RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 BRIX1Q8TDN6 353 aaKnown RBP4.06□□□□□ -1.76
SRP54-212ENST00000556992 TMEM255BQ8WV15 326 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 METTL21AQ8WXB1 218 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 CNOT9Q92600 299 aaKnown RBP4.06□□□□□ -1.76
SRP54-212ENST00000556992 SGCDQ92629 289 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 RAB24Q969Q5 203 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 BPIFA2Q96DR5 249 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 YIPF6Q96EC8 236 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 HSPBAP1Q96EW2 488 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 LRR1Q96L50 414 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 OR6C1Q96RD1 312 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 SIGLEC11Q96RL6 698 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 GFM1Q96RP9 751 aaKnown RBP4.06□□□□□ -1.76
SRP54-212ENST00000556992 GPA33Q99795 319 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 NUDT22Q9BRQ3 303 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 FUNDC2Q9BWH2 189 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 TSSK6Q9BXA6 273 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 ITPAQ9BY32 194 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 SLC19A3Q9BZV2 496 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 OR8D2Q9GZM6 311 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 HHATLQ9HCP6 504 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 AMBNQ9NP70 447 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 EXOSC3Q9NQT5 275 aaKnown RBP4.06□□□□□ -1.76
SRP54-212ENST00000556992 CTPS2Q9NRF8 586 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 MRPS18AQ9NVS2 196 aaKnown RBP4.06□□□□□ -1.76
SRP54-212ENST00000556992 SIDT1Q9NXL6 827 aaKnown RBP4.06□□□□□ -1.76
SRP54-212ENST00000556992 GPR83Q9NYM4 423 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 DHCR7Q9UBM7 475 aaKnown RBP4.06□□□□□ -1.76
SRP54-212ENST00000556992 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.06□□□□□ -1.76
SRP54-212ENST00000556992 BAIAP2Q9UQB8 552 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 TMEM184BQ9Y519 407 aaPredicted RBP4.06□□□□□ -1.76
SRP54-212ENST00000556992 PCDHGB2Q9Y5G2 931 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 CDH10Q9Y6N8 788 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 GBF1Q92538 1859 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 KIF26AQ9ULI4 1882 aaPredicted RBP4.06□□□□□ -1.76
SRP54-212ENST00000556992 LAMA5O15230 3695 aa4.06□□□□□ -1.76
SRP54-212ENST00000556992 PLXNB3Q9ULL4 1909 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 GPR179Q6PRD1 2367 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 KIAA1549LQ6ZVL6 1849 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 FRYQ5TBA9 3013 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 IGLV3-12A0A075B6K2 115 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 A0A0B4J2E0 115 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 LY6G6EA0A0G2JKS1 128 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 A0A1B0GWA3 101 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 A0A1B0GX12 115 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 A0A1W2PQM1 296 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 A8MUA0 341 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 VWC2LB2RUY7 222 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 TMX2-CTNND1H3BSU7 103 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 CHP2O43745 196 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 IDH3BO43837 385 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 PRKYO43930 277 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 EIF4E2O60573 245 aaKnown RBP4.05□□□□□ -1.76
SRP54-212ENST00000556992 REM1O75628 298 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 SCRG1O75711 98 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 LYPD3O95274 346 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 UTS2O95399 124 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 SOX14O95416 240 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 LDOC1O95751 146 aaPredicted RBP4.05□□□□□ -1.76
SRP54-212ENST00000556992 IGF2P01344 180 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 CLPSP04118 112 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 THY1P04216 161 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 AMY1AP04745 511 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 KLK3P07288 261 aaPredicted RBP4.05□□□□□ -1.76
SRP54-212ENST00000556992 GP1BAP07359 652 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 IGFBP1P08833 259 aaPredicted RBP4.05□□□□□ -1.76
SRP54-212ENST00000556992 CD63P08962 238 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 ZNF883P0CG24 379 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 UBL4AP11441 157 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 FGF5P12034 268 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 PEPDP12955 493 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 IFI30P13284 250 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 CD36P16671 472 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 NAGAP17050 411 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 MYL12AP19105 171 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 WT1P19544 449 aaPredicted RBP4.05□□□□□ -1.76
SRP54-212ENST00000556992 HTR2AP28223 471 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 PCSK6P29122 969 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 C21orf33P30042 268 aaPredicted RBP4.05□□□□□ -1.76
SRP54-212ENST00000556992 GRK5P34947 590 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 ATP6V1E1P36543 226 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 PEX19P40855 299 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 GRK6P43250 576 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 SLC6A8P48029 635 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 SERPINB10P48595 397 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 RGS6P49758 472 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 PNLIPRP2P54317 469 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 EMP2P54851 167 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 KRTAP10-6P60371 365 aaPredicted RBP4.05□□□□□ -1.76
SRP54-212ENST00000556992 C1DQ13901 141 aaKnown RBP4.05□□□□□ -1.76
SRP54-212ENST00000556992 EFR3AQ14156 821 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 TBCEQ15813 527 aaPredicted RBP4.05□□□□□ -1.76
SRP54-212ENST00000556992 CTF1Q16619 201 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 MOGQ16653 247 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 DGUOKQ16854 277 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 TIGD6Q17RP2 521 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 TIMM50Q3ZCQ8 353 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 ANKDD1AQ495B1 522 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 SYT14P1Q58G82 188 aa4.05□□□□□ -1.76
SRP54-212ENST00000556992 VWA2Q5GFL6 755 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms