RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 NOP53Q9NZM5 478 aaKnown RBP7.78□□□□□ -1.16
HNRNPC-227ENST00000556897 REV1Q9UBZ9 1251 aa7.78□□□□□ -1.16
HNRNPC-227ENST00000556897 MARCOQ9UEW3 520 aaPredicted RBP7.78□□□□□ -1.16
HNRNPC-227ENST00000556897 ZDHHC2Q9UIJ5 367 aa7.78□□□□□ -1.16
HNRNPC-227ENST00000556897 USP22Q9UPT9 525 aa7.78□□□□□ -1.16
HNRNPC-227ENST00000556897 LOC105371242A0A075B767 164 aa7.77□□□□□ -1.17
HNRNPC-227ENST00000556897 PRSS51A0A1B0GVH4 220 aa7.77□□□□□ -1.17
HNRNPC-227ENST00000556897 TMEM229AB2RXF0 380 aa7.77□□□□□ -1.17
HNRNPC-227ENST00000556897 M0R233 179 aa7.77□□□□□ -1.17
HNRNPC-227ENST00000556897 FRS3O43559 492 aa7.77□□□□□ -1.17
HNRNPC-227ENST00000556897 VAMP5O95183 116 aa7.77□□□□□ -1.17
HNRNPC-227ENST00000556897 AVPP01185 164 aa7.77□□□□□ -1.17
HNRNPC-227ENST00000556897 HPXP02790 462 aa7.77□□□□□ -1.17
HNRNPC-227ENST00000556897 CHRM4P08173 479 aa7.77□□□□□ -1.17
HNRNPC-227ENST00000556897 GKN3PP0CG01 181 aa7.77□□□□□ -1.17
HNRNPC-227ENST00000556897 GAAP10253 952 aa7.77□□□□□ -1.17
HNRNPC-227ENST00000556897 IL7RP16871 459 aa7.77□□□□□ -1.17
HNRNPC-227ENST00000556897 NR4A1P22736 598 aa7.77□□□□□ -1.17
HNRNPC-227ENST00000556897 COL8A2P25067 703 aa7.77□□□□□ -1.17
HNRNPC-227ENST00000556897 CHI3L1P36222 383 aaPredicted RBP7.77□□□□□ -1.17
HNRNPC-227ENST00000556897 CAPZA2P47755 286 aa7.77□□□□□ -1.17
HNRNPC-227ENST00000556897 ARFIP2P53365 341 aa7.77□□□□□ -1.17
HNRNPC-227ENST00000556897 POU3F1Q03052 451 aaPredicted RBP7.77□□□□□ -1.17
HNRNPC-227ENST00000556897 EMX2Q04743 252 aa7.77□□□□□ -1.17
HNRNPC-227ENST00000556897 SYPL1Q16563 259 aa7.77□□□□□ -1.17
HNRNPC-227ENST00000556897 GSTA3Q16772 222 aa7.77□□□□□ -1.17
HNRNPC-227ENST00000556897 PRR31Q5SQ13 230 aa7.77□□□□□ -1.17
HNRNPC-227ENST00000556897 C1orf229Q6ZS94 237 aaPredicted RBP7.77□□□□□ -1.17
HNRNPC-227ENST00000556897 USP43Q70EL4 1123 aa7.77□□□□□ -1.17
HNRNPC-227ENST00000556897 MDP1Q86V88 176 aa7.77□□□□□ -1.17
HNRNPC-227ENST00000556897 RNF130Q86XS8 419 aa7.77□□□□□ -1.17
HNRNPC-227ENST00000556897 GSPT2Q8IYD1 628 aaKnown RBP7.77□□□□□ -1.17
HNRNPC-227ENST00000556897 KDM8Q8N371 416 aa7.77□□□□□ -1.17
HNRNPC-227ENST00000556897 CADM2Q8N3J6 435 aa7.77□□□□□ -1.17
HNRNPC-227ENST00000556897 OR8J2Q8NGG1 315 aa7.77□□□□□ -1.17
HNRNPC-227ENST00000556897 OR51F2Q8NH61 342 aa7.77□□□□□ -1.17
HNRNPC-227ENST00000556897 MRPL24Q96A35 216 aaKnown RBP7.77□□□□□ -1.17
HNRNPC-227ENST00000556897 ZNF837Q96EG3 531 aaPredicted RBP7.77□□□□□ -1.17
HNRNPC-227ENST00000556897 NEURL3Q96EH8 262 aa7.77□□□□□ -1.17
HNRNPC-227ENST00000556897 PPP1R36Q96LQ0 422 aa7.77□□□□□ -1.17
HNRNPC-227ENST00000556897 TRNT1Q96Q11 434 aaKnown RBP7.77□□□□□ -1.17
HNRNPC-227ENST00000556897 OCSTAMPQ9BR26 566 aa7.77□□□□□ -1.17
HNRNPC-227ENST00000556897 SLC35A5Q9BS91 424 aa7.77□□□□□ -1.17
HNRNPC-227ENST00000556897 MRPL37Q9BZE1 423 aaKnown RBP7.77□□□□□ -1.17
HNRNPC-227ENST00000556897 LINC00470Q9BZP3 86 aa7.77□□□□□ -1.17
HNRNPC-227ENST00000556897 SLC38A1Q9H2H9 487 aa7.77□□□□□ -1.17
HNRNPC-227ENST00000556897 CMAHPQ9Y471 501 aa7.77□□□□□ -1.17
HNRNPC-227ENST00000556897 A8MVM7 634 aa7.76□□□□□ -1.17
HNRNPC-227ENST00000556897 DYNC1I1O14576 645 aa7.76□□□□□ -1.17
HNRNPC-227ENST00000556897 TMPRSS2O15393 492 aa7.76□□□□□ -1.17
HNRNPC-227ENST00000556897 SYNGR3O43761 229 aa7.76□□□□□ -1.17
HNRNPC-227ENST00000556897 SEC14L2O76054 403 aa7.76□□□□□ -1.17
HNRNPC-227ENST00000556897 ZNF432O94892 652 aa7.76□□□□□ -1.17
HNRNPC-227ENST00000556897 PNPP00491 289 aa7.76□□□□□ -1.17
HNRNPC-227ENST00000556897 TFP02787 698 aa7.76□□□□□ -1.17
HNRNPC-227ENST00000556897 RPS4Y1P22090 263 aaKnown RBP7.76□□□□□ -1.17
HNRNPC-227ENST00000556897 ACHEP22303 614 aa7.76□□□□□ -1.17
HNRNPC-227ENST00000556897 ALDH3B1P43353 468 aa7.76□□□□□ -1.17
HNRNPC-227ENST00000556897 LIMS1P48059 325 aa7.76□□□□□ -1.17
HNRNPC-227ENST00000556897 SEC24CP53992 1094 aa7.76□□□□□ -1.17
HNRNPC-227ENST00000556897 CLDN17P56750 224 aa7.76□□□□□ -1.17
HNRNPC-227ENST00000556897 MAD2L1Q13257 205 aaPredicted RBP7.76□□□□□ -1.17
HNRNPC-227ENST00000556897 GNA13Q14344 377 aa7.76□□□□□ -1.17
HNRNPC-227ENST00000556897 CEACAM16Q2WEN9 425 aa7.76□□□□□ -1.17
HNRNPC-227ENST00000556897 SLC9B1Q4ZJI4 515 aa7.76□□□□□ -1.17
HNRNPC-227ENST00000556897 ANXA8L1Q5VT79 327 aa7.76□□□□□ -1.17
HNRNPC-227ENST00000556897 C1orf140Q5VVS0 124 aa7.76□□□□□ -1.17
HNRNPC-227ENST00000556897 VPS37AQ8NEZ2 397 aa7.76□□□□□ -1.17
HNRNPC-227ENST00000556897 IL17RDQ8NFM7 739 aa7.76□□□□□ -1.17
HNRNPC-227ENST00000556897 RDH5Q92781 318 aa7.76□□□□□ -1.17
HNRNPC-227ENST00000556897 YIPF5Q969M3 257 aa7.76□□□□□ -1.17
HNRNPC-227ENST00000556897 TRIM44Q96DX7 344 aaPredicted RBP7.76□□□□□ -1.17
HNRNPC-227ENST00000556897 APOPT1Q96IL0 206 aa7.76□□□□□ -1.17
HNRNPC-227ENST00000556897 JMJD8Q96S16 334 aa7.76□□□□□ -1.17
HNRNPC-227ENST00000556897 SYT3Q9BQG1 590 aa7.76□□□□□ -1.17
HNRNPC-227ENST00000556897 DPY30Q9C005 99 aa7.76□□□□□ -1.17
HNRNPC-227ENST00000556897 MS4A5Q9H3V2 200 aa7.76□□□□□ -1.17
HNRNPC-227ENST00000556897 MTHFD2LQ9H903 347 aaPredicted RBP7.76□□□□□ -1.17
HNRNPC-227ENST00000556897 GPR35Q9HC97 309 aa7.76□□□□□ -1.17
HNRNPC-227ENST00000556897 ZNF275Q9NSD4 429 aaPredicted RBP7.76□□□□□ -1.17
HNRNPC-227ENST00000556897 ASIC5Q9NY37 505 aa7.76□□□□□ -1.17
HNRNPC-227ENST00000556897 SLC17A7Q9P2U7 560 aa7.76□□□□□ -1.17
HNRNPC-227ENST00000556897 RASD1Q9Y272 281 aa7.76□□□□□ -1.17
HNRNPC-227ENST00000556897 PCDHGB1Q9Y5G3 927 aa7.76□□□□□ -1.17
HNRNPC-227ENST00000556897 TRAV20A0A0B4J274 112 aa7.75□□□□□ -1.17
HNRNPC-227ENST00000556897 CDHR4A6H8M9 788 aa7.75□□□□□ -1.17
HNRNPC-227ENST00000556897 RPL36A-HNRNPH2H7BZ11 118 aa7.75□□□□□ -1.17
HNRNPC-227ENST00000556897 PPIHO43447 177 aaKnown RBP7.75□□□□□ -1.17
HNRNPC-227ENST00000556897 NPIPB7O75200 414 aa7.75□□□□□ -1.17
HNRNPC-227ENST00000556897 SLC43A1O75387 559 aa7.75□□□□□ -1.17
HNRNPC-227ENST00000556897 HLA-HP01893 362 aa7.75□□□□□ -1.17
HNRNPC-227ENST00000556897 DBIP07108 87 aaKnown RBP7.75□□□□□ -1.17
HNRNPC-227ENST00000556897 TFPTP0C1Z6 253 aa7.75□□□□□ -1.17
HNRNPC-227ENST00000556897 PNMTP11086 282 aa7.75□□□□□ -1.17
HNRNPC-227ENST00000556897 ZNF43P17038 809 aa7.75□□□□□ -1.17
HNRNPC-227ENST00000556897 ADRA2CP18825 462 aa7.75□□□□□ -1.17
HNRNPC-227ENST00000556897 ACAA2P42765 397 aaKnown RBP7.75□□□□□ -1.17
HNRNPC-227ENST00000556897 EVX1P49640 407 aa7.75□□□□□ -1.17
HNRNPC-227ENST00000556897 TMEM33P57088 247 aa7.75□□□□□ -1.17
HNRNPC-227ENST00000556897 COPZ1P61923 177 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms