RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 C17orf78Q8N4C9 275 aa8.75□□□□□ -1.01
SCFD1-220ENST00000556486 OR2C3Q8N628 320 aa8.75□□□□□ -1.01
SCFD1-220ENST00000556486 ZNF614Q8N883 585 aa8.75□□□□□ -1.01
SCFD1-220ENST00000556486 ATP6V1C2Q8NEY4 427 aa8.75□□□□□ -1.01
SCFD1-220ENST00000556486 OR52N5Q8NH56 324 aa8.75□□□□□ -1.01
SCFD1-220ENST00000556486 OR5AK3PQ8NH89 298 aa8.75□□□□□ -1.01
SCFD1-220ENST00000556486 PIGXQ8TBF5 258 aa8.75□□□□□ -1.01
SCFD1-220ENST00000556486 TCP10LQ8TDR4 215 aa8.75□□□□□ -1.01
SCFD1-220ENST00000556486 APH1AQ96BI3 265 aa8.75□□□□□ -1.01
SCFD1-220ENST00000556486 TESCQ96BS2 214 aa8.75□□□□□ -1.01
SCFD1-220ENST00000556486 TUBGCP3Q96CW5 907 aa8.75□□□□□ -1.01
SCFD1-220ENST00000556486 DHRS9Q9BPW9 319 aa8.75□□□□□ -1.01
SCFD1-220ENST00000556486 ROPN1BQ9BZX4 212 aaPredicted RBP8.75□□□□□ -1.01
SCFD1-220ENST00000556486 WDR12Q9GZL7 423 aaKnown RBP8.75□□□□□ -1.01
SCFD1-220ENST00000556486 ROPN1Q9HAT0 212 aaPredicted RBP8.75□□□□□ -1.01
SCFD1-220ENST00000556486 ASB6Q9NWX5 421 aa8.75□□□□□ -1.01
SCFD1-220ENST00000556486 TRAPPC4Q9Y296 219 aa8.75□□□□□ -1.01
SCFD1-220ENST00000556486 LRCH1Q9Y2L9 728 aa8.75□□□□□ -1.01
SCFD1-220ENST00000556486 PRSS51A0A1B0GVH4 220 aa8.74□□□□□ -1.01
SCFD1-220ENST00000556486 LRP5LA4QPB2 252 aa8.74□□□□□ -1.01
SCFD1-220ENST00000556486 FAAHO00519 579 aa8.74□□□□□ -1.01
SCFD1-220ENST00000556486 CFLARO15519 480 aa8.74□□□□□ -1.01
SCFD1-220ENST00000556486 TYROBPO43914 113 aa8.74□□□□□ -1.01
SCFD1-220ENST00000556486 EIF1BO60739 113 aaKnown RBP8.74□□□□□ -1.01
SCFD1-220ENST00000556486 SKAP2O75563 359 aaPredicted RBP8.74□□□□□ -1.01
SCFD1-220ENST00000556486 VENTXO95231 258 aa8.74□□□□□ -1.01
SCFD1-220ENST00000556486 IGHV3-9P01782 118 aa8.74□□□□□ -1.01
SCFD1-220ENST00000556486 UBTFL6P0CB48 400 aaPredicted RBP8.74□□□□□ -1.01
SCFD1-220ENST00000556486 TXNL4AP83876 142 aaKnown RBP8.74□□□□□ -1.01
SCFD1-220ENST00000556486 FUT5Q11128 374 aa8.74□□□□□ -1.01
SCFD1-220ENST00000556486 PDCD2Q16342 344 aaPredicted RBP8.74□□□□□ -1.01
SCFD1-220ENST00000556486 GABRA6Q16445 453 aa8.74□□□□□ -1.01
SCFD1-220ENST00000556486 IQCCQ4KMZ1 466 aa8.74□□□□□ -1.01
SCFD1-220ENST00000556486 SAXO2Q658L1 398 aa8.74□□□□□ -1.01
SCFD1-220ENST00000556486 EMBQ6PCB8 327 aa8.74□□□□□ -1.01
SCFD1-220ENST00000556486 KLHL17Q6TDP4 642 aa8.74□□□□□ -1.01
SCFD1-220ENST00000556486 FRRS1Q6ZNA5 592 aa8.74□□□□□ -1.01
SCFD1-220ENST00000556486 RINLQ6ZS11 566 aa8.74□□□□□ -1.01
SCFD1-220ENST00000556486 C16orf62Q7Z3J2 963 aa8.74□□□□□ -1.01
SCFD1-220ENST00000556486 ADGRG3Q86Y34 549 aa8.74□□□□□ -1.01
SCFD1-220ENST00000556486 CLECL1Q8IZS7 167 aa8.74□□□□□ -1.01
SCFD1-220ENST00000556486 RFLNBQ8N5W9 214 aa8.74□□□□□ -1.01
SCFD1-220ENST00000556486 C3orf56Q8N813 242 aa8.74□□□□□ -1.01
SCFD1-220ENST00000556486 RFWD2Q8NHY2 731 aa8.74□□□□□ -1.01
SCFD1-220ENST00000556486 AGR3Q8TD06 166 aa8.74□□□□□ -1.01
SCFD1-220ENST00000556486 PROX1Q92786 737 aa8.74□□□□□ -1.01
SCFD1-220ENST00000556486 ZHX1-C8orf76Q96EF9 292 aa8.74□□□□□ -1.01
SCFD1-220ENST00000556486 NEURL3Q96EH8 262 aa8.74□□□□□ -1.01
SCFD1-220ENST00000556486 ARL5BQ96KC2 179 aa8.74□□□□□ -1.01
SCFD1-220ENST00000556486 SLC35G5Q96KT7 338 aa8.74□□□□□ -1.01
SCFD1-220ENST00000556486 INPP5KQ9BT40 448 aa8.74□□□□□ -1.01
SCFD1-220ENST00000556486 ZNF69Q9UC07 566 aa8.74□□□□□ -1.01
SCFD1-220ENST00000556486 HAO1Q9UJM8 370 aa8.74□□□□□ -1.01
SCFD1-220ENST00000556486 MKLN1Q9UL63 735 aa8.74□□□□□ -1.01
SCFD1-220ENST00000556486 NOSIPQ9Y314 301 aaKnown RBP8.74□□□□□ -1.01
SCFD1-220ENST00000556486 WDR45Q9Y484 360 aa8.74□□□□□ -1.01
SCFD1-220ENST00000556486 TCRBV5S2A0A599 114 aa8.73□□□□□ -1.01
SCFD1-220ENST00000556486 M0R1B8 84 aa8.73□□□□□ -1.01
SCFD1-220ENST00000556486 ZNF208O43345 1280 aa8.73□□□□□ -1.01
SCFD1-220ENST00000556486 BCAS1O75363 584 aaPredicted RBP8.73□□□□□ -1.01
SCFD1-220ENST00000556486 RAD51DO75771 328 aa8.73□□□□□ -1.01
SCFD1-220ENST00000556486 ITGA5P08648 1049 aa8.73□□□□□ -1.01
SCFD1-220ENST00000556486 UQCRC2P22695 453 aa8.73□□□□□ -1.01
SCFD1-220ENST00000556486 IL2RGP31785 369 aa8.73□□□□□ -1.01
SCFD1-220ENST00000556486 SOAT1P35610 550 aa8.73□□□□□ -1.01
SCFD1-220ENST00000556486 NR4A2P43354 598 aa8.73□□□□□ -1.01
SCFD1-220ENST00000556486 EFNA4P52798 201 aa8.73□□□□□ -1.01
SCFD1-220ENST00000556486 KCNJ10P78508 379 aa8.73□□□□□ -1.01
SCFD1-220ENST00000556486 MALLQ13021 153 aa8.73□□□□□ -1.01
SCFD1-220ENST00000556486 CASP8Q14790 479 aa8.73□□□□□ -1.01
SCFD1-220ENST00000556486 ATAD3BQ5T9A4 648 aa8.73□□□□□ -1.01
SCFD1-220ENST00000556486 ANXA8L1Q5VT79 327 aa8.73□□□□□ -1.01
SCFD1-220ENST00000556486 OR4F3Q6IEY1 312 aa8.73□□□□□ -1.01
SCFD1-220ENST00000556486 KIRREL3Q8IZU9 778 aa8.73□□□□□ -1.01
SCFD1-220ENST00000556486 ANKS4BQ8N8V4 417 aa8.73□□□□□ -1.01
SCFD1-220ENST00000556486 ROPN1LQ96C74 230 aa8.73□□□□□ -1.01
SCFD1-220ENST00000556486 ZG16BQ96DA0 208 aa8.73□□□□□ -1.01
SCFD1-220ENST00000556486 HRASLS5Q96KN8 279 aa8.73□□□□□ -1.01
SCFD1-220ENST00000556486 FOXN4Q96NZ1 517 aa8.73□□□□□ -1.01
SCFD1-220ENST00000556486 FOXB1Q99853 325 aa8.73□□□□□ -1.01
SCFD1-220ENST00000556486 PIMREGQ9BSJ6 248 aa8.73□□□□□ -1.01
SCFD1-220ENST00000556486 TMEM109Q9BVC6 243 aa8.73□□□□□ -1.01
SCFD1-220ENST00000556486 OR51I1Q9H343 314 aa8.73□□□□□ -1.01
SCFD1-220ENST00000556486 CTPS2Q9NRF8 586 aa8.73□□□□□ -1.01
SCFD1-220ENST00000556486 PARPBPQ9NWS1 579 aa8.73□□□□□ -1.01
SCFD1-220ENST00000556486 TMEM181Q9P2C4 612 aa8.73□□□□□ -1.01
SCFD1-220ENST00000556486 PCDHGB4Q9UN71 923 aa8.73□□□□□ -1.01
SCFD1-220ENST00000556486 SLC9A8Q9Y2E8 581 aa8.73□□□□□ -1.01
SCFD1-220ENST00000556486 CIB4A0PJX0 185 aa8.72□□□□□ -1.01
SCFD1-220ENST00000556486 AGAP5A6NIR3 686 aa8.72□□□□□ -1.01
SCFD1-220ENST00000556486 VWC2LB2RUY7 222 aa8.72□□□□□ -1.01
SCFD1-220ENST00000556486 SPAG7O75391 227 aa8.72□□□□□ -1.01
SCFD1-220ENST00000556486 MRPL33O75394 65 aaKnown RBP8.72□□□□□ -1.01
SCFD1-220ENST00000556486 CYP7B1O75881 506 aa8.72□□□□□ -1.01
SCFD1-220ENST00000556486 CSF3P09919 207 aa8.72□□□□□ -1.01
SCFD1-220ENST00000556486 OR12D1P0DN82 309 aa8.72□□□□□ -1.01
SCFD1-220ENST00000556486 RPS4Y1P22090 263 aaKnown RBP8.72□□□□□ -1.01
SCFD1-220ENST00000556486 PAX7P23759 505 aa8.72□□□□□ -1.01
SCFD1-220ENST00000556486 MAGEA8P43361 318 aa8.72□□□□□ -1.01
SCFD1-220ENST00000556486 TGFBR3Q03167 851 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms