RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 ZNF730Q6ZMV8 503 aa15.51■□□□□ 0.07
SHMT2-225ENST00000556798 NRMQ8IXM6 262 aa15.51■□□□□ 0.07
SHMT2-225ENST00000556798 SCAIQ8N9R8 606 aa15.51■□□□□ 0.07
SHMT2-225ENST00000556798 OR52J3Q8NH60 311 aa15.51■□□□□ 0.07
SHMT2-225ENST00000556798 SGTBQ96EQ0 304 aa15.51■□□□□ 0.07
SHMT2-225ENST00000556798 SF3B5Q9BWJ5 86 aaKnown RBP15.51■□□□□ 0.07
SHMT2-225ENST00000556798 KLHL4Q9C0H6 718 aa15.51■□□□□ 0.07
SHMT2-225ENST00000556798 FKRPQ9H9S5 495 aa15.51■□□□□ 0.07
SHMT2-225ENST00000556798 NANSQ9NR45 359 aa15.51■□□□□ 0.07
SHMT2-225ENST00000556798 MRPL39Q9NYK5 338 aaKnown RBP15.51■□□□□ 0.07
SHMT2-225ENST00000556798 PRSS50Q9UI38 385 aa15.51■□□□□ 0.07
SHMT2-225ENST00000556798 B3GALT5Q9Y2C3 310 aa15.51■□□□□ 0.07
SHMT2-225ENST00000556798 ASH1LQ9NR48 2969 aaKnown RBP15.51■□□□□ 0.07
SHMT2-225ENST00000556798 A0A087WUU8 490 aa15.5■□□□□ 0.07
SHMT2-225ENST00000556798 TRBV4-1A0A0J9YWV2 114 aa15.5■□□□□ 0.07
SHMT2-225ENST00000556798 VAMP5O95183 116 aa15.5■□□□□ 0.07
SHMT2-225ENST00000556798 IGHV3-9P01782 118 aa15.5■□□□□ 0.07
SHMT2-225ENST00000556798 IFI30P13284 250 aa15.5■□□□□ 0.07
SHMT2-225ENST00000556798 FUT1P19526 365 aa15.5■□□□□ 0.07
SHMT2-225ENST00000556798 OR3A2P47893 321 aa15.5■□□□□ 0.07
SHMT2-225ENST00000556798 FAM27E3Q08E93 113 aa15.5■□□□□ 0.07
SHMT2-225ENST00000556798 CASP12Q6UXS9 341 aa15.5■□□□□ 0.07
SHMT2-225ENST00000556798 MEX3BQ6ZN04 569 aaKnown RBP15.5■□□□□ 0.07
SHMT2-225ENST00000556798 CREB3L2Q70SY1 520 aa15.5■□□□□ 0.07
SHMT2-225ENST00000556798 SPATA24Q86W54 205 aa15.5■□□□□ 0.07
SHMT2-225ENST00000556798 EPHX4Q8IUS5 362 aa15.5■□□□□ 0.07
SHMT2-225ENST00000556798 ZNF100Q8IYN0 542 aa15.5■□□□□ 0.07
SHMT2-225ENST00000556798 ADGRG5Q8IZF4 528 aa15.5■□□□□ 0.07
SHMT2-225ENST00000556798 ZIC4Q8N9L1 334 aa15.5■□□□□ 0.07
SHMT2-225ENST00000556798 ADPRHL1Q8NDY3 354 aa15.5■□□□□ 0.07
SHMT2-225ENST00000556798 OR5J2Q8NH18 312 aa15.5■□□□□ 0.07
SHMT2-225ENST00000556798 SLC7A13Q8TCU3 470 aa15.5■□□□□ 0.07
SHMT2-225ENST00000556798 ACOT11Q8WXI4 607 aaPredicted RBP15.5■□□□□ 0.07
SHMT2-225ENST00000556798 LRRC46Q96FV0 321 aa15.5■□□□□ 0.07
SHMT2-225ENST00000556798 OXGR1Q96P68 337 aa15.5■□□□□ 0.07
SHMT2-225ENST00000556798 MAGIXQ9H6Y5 334 aa15.5■□□□□ 0.07
SHMT2-225ENST00000556798 ZNF229Q9UJW7 825 aa15.5■□□□□ 0.07
SHMT2-225ENST00000556798 A0A1W2PRQ8 180 aa15.49■□□□□ 0.07
SHMT2-225ENST00000556798 AQP12BA6NM10 295 aa15.49■□□□□ 0.07
SHMT2-225ENST00000556798 C11orf98E9PRG8 122 aa15.49■□□□□ 0.07
SHMT2-225ENST00000556798 MS4A18H0YCH9 400 aa15.49■□□□□ 0.07
SHMT2-225ENST00000556798 PLPP3O14495 311 aa15.49■□□□□ 0.07
SHMT2-225ENST00000556798 MRPL33O75394 65 aaKnown RBP15.49■□□□□ 0.07
SHMT2-225ENST00000556798 SERPINI2O75830 405 aa15.49■□□□□ 0.07
SHMT2-225ENST00000556798 OR7A10O76100 309 aa15.49■□□□□ 0.07
SHMT2-225ENST00000556798 ASAH2BP0C7U1 165 aa15.49■□□□□ 0.07
SHMT2-225ENST00000556798 ADORA3P0DMS8 318 aa15.49■□□□□ 0.07
SHMT2-225ENST00000556798 HLA-DOBP13765 273 aa15.49■□□□□ 0.07
SHMT2-225ENST00000556798 POU2F1P14859 743 aa15.49■□□□□ 0.07
SHMT2-225ENST00000556798 IGFBP2P18065 325 aa15.49■□□□□ 0.07
SHMT2-225ENST00000556798 AHCYP23526 432 aa15.49■□□□□ 0.07
SHMT2-225ENST00000556798 RRM2P31350 389 aa15.49■□□□□ 0.07
SHMT2-225ENST00000556798 CHRNB3Q05901 458 aa15.49■□□□□ 0.07
SHMT2-225ENST00000556798 DGCR6Q14129 220 aa15.49■□□□□ 0.07
SHMT2-225ENST00000556798 POU4F3Q15319 338 aa15.49■□□□□ 0.07
SHMT2-225ENST00000556798 SEC23BQ15437 767 aa15.49■□□□□ 0.07
SHMT2-225ENST00000556798 MS4A18Q3C1V0 323 aa15.49■□□□□ 0.07
SHMT2-225ENST00000556798 FAM98BQ52LJ0 330 aaKnown RBP15.49■□□□□ 0.07
SHMT2-225ENST00000556798 PODNL1Q6PEZ8 512 aa15.49■□□□□ 0.07
SHMT2-225ENST00000556798 ASRGL1Q7L266 308 aa15.49■□□□□ 0.07
SHMT2-225ENST00000556798 NANOGNBQ7Z5D8 188 aa15.49■□□□□ 0.07
SHMT2-225ENST00000556798 STK32CQ86UX6 486 aa15.49■□□□□ 0.07
SHMT2-225ENST00000556798 AQP12AQ8IXF9 295 aa15.49■□□□□ 0.07
SHMT2-225ENST00000556798 APH1AQ96BI3 265 aa15.49■□□□□ 0.07
SHMT2-225ENST00000556798 BPIFA2Q96DR5 249 aa15.49■□□□□ 0.07
SHMT2-225ENST00000556798 DHRS1Q96LJ7 313 aa15.49■□□□□ 0.07
SHMT2-225ENST00000556798 ANKRD19PQ9H560 264 aa15.49■□□□□ 0.07
SHMT2-225ENST00000556798 FOXD3Q9UJU5 478 aaPredicted RBP15.49■□□□□ 0.07
SHMT2-225ENST00000556798 AURKCQ9UQB9 309 aa15.49■□□□□ 0.07
SHMT2-225ENST00000556798 CRYBG3Q68DQ2 2970 aa15.49■□□□□ 0.07
SHMT2-225ENST00000556798 ALPK2Q86TB3 2170 aa15.49■□□□□ 0.07
SHMT2-225ENST00000556798 ANKHD1Q8IWZ3 2542 aaKnown RBP15.49■□□□□ 0.07
SHMT2-225ENST00000556798 DHRS12A0PJE2 317 aa15.48■□□□□ 0.07
SHMT2-225ENST00000556798 OR6A2O95222 327 aa15.48■□□□□ 0.07
SHMT2-225ENST00000556798 ZNF43P17038 809 aa15.48■□□□□ 0.07
SHMT2-225ENST00000556798 MAKP20794 623 aa15.48■□□□□ 0.07
SHMT2-225ENST00000556798 CCKARP32238 428 aa15.48■□□□□ 0.07
SHMT2-225ENST00000556798 CD79BP40259 229 aa15.48■□□□□ 0.07
SHMT2-225ENST00000556798 MAGEA2P43356 314 aa15.48■□□□□ 0.07
SHMT2-225ENST00000556798 GPR4P46093 362 aa15.48■□□□□ 0.07
SHMT2-225ENST00000556798 CLDN17P56750 224 aa15.48■□□□□ 0.07
SHMT2-225ENST00000556798 POU3F1Q03052 451 aaPredicted RBP15.48■□□□□ 0.07
SHMT2-225ENST00000556798 PRKCDQ05655 676 aa15.48■□□□□ 0.07
SHMT2-225ENST00000556798 PUDPQ08623 228 aa15.48■□□□□ 0.07
SHMT2-225ENST00000556798 C1DQ13901 141 aaKnown RBP15.48■□□□□ 0.07
SHMT2-225ENST00000556798 ZNF787Q6DD87 383 aa15.48■□□□□ 0.07
SHMT2-225ENST00000556798 MBOAT2Q6ZWT7 520 aa15.48■□□□□ 0.07
SHMT2-225ENST00000556798 AAED1Q7RTV5 226 aa15.48■□□□□ 0.07
SHMT2-225ENST00000556798 PIWIL3Q7Z3Z3 882 aaKnown RBP15.48■□□□□ 0.07
SHMT2-225ENST00000556798 UEVLDQ8IX04 471 aa15.48■□□□□ 0.07
SHMT2-225ENST00000556798 CANT1Q8WVQ1 401 aa15.48■□□□□ 0.07
SHMT2-225ENST00000556798 TMEM45BQ96B21 275 aa15.48■□□□□ 0.07
SHMT2-225ENST00000556798 ZNF347Q96SE7 839 aa15.48■□□□□ 0.07
SHMT2-225ENST00000556798 ENKD1Q9H0I2 346 aa15.48■□□□□ 0.07
SHMT2-225ENST00000556798 BLOC1S5-TXNDC5H3BN57 136 aa15.47■□□□□ 0.07
SHMT2-225ENST00000556798 TRAF3IP2O43734 574 aaPredicted RBP15.47■□□□□ 0.07
SHMT2-225ENST00000556798 GADD45GO95257 159 aa15.47■□□□□ 0.07
SHMT2-225ENST00000556798 IGF2P01344 180 aa15.47■□□□□ 0.07
SHMT2-225ENST00000556798 HIST1H2ABP04908 130 aa15.47■□□□□ 0.07
SHMT2-225ENST00000556798 SAGP10523 405 aaPredicted RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 145.6 ms