RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 KCNN3Q9UGI6 736 aa8.55□□□□□ -1.04
SRP54-210ENST00000556380 RIMS3Q9UJD0 308 aa8.55□□□□□ -1.04
SRP54-210ENST00000556380 A4GNTQ9UNA3 340 aa8.55□□□□□ -1.04
SRP54-210ENST00000556380 FLVCR1Q9Y5Y0 555 aa8.55□□□□□ -1.04
SRP54-210ENST00000556380 ROS1P08922 2347 aa8.55□□□□□ -1.04
SRP54-210ENST00000556380 LOC102725191A0A1B0GVB3 256 aa8.54□□□□□ -1.04
SRP54-210ENST00000556380 FAM221AA4D161 298 aa8.54□□□□□ -1.04
SRP54-210ENST00000556380 GPR171O14626 319 aa8.54□□□□□ -1.04
SRP54-210ENST00000556380 UBOX5O94941 541 aa8.54□□□□□ -1.04
SRP54-210ENST00000556380 VAMP5O95183 116 aa8.54□□□□□ -1.04
SRP54-210ENST00000556380 ZNF682O95780 498 aa8.54□□□□□ -1.04
SRP54-210ENST00000556380 THRBP10828 461 aa8.54□□□□□ -1.04
SRP54-210ENST00000556380 POU2F1P14859 743 aa8.54□□□□□ -1.04
SRP54-210ENST00000556380 GRPRP30550 384 aa8.54□□□□□ -1.04
SRP54-210ENST00000556380 UGT2B10P36537 528 aa8.54□□□□□ -1.04
SRP54-210ENST00000556380 KIR2DL3P43628 341 aa8.54□□□□□ -1.04
SRP54-210ENST00000556380 DAZAP2Q15038 168 aaPredicted RBP8.54□□□□□ -1.04
SRP54-210ENST00000556380 POU4F3Q15319 338 aa8.54□□□□□ -1.04
SRP54-210ENST00000556380 IFI44LQ53G44 452 aa8.54□□□□□ -1.04
SRP54-210ENST00000556380 DEF8Q6ZN54 512 aa8.54□□□□□ -1.04
SRP54-210ENST00000556380 BEND4Q6ZU67 534 aa8.54□□□□□ -1.04
SRP54-210ENST00000556380 EPHX4Q8IUS5 362 aa8.54□□□□□ -1.04
SRP54-210ENST00000556380 NKAIN4Q8IVV8 208 aa8.54□□□□□ -1.04
SRP54-210ENST00000556380 ARHGAP24Q8N264 748 aa8.54□□□□□ -1.04
SRP54-210ENST00000556380 FAM86B1Q8N7N1 296 aa8.54□□□□□ -1.04
SRP54-210ENST00000556380 ADPRHL1Q8NDY3 354 aa8.54□□□□□ -1.04
SRP54-210ENST00000556380 GEMIN6Q8WXD5 167 aaKnown RBP8.54□□□□□ -1.04
SRP54-210ENST00000556380 LZICQ8WZA0 190 aa8.54□□□□□ -1.04
SRP54-210ENST00000556380 FAM162AQ96A26 154 aa8.54□□□□□ -1.04
SRP54-210ENST00000556380 TMEM45BQ96B21 275 aa8.54□□□□□ -1.04
SRP54-210ENST00000556380 SLC25A36Q96CQ1 311 aa8.54□□□□□ -1.04
SRP54-210ENST00000556380 HSH2DQ96JZ2 352 aa8.54□□□□□ -1.04
SRP54-210ENST00000556380 MOGAT1Q96PD6 335 aa8.54□□□□□ -1.04
SRP54-210ENST00000556380 EPYCQ99645 322 aa8.54□□□□□ -1.04
SRP54-210ENST00000556380 TAPBPLQ9BX59 468 aa8.54□□□□□ -1.04
SRP54-210ENST00000556380 SLC19A3Q9BZV2 496 aa8.54□□□□□ -1.04
SRP54-210ENST00000556380 C1orf21Q9H246 121 aa8.54□□□□□ -1.04
SRP54-210ENST00000556380 MEPEQ9NQ76 525 aaPredicted RBP8.54□□□□□ -1.04
SRP54-210ENST00000556380 MAN2C1Q9NTJ4 1040 aa8.54□□□□□ -1.04
SRP54-210ENST00000556380 SELENONQ9NZV5 590 aa8.54□□□□□ -1.04
SRP54-210ENST00000556380 EMC3Q9P0I2 261 aa8.54□□□□□ -1.04
SRP54-210ENST00000556380 PRSS50Q9UI38 385 aa8.54□□□□□ -1.04
SRP54-210ENST00000556380 SLC7A7Q9UM01 511 aa8.54□□□□□ -1.04
SRP54-210ENST00000556380 RASD1Q9Y272 281 aa8.54□□□□□ -1.04
SRP54-210ENST00000556380 B3GALT5Q9Y2C3 310 aa8.54□□□□□ -1.04
SRP54-210ENST00000556380 CREBBPQ92793 2442 aa8.53□□□□□ -1.04
SRP54-210ENST00000556380 TUBAL3A6NHL2 446 aa8.53□□□□□ -1.04
SRP54-210ENST00000556380 LRRN3E7EW58 273 aa8.53□□□□□ -1.04
SRP54-210ENST00000556380 MS4A18H0YCH9 400 aa8.53□□□□□ -1.04
SRP54-210ENST00000556380 C16orf97H3BN30 126 aa8.53□□□□□ -1.04
SRP54-210ENST00000556380 M0R082 166 aa8.53□□□□□ -1.04
SRP54-210ENST00000556380 PDLIM1O00151 329 aa8.53□□□□□ -1.04
SRP54-210ENST00000556380 ARPC2O15144 300 aa8.53□□□□□ -1.04
SRP54-210ENST00000556380 CNOT4O95628 575 aaKnown RBP8.53□□□□□ -1.04
SRP54-210ENST00000556380 HPRP00739 348 aa8.53□□□□□ -1.04
SRP54-210ENST00000556380 IGF2P01344 180 aa8.53□□□□□ -1.04
SRP54-210ENST00000556380 SEMG1P04279 462 aa8.53□□□□□ -1.04
SRP54-210ENST00000556380 IFNW1P05000 195 aa8.53□□□□□ -1.04
SRP54-210ENST00000556380 FAM157BP0CG42 384 aa8.53□□□□□ -1.04
SRP54-210ENST00000556380 TCN1P20061 433 aaPredicted RBP8.53□□□□□ -1.04
SRP54-210ENST00000556380 PSMB1P20618 241 aaKnown RBP8.53□□□□□ -1.04
SRP54-210ENST00000556380 PTNP21246 168 aa8.53□□□□□ -1.04
SRP54-210ENST00000556380 RBM34P42696 430 aaKnown RBP8.53□□□□□ -1.04
SRP54-210ENST00000556380 TAS2R41P59536 307 aa8.53□□□□□ -1.04
SRP54-210ENST00000556380 MFSD13AQ14CX5 517 aa8.53□□□□□ -1.04
SRP54-210ENST00000556380 ZNF74Q16587 644 aa8.53□□□□□ -1.04
SRP54-210ENST00000556380 EXOC3L2Q2M3D2 409 aa8.53□□□□□ -1.04
SRP54-210ENST00000556380 MS4A18Q3C1V0 323 aa8.53□□□□□ -1.04
SRP54-210ENST00000556380 TMEM225Q6GV28 225 aa8.53□□□□□ -1.04
SRP54-210ENST00000556380 Q6ZT83 130 aa8.53□□□□□ -1.04
SRP54-210ENST00000556380 CREB3L2Q70SY1 520 aa8.53□□□□□ -1.04
SRP54-210ENST00000556380 H1FNTQ75WM6 255 aaPredicted RBP8.53□□□□□ -1.04
SRP54-210ENST00000556380 STK32CQ86UX6 486 aa8.53□□□□□ -1.04
SRP54-210ENST00000556380 OFCC1Q8IZS5 231 aa8.53□□□□□ -1.04
SRP54-210ENST00000556380 KDM8Q8N371 416 aa8.53□□□□□ -1.04
SRP54-210ENST00000556380 SCAIQ8N9R8 606 aa8.53□□□□□ -1.04
SRP54-210ENST00000556380 ZNF417Q8TAU3 575 aa8.53□□□□□ -1.04
SRP54-210ENST00000556380 SLC7A6OSQ96CW6 309 aaPredicted RBP8.53□□□□□ -1.04
SRP54-210ENST00000556380 PRRC1Q96M27 445 aa8.53□□□□□ -1.04
SRP54-210ENST00000556380 DACH2Q96NX9 599 aa8.53□□□□□ -1.04
SRP54-210ENST00000556380 WFIKKN1Q96NZ8 548 aa8.53□□□□□ -1.04
SRP54-210ENST00000556380 ZNF385AQ96PM9 386 aaKnown RBP8.53□□□□□ -1.04
SRP54-210ENST00000556380 ZNF587Q96SQ5 575 aaPredicted RBP8.53□□□□□ -1.04
SRP54-210ENST00000556380 FANCFQ9NPI8 374 aa8.53□□□□□ -1.04
SRP54-210ENST00000556380 MRPL39Q9NYK5 338 aaKnown RBP8.53□□□□□ -1.04
SRP54-210ENST00000556380 MAGEL2Q9UJ55 1249 aa8.53□□□□□ -1.04
SRP54-210ENST00000556380 RPS6KA6Q9UK32 745 aa8.53□□□□□ -1.04
SRP54-210ENST00000556380 GPR52Q9Y2T5 361 aa8.53□□□□□ -1.04
SRP54-210ENST00000556380 NOSIPQ9Y314 301 aaKnown RBP8.53□□□□□ -1.04
SRP54-210ENST00000556380 TESMINQ9Y4I5 508 aa8.53□□□□□ -1.04
SRP54-210ENST00000556380 CORINQ9Y5Q5 1042 aa8.53□□□□□ -1.04
SRP54-210ENST00000556380 ENPP4Q9Y6X5 453 aa8.53□□□□□ -1.04
SRP54-210ENST00000556380 AKAP9Q99996 3911 aa8.53□□□□□ -1.04
SRP54-210ENST00000556380 MYO9AB2RTY4 2548 aa8.52□□□□□ -1.04
SRP54-210ENST00000556380 J3KTA2 159 aa8.52□□□□□ -1.05
SRP54-210ENST00000556380 PLPP3O14495 311 aa8.52□□□□□ -1.05
SRP54-210ENST00000556380 TRAF3IP2O43734 574 aaPredicted RBP8.52□□□□□ -1.05
SRP54-210ENST00000556380 MRPL33O75394 65 aaKnown RBP8.52□□□□□ -1.05
SRP54-210ENST00000556380 ZNF432O94892 652 aa8.52□□□□□ -1.05
SRP54-210ENST00000556380 ADAP00813 363 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 148.1 ms