RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 MTRF1LQ9UGC7 380 aaKnown RBP1.87□□□□□ -2.11
SCFD1-218ENST00000556256 ZNF639Q9UID6 485 aa1.87□□□□□ -2.11
SCFD1-218ENST00000556256 PRG3Q9Y2Y8 225 aaPredicted RBP1.87□□□□□ -2.11
SCFD1-218ENST00000556256 FRMPD3Q5JV73 1810 aa1.87□□□□□ -2.11
SCFD1-218ENST00000556256 PLEKHH1Q9ULM0 1364 aa1.86□□□□□ -2.11
SCFD1-218ENST00000556256 NSG1A0A0A6YYJ2 146 aa1.86□□□□□ -2.11
SCFD1-218ENST00000556256 A0A1W2PPV9 198 aa1.86□□□□□ -2.11
SCFD1-218ENST00000556256 OR52A4PA6NMU1 304 aa1.86□□□□□ -2.11
SCFD1-218ENST00000556256 AGPAT2O15120 278 aa1.86□□□□□ -2.11
SCFD1-218ENST00000556256 OXSR1O95747 527 aaPredicted RBP1.86□□□□□ -2.11
SCFD1-218ENST00000556256 GAPDHP04406 335 aaKnown RBP1.86□□□□□ -2.11
SCFD1-218ENST00000556256 KLK3P07288 261 aaPredicted RBP1.86□□□□□ -2.11
SCFD1-218ENST00000556256 ICAM2P13598 275 aa1.86□□□□□ -2.11
SCFD1-218ENST00000556256 RCC1P18754 421 aaPredicted RBP1.86□□□□□ -2.11
SCFD1-218ENST00000556256 CMA1P23946 247 aa1.86□□□□□ -2.11
SCFD1-218ENST00000556256 GLP1RP43220 463 aa1.86□□□□□ -2.11
SCFD1-218ENST00000556256 TAS2R19P59542 299 aa1.86□□□□□ -2.11
SCFD1-218ENST00000556256 RPL23AP62750 156 aaKnown RBP1.86□□□□□ -2.11
SCFD1-218ENST00000556256 OR5I1Q13606 314 aa1.86□□□□□ -2.11
SCFD1-218ENST00000556256 ARFRP1Q13795 201 aa1.86□□□□□ -2.11
SCFD1-218ENST00000556256 ATP6AP1Q15904 470 aa1.86□□□□□ -2.11
SCFD1-218ENST00000556256 ZNF77Q15935 545 aa1.86□□□□□ -2.11
SCFD1-218ENST00000556256 MAJINQ3KP22 176 aa1.86□□□□□ -2.11
SCFD1-218ENST00000556256 C6orf226Q5I0X4 101 aa1.86□□□□□ -2.11
SCFD1-218ENST00000556256 C1orf94Q6P1W5 598 aa1.86□□□□□ -2.11
SCFD1-218ENST00000556256 HSDL2Q6YN16 418 aa1.86□□□□□ -2.11
SCFD1-218ENST00000556256 COX15Q7KZN9 410 aa1.86□□□□□ -2.11
SCFD1-218ENST00000556256 H2BFWTQ7Z2G1 175 aa1.86□□□□□ -2.11
SCFD1-218ENST00000556256 SLC26A11Q86WA9 606 aa1.86□□□□□ -2.11
SCFD1-218ENST00000556256 CCDC65Q8IXS2 484 aa1.86□□□□□ -2.11
SCFD1-218ENST00000556256 PNKDQ8N490 385 aa1.86□□□□□ -2.11
SCFD1-218ENST00000556256 ZNF561Q8N587 486 aa1.86□□□□□ -2.11
SCFD1-218ENST00000556256 OR6C4Q8NGE1 309 aa1.86□□□□□ -2.11
SCFD1-218ENST00000556256 OR1L4Q8NGR5 311 aa1.86□□□□□ -2.11
SCFD1-218ENST00000556256 ACOT11Q8WXI4 607 aaPredicted RBP1.86□□□□□ -2.11
SCFD1-218ENST00000556256 ARPC1AQ92747 370 aa1.86□□□□□ -2.11
SCFD1-218ENST00000556256 CXorf40BQ96DE9 158 aa1.86□□□□□ -2.11
SCFD1-218ENST00000556256 FCRL1Q96LA6 429 aa1.86□□□□□ -2.11
SCFD1-218ENST00000556256 MBOAT4Q96T53 435 aa1.86□□□□□ -2.11
SCFD1-218ENST00000556256 TMEM246Q9BRR3 403 aa1.86□□□□□ -2.11
SCFD1-218ENST00000556256 CHRDL1Q9BU40 450 aa1.86□□□□□ -2.11
SCFD1-218ENST00000556256 TRIM62Q9BVG3 475 aa1.86□□□□□ -2.11
SCFD1-218ENST00000556256 RNF167Q9H6Y7 350 aa1.86□□□□□ -2.11
SCFD1-218ENST00000556256 NANOGQ9H9S0 305 aa1.86□□□□□ -2.11
SCFD1-218ENST00000556256 LY9Q9HBG7 655 aa1.86□□□□□ -2.11
SCFD1-218ENST00000556256 SGK2Q9HBY8 427 aa1.86□□□□□ -2.11
SCFD1-218ENST00000556256 POLE4Q9NR33 117 aa1.86□□□□□ -2.11
SCFD1-218ENST00000556256 CCL28Q9NRJ3 127 aa1.86□□□□□ -2.11
SCFD1-218ENST00000556256 QPCTLQ9NXS2 382 aa1.86□□□□□ -2.11
SCFD1-218ENST00000556256 HOXC10Q9NYD6 342 aa1.86□□□□□ -2.11
SCFD1-218ENST00000556256 SEC14L3Q9UDX4 400 aa1.86□□□□□ -2.11
SCFD1-218ENST00000556256 KLK12Q9UKR0 248 aa1.86□□□□□ -2.11
SCFD1-218ENST00000556256 TP53TG5Q9Y2B4 290 aa1.86□□□□□ -2.11
SCFD1-218ENST00000556256 A0A0U1RQS6 177 aa1.85□□□□□ -2.11
SCFD1-218ENST00000556256 PCP4L1A6NKN8 68 aa1.85□□□□□ -2.11
SCFD1-218ENST00000556256 OR5B21A6NL26 309 aa1.85□□□□□ -2.11
SCFD1-218ENST00000556256 HIP1O00291 1037 aa1.85□□□□□ -2.11
SCFD1-218ENST00000556256 FOXE1O00358 373 aaPredicted RBP1.85□□□□□ -2.11
SCFD1-218ENST00000556256 B4GALT2O60909 372 aa1.85□□□□□ -2.11
SCFD1-218ENST00000556256 MOSP00540 346 aa1.85□□□□□ -2.11
SCFD1-218ENST00000556256 INSP01308 110 aa1.85□□□□□ -2.11
SCFD1-218ENST00000556256 IGHV4-34P06331 123 aa1.85□□□□□ -2.11
SCFD1-218ENST00000556256 TDGF1P13385 188 aa1.85□□□□□ -2.11
SCFD1-218ENST00000556256 TBPP20226 339 aa1.85□□□□□ -2.11
SCFD1-218ENST00000556256 NUDT1P36639 197 aa1.85□□□□□ -2.11
SCFD1-218ENST00000556256 TAGLN2P37802 199 aaKnown RBP1.85□□□□□ -2.11
SCFD1-218ENST00000556256 VHLP40337 213 aa1.85□□□□□ -2.11
SCFD1-218ENST00000556256 VDAC2P45880 294 aaPredicted RBP1.85□□□□□ -2.11
SCFD1-218ENST00000556256 GSSP48637 474 aa1.85□□□□□ -2.11
SCFD1-218ENST00000556256 ARRB1P49407 418 aaPredicted RBP1.85□□□□□ -2.11
SCFD1-218ENST00000556256 GPM6AP51674 278 aa1.85□□□□□ -2.11
SCFD1-218ENST00000556256 TDGF1P3P51864 188 aa1.85□□□□□ -2.11
SCFD1-218ENST00000556256 CDH4P55283 916 aa1.85□□□□□ -2.11
SCFD1-218ENST00000556256 PRPS1P60891 318 aa1.85□□□□□ -2.11
SCFD1-218ENST00000556256 OGDHQ02218 1023 aa1.85□□□□□ -2.11
SCFD1-218ENST00000556256 PLD1Q13393 1074 aa1.85□□□□□ -2.11
SCFD1-218ENST00000556256 GNMTQ14749 295 aa1.85□□□□□ -2.11
SCFD1-218ENST00000556256 NRF1Q16656 503 aa1.85□□□□□ -2.11
SCFD1-218ENST00000556256 PAGE3Q5JUK9 113 aa1.85□□□□□ -2.11
SCFD1-218ENST00000556256 CTSL3PQ5NE16 218 aa1.85□□□□□ -2.11
SCFD1-218ENST00000556256 MARCH8Q5T0T0 291 aa1.85□□□□□ -2.11
SCFD1-218ENST00000556256 OR2A2Q6IF42 318 aa1.85□□□□□ -2.11
SCFD1-218ENST00000556256 UQCC3Q6UW78 93 aa1.85□□□□□ -2.11
SCFD1-218ENST00000556256 ZNF546Q86UE3 836 aa1.85□□□□□ -2.11
SCFD1-218ENST00000556256 MFSD6LQ8IWD5 586 aa1.85□□□□□ -2.11
SCFD1-218ENST00000556256 RNF175Q8N4F7 328 aa1.85□□□□□ -2.11
SCFD1-218ENST00000556256 FAM71E2Q8N5Q1 922 aa1.85□□□□□ -2.11
SCFD1-218ENST00000556256 ZNF433Q8N7K0 673 aaPredicted RBP1.85□□□□□ -2.11
SCFD1-218ENST00000556256 NPBQ8NG41 125 aa1.85□□□□□ -2.11
SCFD1-218ENST00000556256 OR13C2Q8NGS9 318 aa1.85□□□□□ -2.11
SCFD1-218ENST00000556256 OR9G1Q8NH87 305 aa1.85□□□□□ -2.11
SCFD1-218ENST00000556256 FAM151AQ8WW52 585 aa1.85□□□□□ -2.11
SCFD1-218ENST00000556256 SHC3Q92529 594 aa1.85□□□□□ -2.11
SCFD1-218ENST00000556256 RDH5Q92781 318 aa1.85□□□□□ -2.11
SCFD1-218ENST00000556256 C12orf42Q96LP6 360 aa1.85□□□□□ -2.11
SCFD1-218ENST00000556256 SLC39A3Q9BRY0 314 aa1.85□□□□□ -2.11
SCFD1-218ENST00000556256 RIOK2Q9BVS4 552 aaKnown RBP1.85□□□□□ -2.11
SCFD1-218ENST00000556256 ROPN1BQ9BZX4 212 aaPredicted RBP1.85□□□□□ -2.11
SCFD1-218ENST00000556256 SRMSQ9H3Y6 488 aa1.85□□□□□ -2.11
SCFD1-218ENST00000556256 ANKRD19PQ9H560 264 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms