RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 HOXB9P17482 250 aaPredicted RBP11.54□□□□□ -0.56
TGFB3-204ENST00000556285 CBLP22681 906 aa11.54□□□□□ -0.56
TGFB3-204ENST00000556285 IGFBP5P24593 272 aa11.54□□□□□ -0.56
TGFB3-204ENST00000556285 SERPINF1P36955 418 aa11.54□□□□□ -0.56
TGFB3-204ENST00000556285 NR4A2P43354 598 aa11.54□□□□□ -0.56
TGFB3-204ENST00000556285 PDLIM4P50479 330 aa11.54□□□□□ -0.56
TGFB3-204ENST00000556285 POLR2JP52435 117 aaKnown RBP11.54□□□□□ -0.56
TGFB3-204ENST00000556285 CLDN17P56750 224 aa11.54□□□□□ -0.56
TGFB3-204ENST00000556285 ARF1P84077 181 aaKnown RBP11.54□□□□□ -0.56
TGFB3-204ENST00000556285 NAAAQ02083 359 aa11.54□□□□□ -0.56
TGFB3-204ENST00000556285 HGFACQ04756 655 aa11.54□□□□□ -0.56
TGFB3-204ENST00000556285 RGNQ15493 299 aa11.54□□□□□ -0.56
TGFB3-204ENST00000556285 CARTPTQ16568 116 aa11.54□□□□□ -0.56
TGFB3-204ENST00000556285 ZNF311Q5JNZ3 666 aa11.54□□□□□ -0.56
TGFB3-204ENST00000556285 ABHD12BQ7Z5M8 362 aaPredicted RBP11.54□□□□□ -0.56
TGFB3-204ENST00000556285 MFSD8Q8NHS3 518 aa11.54□□□□□ -0.56
TGFB3-204ENST00000556285 STK35Q8TDR2 534 aa11.54□□□□□ -0.56
TGFB3-204ENST00000556285 GTF2H4Q92759 462 aa11.54□□□□□ -0.56
TGFB3-204ENST00000556285 VRK1Q99986 396 aaPredicted RBP11.54□□□□□ -0.56
TGFB3-204ENST00000556285 A4GALTQ9NPC4 353 aa11.54□□□□□ -0.56
TGFB3-204ENST00000556285 SLC25A37Q9NYZ2 338 aa11.54□□□□□ -0.56
TGFB3-204ENST00000556285 B3GAT1Q9P2W7 334 aa11.54□□□□□ -0.56
TGFB3-204ENST00000556285 CRNNQ9UBG3 495 aaPredicted RBP11.54□□□□□ -0.56
TGFB3-204ENST00000556285 ZNF232Q9UNY5 417 aa11.54□□□□□ -0.56
TGFB3-204ENST00000556285 RASD1Q9Y272 281 aa11.54□□□□□ -0.56
TGFB3-204ENST00000556285 IGKV1D-42A0A075B6H8 117 aa11.53□□□□□ -0.56
TGFB3-204ENST00000556285 ARPC4-TTLL3A0A0A6YYG9 625 aa11.53□□□□□ -0.56
TGFB3-204ENST00000556285 CLIC1O00299 241 aa11.53□□□□□ -0.56
TGFB3-204ENST00000556285 UBDO15205 165 aa11.53□□□□□ -0.56
TGFB3-204ENST00000556285 LMX1BO60663 402 aa11.53□□□□□ -0.56
TGFB3-204ENST00000556285 SEC14L2O76054 403 aa11.53□□□□□ -0.56
TGFB3-204ENST00000556285 ZNF432O94892 652 aa11.53□□□□□ -0.56
TGFB3-204ENST00000556285 VAMP5O95183 116 aa11.53□□□□□ -0.56
TGFB3-204ENST00000556285 IGLV1-44P01699 117 aa11.53□□□□□ -0.56
TGFB3-204ENST00000556285 CRYAAP02489 173 aa11.53□□□□□ -0.56
TGFB3-204ENST00000556285 CSF3P09919 207 aa11.53□□□□□ -0.56
TGFB3-204ENST00000556285 BMP4P12644 408 aa11.53□□□□□ -0.56
TGFB3-204ENST00000556285 HTR2AP28223 471 aa11.53□□□□□ -0.56
TGFB3-204ENST00000556285 UBE2NP61088 152 aaKnown RBP11.53□□□□□ -0.56
TGFB3-204ENST00000556285 GLIPR1L2Q4G1C9 344 aa11.53□□□□□ -0.56
TGFB3-204ENST00000556285 PHYHD1Q5SRE7 291 aa11.53□□□□□ -0.56
TGFB3-204ENST00000556285 MSANTD1Q6ZTZ1 278 aa11.53□□□□□ -0.56
TGFB3-204ENST00000556285 SLC46A3Q7Z3Q1 461 aa11.53□□□□□ -0.56
TGFB3-204ENST00000556285 WDFY1Q8IWB7 410 aa11.53□□□□□ -0.56
TGFB3-204ENST00000556285 MSRB3Q8IXL7 192 aa11.53□□□□□ -0.56
TGFB3-204ENST00000556285 ZCCHC24Q8N2G6 241 aaKnown RBP11.53□□□□□ -0.56
TGFB3-204ENST00000556285 TMEM158Q8WZ71 300 aa11.53□□□□□ -0.56
TGFB3-204ENST00000556285 TAAR8Q969N4 342 aa11.53□□□□□ -0.56
TGFB3-204ENST00000556285 MSI2Q96DH6 328 aaKnown RBP11.53□□□□□ -0.56
TGFB3-204ENST00000556285 KCNS3Q9BQ31 491 aa11.53□□□□□ -0.56
TGFB3-204ENST00000556285 SOX7Q9BT81 388 aa11.53□□□□□ -0.56
TGFB3-204ENST00000556285 KATNB1Q9BVA0 655 aa11.53□□□□□ -0.56
TGFB3-204ENST00000556285 LINC00470Q9BZP3 86 aa11.53□□□□□ -0.56
TGFB3-204ENST00000556285 RMND5AQ9H871 391 aa11.53□□□□□ -0.56
TGFB3-204ENST00000556285 CHODLQ9H9P2 273 aa11.53□□□□□ -0.56
TGFB3-204ENST00000556285 BCL2L10Q9HD36 194 aa11.53□□□□□ -0.56
TGFB3-204ENST00000556285 OBP2BQ9NPH6 170 aa11.53□□□□□ -0.56
TGFB3-204ENST00000556285 TMEM160Q9NX00 188 aa11.53□□□□□ -0.56
TGFB3-204ENST00000556285 SLAMF8Q9P0V8 285 aa11.53□□□□□ -0.56
TGFB3-204ENST00000556285 A0A096LPI6 279 aa11.52□□□□□ -0.57
TGFB3-204ENST00000556285 A0A1B0GWA3 101 aa11.52□□□□□ -0.57
TGFB3-204ENST00000556285 SLCO1B7G3V0H7 640 aa11.52□□□□□ -0.57
TGFB3-204ENST00000556285 M0R082 166 aa11.52□□□□□ -0.57
TGFB3-204ENST00000556285 TPST1O60507 370 aa11.52□□□□□ -0.57
TGFB3-204ENST00000556285 HPRP00739 348 aa11.52□□□□□ -0.57
TGFB3-204ENST00000556285 BMP2P12643 396 aa11.52□□□□□ -0.57
TGFB3-204ENST00000556285 MAGOHP61326 146 aaKnown RBP11.52□□□□□ -0.57
TGFB3-204ENST00000556285 SNRPD2P62316 118 aaKnown RBP11.52□□□□□ -0.57
TGFB3-204ENST00000556285 C1QTNF12Q5T7M4 302 aa11.52□□□□□ -0.57
TGFB3-204ENST00000556285 MIER2Q8N344 545 aa11.52□□□□□ -0.57
TGFB3-204ENST00000556285 NFKBIDQ8NI38 313 aa11.52□□□□□ -0.57
TGFB3-204ENST00000556285 ZNF417Q8TAU3 575 aa11.52□□□□□ -0.57
TGFB3-204ENST00000556285 MAGEE2Q8TD90 523 aaPredicted RBP11.52□□□□□ -0.57
TGFB3-204ENST00000556285 OXGR1Q96P68 337 aa11.52□□□□□ -0.57
TGFB3-204ENST00000556285 ZNF587Q96SQ5 575 aaPredicted RBP11.52□□□□□ -0.57
TGFB3-204ENST00000556285 WFDC6Q9BQY6 131 aa11.52□□□□□ -0.57
TGFB3-204ENST00000556285 PIMREGQ9BSJ6 248 aa11.52□□□□□ -0.57
TGFB3-204ENST00000556285 SHARPINQ9H0F6 387 aa11.52□□□□□ -0.57
TGFB3-204ENST00000556285 PLK3Q9H4B4 646 aa11.52□□□□□ -0.57
TGFB3-204ENST00000556285 GPR35Q9HC97 309 aa11.52□□□□□ -0.57
TGFB3-204ENST00000556285 PRDM4Q9UKN5 801 aa11.52□□□□□ -0.57
TGFB3-204ENST00000556285 IFT52Q9Y366 437 aa11.52□□□□□ -0.57
TGFB3-204ENST00000556285 FKBP7Q9Y680 259 aa11.52□□□□□ -0.57
TGFB3-204ENST00000556285 LOC100289279A0A1B0GTE1 492 aa11.51□□□□□ -0.57
TGFB3-204ENST00000556285 TMEM129A0AVI4 362 aa11.51□□□□□ -0.57
TGFB3-204ENST00000556285 LRP5LA4QPB2 252 aa11.51□□□□□ -0.57
TGFB3-204ENST00000556285 B9A039 149 aa11.51□□□□□ -0.57
TGFB3-204ENST00000556285 RPL36A-HNRNPH2H7BZ11 118 aa11.51□□□□□ -0.57
TGFB3-204ENST00000556285 FZD7O75084 574 aa11.51□□□□□ -0.57
TGFB3-204ENST00000556285 SLC43A1O75387 559 aa11.51□□□□□ -0.57
TGFB3-204ENST00000556285 IGKV3-15P01624 115 aa11.51□□□□□ -0.57
TGFB3-204ENST00000556285 IGFBP1P08833 259 aaPredicted RBP11.51□□□□□ -0.57
TGFB3-204ENST00000556285 HLA-DOBP13765 273 aa11.51□□□□□ -0.57
TGFB3-204ENST00000556285 APEHP13798 732 aaKnown RBP11.51□□□□□ -0.57
TGFB3-204ENST00000556285 ZNF43P17038 809 aa11.51□□□□□ -0.57
TGFB3-204ENST00000556285 GRPRP30550 384 aa11.51□□□□□ -0.57
TGFB3-204ENST00000556285 THBS4P35443 961 aa11.51□□□□□ -0.57
TGFB3-204ENST00000556285 GZMKP49863 264 aa11.51□□□□□ -0.57
TGFB3-204ENST00000556285 IDH3GP51553 393 aaPredicted RBP11.51□□□□□ -0.57
TGFB3-204ENST00000556285 EFNB3Q15768 340 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms