RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 VPS29Q9UBQ0 182 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 ERRFI1Q9UJM3 462 aaPredicted RBP5.69□□□□□ -1.5
TDP1-215ENST00000556498 NDRG4Q9ULP0 352 aaKnown RBP5.69□□□□□ -1.5
TDP1-215ENST00000556498 TMED3Q9Y3Q3 217 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 PTGDR2Q9Y5Y4 395 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.69□□□□□ -1.5
TDP1-215ENST00000556498 PTPRMP28827 1452 aa5.69□□□□□ -1.5
TDP1-215ENST00000556498 DCCP43146 1447 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 A0A087WUJ7 227 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 A0A1B0GTI1 187 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 A0A1W2PPC4 97 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 COLCA2A8K830 154 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 ANKRD63C9JTQ0 380 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 C9JVG2 144 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 E7EWF7 191 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 DUX1O43812 170 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 TSPAN13O95857 204 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 GH1P01241 217 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 GCGP01275 180 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 TK1P04183 234 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 CHRM2P08172 466 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 ITGA5P08648 1049 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 ALDOCP09972 364 aaKnown RBP5.68□□□□□ -1.5
TDP1-215ENST00000556498 HKR1P10072 659 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 SLC2A2P11168 524 aaPredicted RBP5.68□□□□□ -1.5
TDP1-215ENST00000556498 OSMP13725 252 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 TYRP14679 529 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 FAHP16930 419 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 TAL1P17542 331 aaPredicted RBP5.68□□□□□ -1.5
TDP1-215ENST00000556498 GZMHP20718 246 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 ACKR3P25106 362 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 ELAVL4P26378 380 aaKnown RBP5.68□□□□□ -1.5
TDP1-215ENST00000556498 AK4P27144 223 aaPredicted RBP5.68□□□□□ -1.5
TDP1-215ENST00000556498 PSMB5P28074 263 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 KDELR2P33947 212 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 DLSTP36957 453 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 RFX2P48378 723 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 CLCN3P51790 818 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 OR2B8PP59922 312 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 SRSF3P84103 164 aaKnown RBP5.68□□□□□ -1.5
TDP1-215ENST00000556498 NFATC2Q13469 925 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 MTM1Q13496 603 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 PRPSAP1Q14558 356 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 GPNMBQ14956 572 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 RBMS2Q15434 407 aaKnown RBP5.68□□□□□ -1.5
TDP1-215ENST00000556498 UGCGQ16739 394 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 SYTL3Q4VX76 610 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 GCSAMLQ5JQS6 135 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 TCTEX1D4Q5JR98 221 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 SYPL2Q5VXT5 272 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 CD276Q5ZPR3 534 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 FAM131AQ6UXB0 335 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 FBXW12Q6X9E4 464 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 CHMP1BQ7LBR1 199 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 WDR5BQ86VZ2 330 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 AMIGO3Q86WK7 504 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 LDLRAD3Q86YD5 345 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 FAM126BQ8IXS8 530 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 BOD1L2Q8IYS8 172 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 LGI3Q8N145 548 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 TMEM156Q8N614 296 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 TTC9BQ8N6N2 239 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 METTL13Q8N6R0 699 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 SAMD12Q8N8I0 201 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 KCNG3Q8TAE7 436 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 SLC2A12Q8TD20 617 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 SDR42E1Q8WUS8 393 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 SKA2Q8WVK7 121 aaPredicted RBP5.68□□□□□ -1.5
TDP1-215ENST00000556498 FCGR1BQ92637 280 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 ALG3Q92685 438 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 MIB2Q96AX9 1013 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 TMEM159Q96B96 161 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 ORAI1Q96D31 301 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 LGALS12Q96DT0 336 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 SMARCD1Q96GM5 515 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 ZNF583Q96ND8 569 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 DUX5Q96PT3 197 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 OR2M4Q96R27 311 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 ZNF300Q96RE9 604 aaPredicted RBP5.68□□□□□ -1.5
TDP1-215ENST00000556498 NPY6RQ99463 290 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 PARK7Q99497 189 aaKnown RBP5.68□□□□□ -1.5
TDP1-215ENST00000556498 TIMM29Q9BSF4 260 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 TKTL2Q9H0I9 626 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 ABCG5Q9H222 651 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 MTG2Q9H4K7 406 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 NSUN3Q9H649 340 aaKnown RBP5.68□□□□□ -1.5
TDP1-215ENST00000556498 LMAN1LQ9HAT1 526 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 ACSS2Q9NR19 701 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 RCC2Q9P258 522 aaKnown RBP5.68□□□□□ -1.5
TDP1-215ENST00000556498 LRIT1Q9P2V4 623 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 ONECUT1Q9UBC0 465 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 SLC9A2Q9UBY0 812 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 RNF150Q9ULK6 438 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 PLA2G2DQ9UNK4 145 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 TFR2Q9UP52 801 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 ENTPD2Q9Y5L3 495 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 ADAMTSL3P82987 1691 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 DLC1Q96QB1 1528 aa5.68□□□□□ -1.5
TDP1-215ENST00000556498 TECPR2O15040 1411 aa5.67□□□□□ -1.5
TDP1-215ENST00000556498 TRAV30A0A087WSZ9 112 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms