RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 SEMA4FO95754 770 aa6.4□□□□□ -1.39
TDP1-213ENST00000555880 IFNA7P01567 189 aa6.4□□□□□ -1.39
TDP1-213ENST00000555880 IFNA16P05015 189 aa6.4□□□□□ -1.39
TDP1-213ENST00000555880 TPOP07202 933 aa6.4□□□□□ -1.39
TDP1-213ENST00000555880 RAB40ALP0C0E4 278 aa6.4□□□□□ -1.39
TDP1-213ENST00000555880 C4BPBP20851 252 aa6.4□□□□□ -1.39
TDP1-213ENST00000555880 DRD1P21728 446 aa6.4□□□□□ -1.39
TDP1-213ENST00000555880 PGDP52209 483 aa6.4□□□□□ -1.39
TDP1-213ENST00000555880 ARPC4P59998 168 aa6.4□□□□□ -1.39
TDP1-213ENST00000555880 RPS11P62280 158 aaKnown RBP eCLIP6.4□□□□□ -1.39
TDP1-213ENST00000555880 MRPS21P82921 87 aaKnown RBP6.4□□□□□ -1.39
TDP1-213ENST00000555880 HHEXQ03014 270 aa6.4□□□□□ -1.39
TDP1-213ENST00000555880 FAM53BQ14153 422 aa6.4□□□□□ -1.39
TDP1-213ENST00000555880 NNATQ16517 81 aa6.4□□□□□ -1.39
TDP1-213ENST00000555880 DEFB110Q30KQ9 67 aa6.4□□□□□ -1.39
TDP1-213ENST00000555880 HES5Q5TA89 166 aa6.4□□□□□ -1.39
TDP1-213ENST00000555880 WBP2NLQ6ICG8 309 aa6.4□□□□□ -1.39
TDP1-213ENST00000555880 LEG1Q6P5S2 330 aa6.4□□□□□ -1.39
TDP1-213ENST00000555880 LRRN1Q6UXK5 716 aa6.4□□□□□ -1.39
TDP1-213ENST00000555880 UNQ9370/PRO34162Q6UXP9 181 aa6.4□□□□□ -1.39
TDP1-213ENST00000555880 ESPNLQ6ZVH7 1005 aa6.4□□□□□ -1.39
TDP1-213ENST00000555880 LSRQ86X29 649 aaPredicted RBP6.4□□□□□ -1.39
TDP1-213ENST00000555880 ZNF761Q86XN6 746 aaPredicted RBP6.4□□□□□ -1.39
TDP1-213ENST00000555880 MCATQ8IVS2 390 aaKnown RBP6.4□□□□□ -1.39
TDP1-213ENST00000555880 IZUMO1Q8IYV9 350 aa6.4□□□□□ -1.39
TDP1-213ENST00000555880 CMTM4Q8IZR5 234 aa6.4□□□□□ -1.39
TDP1-213ENST00000555880 C19orf47Q8N9M1 422 aaKnown RBP6.4□□□□□ -1.39
TDP1-213ENST00000555880 NPEPL1Q8NDH3 523 aa6.4□□□□□ -1.39
TDP1-213ENST00000555880 OR13H1Q8NG92 308 aa6.4□□□□□ -1.39
TDP1-213ENST00000555880 OR51Q1Q8NH59 317 aa6.4□□□□□ -1.39
TDP1-213ENST00000555880 RAB40AQ8WXH6 277 aa6.4□□□□□ -1.39
TDP1-213ENST00000555880 HGDQ93099 445 aa6.4□□□□□ -1.39
TDP1-213ENST00000555880 RASD2Q96D21 266 aa6.4□□□□□ -1.39
TDP1-213ENST00000555880 SPACA7Q96KW9 195 aa6.4□□□□□ -1.39
TDP1-213ENST00000555880 DERL3Q96Q80 235 aa6.4□□□□□ -1.39
TDP1-213ENST00000555880 ALG12Q9BV10 488 aa6.4□□□□□ -1.39
TDP1-213ENST00000555880 SLC25A18Q9H1K4 315 aa6.4□□□□□ -1.39
TDP1-213ENST00000555880 TCF7L1Q9HCS4 588 aa6.4□□□□□ -1.39
TDP1-213ENST00000555880 ZFP64Q9NPA5 681 aa6.4□□□□□ -1.39
TDP1-213ENST00000555880 CD93Q9NPY3 652 aa6.4□□□□□ -1.39
TDP1-213ENST00000555880 PRTFDC1Q9NRG1 225 aa6.4□□□□□ -1.39
TDP1-213ENST00000555880 SCP2D1Q9UJQ7 156 aa6.4□□□□□ -1.39
TDP1-213ENST00000555880 POMT2Q9UKY4 750 aa6.4□□□□□ -1.39
TDP1-213ENST00000555880 MOKQ9UQ07 419 aa6.4□□□□□ -1.39
TDP1-213ENST00000555880 SLC6A5Q9Y345 797 aa6.4□□□□□ -1.39
TDP1-213ENST00000555880 PCDHGA9Q9Y5G4 932 aaKnown RBP6.4□□□□□ -1.39
TDP1-213ENST00000555880 V9GY05 133 aa6.4□□□□□ -1.39
TDP1-213ENST00000555880 MPDZO75970 2070 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.39□□□□□ -1.39
TDP1-213ENST00000555880 OR6C68A6NDL8 312 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 ACOD1A6NK06 481 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 BLOC1S5-TXNDC5H3BN57 136 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 ZNF593O00488 134 aaPredicted RBP6.39□□□□□ -1.39
TDP1-213ENST00000555880 GPR171O14626 319 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 KHNYNO15037 678 aaKnown RBP6.39□□□□□ -1.39
TDP1-213ENST00000555880 NDUFB5O43674 189 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 SRPX2O60687 465 aaPredicted RBP6.39□□□□□ -1.39
TDP1-213ENST00000555880 CDC123O75794 336 aaPredicted RBP6.39□□□□□ -1.39
TDP1-213ENST00000555880 RAF1P04049 648 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 WNT1P04628 370 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 SULT1A3P0DMM9 295 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 SULT1A4P0DMN0 295 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 VSIG8P0DPA2 414 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 CALCBP10092 127 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 ST6GAL1P15907 406 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 CXCL3P19876 107 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 PSMB1P20618 241 aaKnown RBP6.39□□□□□ -1.39
TDP1-213ENST00000555880 DNASE1P24855 282 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 CCR4P51679 360 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 CCR9P51686 369 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 P2RX3P56373 397 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 PPP1CAP62136 330 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 RPS4XP62701 263 aaKnown RBP6.39□□□□□ -1.39
TDP1-213ENST00000555880 ST3GAL2Q16842 350 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.39□□□□□ -1.39
TDP1-213ENST00000555880 NDUFAF6Q330K2 333 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 ESCO2Q56NI9 601 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 TMEM69Q5SWH9 247 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 COL13A1Q5TAT6 717 aaPredicted RBP6.39□□□□□ -1.39
TDP1-213ENST00000555880 METTL11BQ5VVY1 283 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 TEX261Q6UWH6 196 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 NPSR1Q6W5P4 371 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 SLC16A9Q7RTY1 509 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 CCDC28AQ8IWP9 274 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 SHISA5Q8N114 240 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 OR8H3Q8N146 312 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 BCORP1Q8N888 145 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 OR6C4Q8NGE1 309 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 OR5AK2Q8NH90 309 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 MOSPD2Q8NHP6 518 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 C1orf216Q8TAB5 229 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 OIT3Q8WWZ8 545 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 C3orf49Q96BT1 292 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 NXPE2Q96DL1 559 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 MED30Q96HR3 178 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 RADILQ96JH8 1075 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 GPX7Q96SL4 187 aaPredicted RBP6.39□□□□□ -1.39
TDP1-213ENST00000555880 PELOQ9BRX2 385 aaKnown RBP6.39□□□□□ -1.39
TDP1-213ENST00000555880 NMNAT2Q9BZQ4 307 aa6.39□□□□□ -1.39
TDP1-213ENST00000555880 OR10A5Q9H207 317 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms