 416 aa12.36□□□□□ -0.43
SNX6-210ENST00000557341 MAGEE2Q8TD90 523 aaPredicted RBP12.36□□□□□ -0.43
SNX6-210ENST00000557341 DNAJA4Q8WW22 397 aaPredicted RBP12.36□□□□□ -0.43
SNX6-210ENST00000557341 DYDC1Q8WWB3 177 aa12.36□□□□□ -0.43
SNX6-210ENST00000557341 FAM168AQ92567 244 aa12.36□□□□□ -0.43
SNX6-210ENST00000557341 YAE1D1Q9NRH1 226 aa12.36□□□□□ -0.43
SNX6-210ENST00000557341 SLAMF8Q9P0V8 285 aa12.36□□□□□ -0.43
SNX6-210ENST00000557341 SEC14L4Q9UDX3 406 aa12.36□□□□□ -0.43
SNX6-210ENST00000557341 FKBP7Q9Y680 259 aa12.36□□□□□ -0.43
SNX6-210ENST00000557341 GMEB1Q9Y692 573 aa12.36□□□□□ -0.43
SNX6-210ENST00000557341 MALRD1Q5VYJ5 2156 aa12.36□□□□□ -0.43
SNX6-210ENST00000557341 TRBV5-3A0A0A0MS03 114 aa12.35□□□□□ -0.43
SNX6-210ENST00000557341 A0A1B0GWA3 101 aa12.35□□□□□ -0.43
SNX6-210ENST00000557341 PRORSD1PA6NEY8 169 aa12.35□□□□□ -0.43
SNX6-210ENST00000557341 A8MV72 311 aaPredicted RBP12.35□□□□□ -0.43
SNX6-210ENST00000557341 M0R082 166 aa12.35□□□□□ -0.43
SNX6-210ENST00000557341 SLC43A1O75387 559 aa12.35□□□□□ -0.43
SNX6-210ENST00000557341 ATP4BP51164 291 aa12.35□□□□□ -0.43
SNX6-210ENST00000557341 AQP5P55064 265 aa12.35□□□□□ -0.43
SNX6-210ENST00000557341 RGS8P57771 180 aaPredicted RBP12.35□□□□□ -0.43
SNX6-210ENST00000557341 SNRPD2P62316 118 aaKnown RBP12.35□□□□□ -0.43
SNX6-210ENST00000557341 SCARB2Q14108 478 aa12.35□□□□□ -0.43
SNX6-210ENST00000557341 SQLEQ14534 574 aa12.35□□□□□ -0.43
SNX6-210ENST00000557341 TMEM249Q2WGJ8 235 aa12.35□□□□□ -0.43
SNX6-210ENST00000557341 C3orf36Q3SXR2 165 aa12.35□□□□□ -0.43
SNX6-210ENST00000557341 PAGE3Q5JUK9 113 aa12.35□□□□□ -0.43
SNX6-210ENST00000557341 FAM91A1Q658Y4 838 aa12.35□□□□□ -0.43
SNX6-210ENST00000557341 ULK3Q6PHR2 472 aa12.35□□□□□ -0.43
SNX6-210ENST00000557341 COMTD1Q86VU5 262 aa12.35□□□□□ -0.43
SNX6-210ENST00000557341 C10orf111Q8N326 155 aa12.35□□□□□ -0.43
SNX6-210ENST00000557341 ANKK1Q8NFD2 765 aa12.35□□□□□ -0.43
SNX6-210ENST00000557341 BHLHE22Q8NFJ8 381 aaPredicted RBP12.35□□□□□ -0.43
SNX6-210ENST00000557341 ZNF417Q8TAU3 575 aa12.35□□□□□ -0.43
SNX6-210ENST00000557341 BCL2L2Q92843 193 aaPredicted RBP12.35□□□□□ -0.43
SNX6-210ENST00000557341 FBXO17Q96EF6 278 aa12.35□□□□□ -0.43
SNX6-210ENST00000557341 ATP6V1G3Q96LB4 118 aa12.35□□□□□ -0.43
SNX6-210ENST00000557341 OXGR1Q96P68 337 aa12.35□□□□□ -0.43
SNX6-210ENST00000557341 TNFRSF13CQ96RJ3 184 aa12.35□□□□□ -0.43
SNX6-210ENST00000557341 ZNF607Q96SK3 696 aa12.35□□□□□ -0.43
SNX6-210ENST00000557341 ZNF587Q96SQ5 575 aaPredicted RBP12.35□□□□□ -0.43
SNX6-210ENST00000557341 MDFIQ99750 246 aa12.35□□□□□ -0.43
SNX6-210ENST00000557341 NELFAQ9H3P2 528 aa12.35□□□□□ -0.43
SNX6-210ENST00000557341 TMEM38AQ9H6F2 299 aa12.35□□□□□ -0.43
SNX6-210ENST00000557341 CA10Q9NS85 328 aa12.35□□□□□ -0.43
SNX6-210ENST00000557341 SELENONQ9NZV5 590 aa12.35□□□□□ -0.43
SNX6-210ENST00000557341 B3GAT1Q9P2W7 334 aa12.35□□□□□ -0.43
SNX6-210ENST00000557341 CRNNQ9UBG3 495 aaPredicted RBP12.35□□□□□ -0.43
SNX6-210ENST00000557341 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.35□□□□□ -0.43
SNX6-210ENST00000557341 SLC13A4Q9UKG4 626 aa12.35□□□□□ -0.43
SNX6-210ENST00000557341 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.35□□□□□ -0.436e-10■■■□□ 15.5
SNX6-210ENST00000557341 TRAV36DV7A0A075B6V5 113 aa12.34□□□□□ -0.43
SNX6-210ENST00000557341 A0A096LPE4 126 aa12.34□□□□□ -0.43
SNX6-210ENST00000557341 A0A1W2PPZ6 126 aa12.34□□□□□ -0.43
SNX6-210ENST00000557341 EVPLLA8MZ36 301 aa12.34□□□□□ -0.43
SNX6-210ENST00000557341 RPL36A-HNRNPH2H7BZ11 118 aa12.34□□□□□ -0.43
SNX6-210ENST00000557341 GPRIN2O60269 458 aa12.34□□□□□ -0.43
SNX6-210ENST00000557341 PDE5AO76074 875 aa12.34□□□□□ -0.43
SNX6-210ENST00000557341 ZNF432O94892 652 aa12.34□□□□□ -0.43
SNX6-210ENST00000557341 CECR9P0C854 216 aa12.34□□□□□ -0.43
SNX6-210ENST00000557341 HOXB1P14653 301 aaPredicted RBP12.34□□□□□ -0.43
SNX6-210ENST00000557341 SLC6A2P23975 617 aa12.34□□□□□ -0.43
SNX6-210ENST00000557341 GRPRP30550 384 aa12.34□□□□□ -0.43
SNX6-210ENST00000557341 TUBA1BP68363 451 aa12.34□□□□□ -0.43
SNX6-210ENST00000557341 TUBA4AP68366 448 aa12.34□□□□□ -0.43
SNX6-210ENST00000557341 IL1RL1Q01638 556 aa12.34□□□□□ -0.43
SNX6-210ENST00000557341 NAAAQ02083 359 aa12.34□□□□□ -0.43
SNX6-210ENST00000557341 LOXL1Q08397 574 aaPredicted RBP12.34□□□□□ -0.43
SNX6-210ENST00000557341 C1DQ13901 141 aaKnown RBP12.34□□□□□ -0.43
SNX6-210ENST00000557341 MFSD13AQ14CX5 517 aa12.34□□□□□ -0.43
SNX6-210ENST00000557341 AGKQ53H12 422 aa12.34□□□□□ -0.43
SNX6-210ENST00000557341 C6orf52Q5T4I8 152 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms