RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 NCALDP61601 193 aa11.05□□□□□ -0.64
SNX6-207ENST00000556303 CLEC12BQ2HXU8 276 aa11.05□□□□□ -0.64
SNX6-207ENST00000556303 ALG10BQ5I7T1 473 aa11.05□□□□□ -0.64
SNX6-207ENST00000556303 H1FNTQ75WM6 255 aaPredicted RBP11.05□□□□□ -0.64
SNX6-207ENST00000556303 DHDDSQ86SQ9 333 aa11.05□□□□□ -0.64
SNX6-207ENST00000556303 RANBP3LQ86VV4 465 aaPredicted RBP11.05□□□□□ -0.64
SNX6-207ENST00000556303 ARMC8Q8IUR7 673 aa11.05□□□□□ -0.64
SNX6-207ENST00000556303 EPHX4Q8IUS5 362 aa11.05□□□□□ -0.64
SNX6-207ENST00000556303 CIARTQ8N365 385 aaPredicted RBP11.05□□□□□ -0.64
SNX6-207ENST00000556303 FAM169BQ8N8A8 192 aa11.05□□□□□ -0.64
SNX6-207ENST00000556303 ADAD1Q96M93 576 aaKnown RBP11.05□□□□□ -0.64
SNX6-207ENST00000556303 CGREF1Q99674 301 aa11.05□□□□□ -0.64
SNX6-207ENST00000556303 SMR3AQ99954 134 aa11.05□□□□□ -0.64
SNX6-207ENST00000556303 CPPED1Q9BRF8 314 aaPredicted RBP11.05□□□□□ -0.64
SNX6-207ENST00000556303 CBLN4Q9NTU7 201 aa11.05□□□□□ -0.64
SNX6-207ENST00000556303 POU2F3Q9UKI9 436 aa11.05□□□□□ -0.64
SNX6-207ENST00000556303 SONP18583 2426 aaKnown RBP11.05□□□□□ -0.64
SNX6-207ENST00000556303 ARPC4-TTLL3A0A0A6YYG9 625 aa11.04□□□□□ -0.64
SNX6-207ENST00000556303 A0A0B4J2E0 115 aa11.04□□□□□ -0.64
SNX6-207ENST00000556303 A0A1B0GX12 115 aa11.04□□□□□ -0.64
SNX6-207ENST00000556303 TRIM64A6NGJ6 449 aa11.04□□□□□ -0.64
SNX6-207ENST00000556303 TRIM64BA6NI03 449 aa11.04□□□□□ -0.64
SNX6-207ENST00000556303 E7EQL1 145 aa11.04□□□□□ -0.64
SNX6-207ENST00000556303 M0R1B8 84 aa11.04□□□□□ -0.64
SNX6-207ENST00000556303 ZNF432O94892 652 aa11.04□□□□□ -0.64
SNX6-207ENST00000556303 MFN2O95140 757 aa11.04□□□□□ -0.64
SNX6-207ENST00000556303 LY6G6DO95868 133 aa11.04□□□□□ -0.64
SNX6-207ENST00000556303 NPPAP01160 153 aa11.04□□□□□ -0.64
SNX6-207ENST00000556303 VIMP08670 466 aaKnown RBP11.04□□□□□ -0.64
SNX6-207ENST00000556303 HTR2AP28223 471 aa11.04□□□□□ -0.64
SNX6-207ENST00000556303 RPS5P46782 204 aaKnown RBP11.04□□□□□ -0.64
SNX6-207ENST00000556303 DSCR9P59020 149 aa11.04□□□□□ -0.64
SNX6-207ENST00000556303 HOXC5Q00444 222 aa11.04□□□□□ -0.64
SNX6-207ENST00000556303 DNM1P46Q6ZS02 220 aa11.04□□□□□ -0.64
SNX6-207ENST00000556303 CCDC36Q8IYA8 594 aa11.04□□□□□ -0.64
SNX6-207ENST00000556303 FBXL14Q8N1E6 418 aa11.04□□□□□ -0.64
SNX6-207ENST00000556303 C10orf111Q8N326 155 aa11.04□□□□□ -0.64
SNX6-207ENST00000556303 MUC15Q8N387 334 aa11.04□□□□□ -0.64
SNX6-207ENST00000556303 SCAIQ8N9R8 606 aa11.04□□□□□ -0.64
SNX6-207ENST00000556303 RASSF5Q8WWW0 418 aa11.04□□□□□ -0.64
SNX6-207ENST00000556303 SLC25A36Q96CQ1 311 aa11.04□□□□□ -0.64
SNX6-207ENST00000556303 KTI12Q96EK9 354 aaPredicted RBP11.04□□□□□ -0.64
SNX6-207ENST00000556303 SLC41A3Q96GZ6 507 aa11.04□□□□□ -0.64
SNX6-207ENST00000556303 HS6ST2Q96MM7 605 aa11.04□□□□□ -0.64
SNX6-207ENST00000556303 SH3GL1Q99961 368 aa11.04□□□□□ -0.64
SNX6-207ENST00000556303 TMEM43Q9BTV4 400 aa11.04□□□□□ -0.64
SNX6-207ENST00000556303 RSPO3Q9BXY4 272 aaPredicted RBP11.04□□□□□ -0.64
SNX6-207ENST00000556303 IKZF5Q9H5V7 419 aa11.04□□□□□ -0.64
SNX6-207ENST00000556303 TPST1O60507 370 aa11.03□□□□□ -0.64
SNX6-207ENST00000556303 SLC43A1O75387 559 aa11.03□□□□□ -0.64
SNX6-207ENST00000556303 LGI1O95970 557 aa11.03□□□□□ -0.64
SNX6-207ENST00000556303 APOBEC3AP31941 199 aaPredicted RBP11.03□□□□□ -0.64
SNX6-207ENST00000556303 CDKN1AP38936 164 aa11.03□□□□□ -0.64
SNX6-207ENST00000556303 SELENOPP49908 381 aa11.03□□□□□ -0.64
SNX6-207ENST00000556303 RGS8P57771 180 aaPredicted RBP11.03□□□□□ -0.64
SNX6-207ENST00000556303 TNK1Q13470 666 aa11.03□□□□□ -0.64
SNX6-207ENST00000556303 OR1Q1Q15612 314 aa11.03□□□□□ -0.64
SNX6-207ENST00000556303 COQ5Q5HYK3 327 aa11.03□□□□□ -0.64
SNX6-207ENST00000556303 INTS11Q5TA45 600 aaKnown RBP11.03□□□□□ -0.64
SNX6-207ENST00000556303 C11orf71Q6IPW1 123 aa11.03□□□□□ -0.64
SNX6-207ENST00000556303 HMBOX1Q6NT76 420 aa11.03□□□□□ -0.64
SNX6-207ENST00000556303 NIPAL3Q6P499 406 aa11.03□□□□□ -0.64
SNX6-207ENST00000556303 ANKRD16Q6P6B7 361 aa11.03□□□□□ -0.64
SNX6-207ENST00000556303 ZNF613Q6PF04 617 aa11.03□□□□□ -0.64
SNX6-207ENST00000556303 PATL1Q86TB9 770 aaKnown RBP11.03□□□□□ -0.64
SNX6-207ENST00000556303 PTOV1Q86YD1 416 aa11.03□□□□□ -0.64
SNX6-207ENST00000556303 OR1K1Q8NGR3 316 aa11.03□□□□□ -0.64
SNX6-207ENST00000556303 TAAR8Q969N4 342 aa11.03□□□□□ -0.64
SNX6-207ENST00000556303 LRR1Q96L50 414 aa11.03□□□□□ -0.64
SNX6-207ENST00000556303 KAT8Q9H7Z6 458 aaKnown RBP11.03□□□□□ -0.64
SNX6-207ENST00000556303 NPHS2Q9NP85 383 aa11.03□□□□□ -0.64
SNX6-207ENST00000556303 CRNNQ9UBG3 495 aaPredicted RBP11.03□□□□□ -0.64
SNX6-207ENST00000556303 FBXO9Q9UK97 447 aaPredicted RBP11.03□□□□□ -0.64
SNX6-207ENST00000556303 ATRQ13535 2644 aa11.02□□□□□ -0.65
SNX6-207ENST00000556303 IGKV1D-42A0A075B6H8 117 aa11.02□□□□□ -0.65
SNX6-207ENST00000556303 A0A0G2JND7 137 aa11.02□□□□□ -0.65
SNX6-207ENST00000556303 A0A1W2PR80 420 aa11.02□□□□□ -0.65
SNX6-207ENST00000556303 H7C417 338 aa11.02□□□□□ -0.65
SNX6-207ENST00000556303 SMAD7O15105 426 aaKnown RBP11.02□□□□□ -0.65
SNX6-207ENST00000556303 MT-ATP6P00846 226 aa11.02□□□□□ -0.65
SNX6-207ENST00000556303 IGHV4-39P01824 125 aa11.02□□□□□ -0.65
SNX6-207ENST00000556303 FABP6P51161 128 aa11.02□□□□□ -0.65
SNX6-207ENST00000556303 UBE2NP61088 152 aaKnown RBP11.02□□□□□ -0.65
SNX6-207ENST00000556303 CHRNB3Q05901 458 aa11.02□□□□□ -0.65
SNX6-207ENST00000556303 DMTNQ08495 405 aa11.02□□□□□ -0.65
SNX6-207ENST00000556303 C1DQ13901 141 aaKnown RBP11.02□□□□□ -0.65
SNX6-207ENST00000556303 CYLC2Q14093 348 aaPredicted RBP11.02□□□□□ -0.65
SNX6-207ENST00000556303 VEZF1Q14119 521 aa11.02□□□□□ -0.65
SNX6-207ENST00000556303 CYP51A1Q16850 503 aa11.02□□□□□ -0.65
SNX6-207ENST00000556303 TBRG1Q3YBR2 411 aa11.02□□□□□ -0.65
SNX6-207ENST00000556303 GLIPR1L2Q4G1C9 344 aa11.02□□□□□ -0.65
SNX6-207ENST00000556303 C9orf135Q5VTT2 229 aa11.02□□□□□ -0.65
SNX6-207ENST00000556303 RETREG3Q86VR2 466 aa11.02□□□□□ -0.65
SNX6-207ENST00000556303 COMTD1Q86VU5 262 aa11.02□□□□□ -0.65
SNX6-207ENST00000556303 PIK3C3Q8NEB9 887 aa11.02□□□□□ -0.65
SNX6-207ENST00000556303 BCL2L2Q92843 193 aaPredicted RBP11.02□□□□□ -0.65
SNX6-207ENST00000556303 ARHGDIGQ99819 225 aa11.02□□□□□ -0.65
SNX6-207ENST00000556303 KATNB1Q9BVA0 655 aa11.02□□□□□ -0.65
SNX6-207ENST00000556303 ASPNQ9BXN1 380 aa11.02□□□□□ -0.65
SNX6-207ENST00000556303 KLHL14Q9P2G3 628 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms