RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-218ENST00000555628 EXOSC3Q9NQT5 275 aaKnown RBP7.76□□□□□ -1.17
PRKCH-218ENST00000555628 TMEM45AQ9NWC5 275 aa7.76□□□□□ -1.17
PRKCH-218ENST00000555628 C1orf109Q9NX04 203 aa7.76□□□□□ -1.17
PRKCH-218ENST00000555628 SH3BP4Q9P0V3 963 aa7.76□□□□□ -1.17
PRKCH-218ENST00000555628 OSGIN1Q9UJX0 560 aa7.76□□□□□ -1.17
PRKCH-218ENST00000555628 POLR3KQ9Y2Y1 108 aaPredicted RBP7.76□□□□□ -1.17
PRKCH-218ENST00000555628 OR6C65A6NJZ3 312 aa7.75□□□□□ -1.17
PRKCH-218ENST00000555628 ZNF587BE7ETH6 402 aa7.75□□□□□ -1.17
PRKCH-218ENST00000555628 RPL36A-HNRNPH2H7BZ11 118 aa7.75□□□□□ -1.17
PRKCH-218ENST00000555628 CLDN34H7C241 214 aa7.75□□□□□ -1.17
PRKCH-218ENST00000555628 AP3D1O14617 1153 aa7.75□□□□□ -1.17
PRKCH-218ENST00000555628 LSM1O15116 133 aaKnown RBP7.75□□□□□ -1.17
PRKCH-218ENST00000555628 SCAMP2O15127 329 aaKnown RBP7.75□□□□□ -1.17
PRKCH-218ENST00000555628 PAX4O43316 350 aa7.75□□□□□ -1.17
PRKCH-218ENST00000555628 FZD7O75084 574 aa7.75□□□□□ -1.17
PRKCH-218ENST00000555628 SEC22BO75396 215 aa7.75□□□□□ -1.17
PRKCH-218ENST00000555628 ZNF432O94892 652 aa7.75□□□□□ -1.17
PRKCH-218ENST00000555628 IGHV2-5P01817 119 aa7.75□□□□□ -1.17
PRKCH-218ENST00000555628 INHBAP08476 426 aa7.75□□□□□ -1.17
PRKCH-218ENST00000555628 NUDT17P0C025 328 aa7.75□□□□□ -1.17
PRKCH-218ENST00000555628 LAMP1P11279 417 aa7.75□□□□□ -1.17
PRKCH-218ENST00000555628 BCKDHAP12694 445 aa7.75□□□□□ -1.17
PRKCH-218ENST00000555628 TAC1P20366 129 aa7.75□□□□□ -1.17
PRKCH-218ENST00000555628 NR4A1P22736 598 aa7.75□□□□□ -1.17
PRKCH-218ENST00000555628 GCH1P30793 250 aa7.75□□□□□ -1.17
PRKCH-218ENST00000555628 CCT3P49368 545 aaKnown RBP7.75□□□□□ -1.17
PRKCH-218ENST00000555628 SEC24CP53992 1094 aa7.75□□□□□ -1.17
PRKCH-218ENST00000555628 IL13RA1P78552 427 aa7.75□□□□□ -1.17
PRKCH-218ENST00000555628 MYBPC1Q00872 1141 aa7.75□□□□□ -1.17
PRKCH-218ENST00000555628 C2orf54Q08AI8 447 aa7.75□□□□□ -1.17
PRKCH-218ENST00000555628 IMPG1Q17R60 797 aa7.75□□□□□ -1.17
PRKCH-218ENST00000555628 KLF17Q5JT82 389 aaPredicted RBP7.75□□□□□ -1.17
PRKCH-218ENST00000555628 ACSM5Q6NUN0 579 aa7.75□□□□□ -1.17
PRKCH-218ENST00000555628 EIF3MQ7L2H7 374 aaKnown RBP7.75□□□□□ -1.17
PRKCH-218ENST00000555628 AAED1Q7RTV5 226 aa7.75□□□□□ -1.17
PRKCH-218ENST00000555628 LCA5Q86VQ0 697 aa7.75□□□□□ -1.17
PRKCH-218ENST00000555628 LRP11Q86VZ4 500 aa7.75□□□□□ -1.17
PRKCH-218ENST00000555628 EPHX4Q8IUS5 362 aa7.75□□□□□ -1.17
PRKCH-218ENST00000555628 SIGLECL1Q8N7X8 197 aa7.75□□□□□ -1.17
PRKCH-218ENST00000555628 TMEM99Q8N816 258 aa7.75□□□□□ -1.17
PRKCH-218ENST00000555628 OR7A2PQ8NGA2 310 aa7.75□□□□□ -1.17
PRKCH-218ENST00000555628 NANPQ8TBE9 248 aa7.75□□□□□ -1.17
PRKCH-218ENST00000555628 ZG16BQ96DA0 208 aa7.75□□□□□ -1.17
PRKCH-218ENST00000555628 PKP2Q99959 881 aa7.75□□□□□ -1.17
PRKCH-218ENST00000555628 LINC00470Q9BZP3 86 aa7.75□□□□□ -1.17
PRKCH-218ENST00000555628 ZMAT3Q9HA38 289 aaKnown RBP7.75□□□□□ -1.17
PRKCH-218ENST00000555628 SLC52A3Q9NQ40 469 aa7.75□□□□□ -1.17
PRKCH-218ENST00000555628 RRAGDQ9NQL2 400 aaPredicted RBP7.75□□□□□ -1.17
PRKCH-218ENST00000555628 DDX28Q9NUL7 540 aaKnown RBP7.75□□□□□ -1.17
PRKCH-218ENST00000555628 B3GNT2Q9NY97 397 aa7.75□□□□□ -1.17
PRKCH-218ENST00000555628 PDP1Q9P0J1 537 aaPredicted RBP7.75□□□□□ -1.17
PRKCH-218ENST00000555628 REV1Q9UBZ9 1251 aa7.75□□□□□ -1.17
PRKCH-218ENST00000555628 ZDHHC2Q9UIJ5 367 aa7.75□□□□□ -1.17
PRKCH-218ENST00000555628 MKLN1Q9UL63 735 aa7.75□□□□□ -1.17
PRKCH-218ENST00000555628 PCDHGB4Q9UN71 923 aa7.75□□□□□ -1.17
PRKCH-218ENST00000555628 RNF114Q9Y508 228 aa7.75□□□□□ -1.17
PRKCH-218ENST00000555628 MMP24Q9Y5R2 645 aa7.75□□□□□ -1.17
PRKCH-218ENST00000555628 TMED7-TICAM2A0A0A6YYA0 188 aa7.74□□□□□ -1.17
PRKCH-218ENST00000555628 CLDN24A6NM45 220 aa7.74□□□□□ -1.17
PRKCH-218ENST00000555628 H3BQF6 201 aa7.74□□□□□ -1.17
PRKCH-218ENST00000555628 FAAHO00519 579 aa7.74□□□□□ -1.17
PRKCH-218ENST00000555628 STX11O75558 287 aa7.74□□□□□ -1.17
PRKCH-218ENST00000555628 CYP7B1O75881 506 aa7.74□□□□□ -1.17
PRKCH-218ENST00000555628 AKR7A3O95154 331 aa7.74□□□□□ -1.17
PRKCH-218ENST00000555628 MPZL1O95297 269 aa7.74□□□□□ -1.17
PRKCH-218ENST00000555628 C6orf47O95873 294 aa7.74□□□□□ -1.17
PRKCH-218ENST00000555628 BCL10O95999 233 aa7.74□□□□□ -1.17
PRKCH-218ENST00000555628 KRT16P08779 473 aa7.74□□□□□ -1.17
PRKCH-218ENST00000555628 UROSP10746 265 aa7.74□□□□□ -1.17
PRKCH-218ENST00000555628 ZNF35P13682 527 aa7.74□□□□□ -1.17
PRKCH-218ENST00000555628 MDKP21741 143 aaPredicted RBP7.74□□□□□ -1.17
PRKCH-218ENST00000555628 PAFAH1B1P43034 410 aa7.74□□□□□ -1.17
PRKCH-218ENST00000555628 ALDH3B1P43353 468 aa7.74□□□□□ -1.17
PRKCH-218ENST00000555628 SH3BGRP55822 239 aaPredicted RBP7.74□□□□□ -1.17
PRKCH-218ENST00000555628 UBE2NP61088 152 aaKnown RBP7.74□□□□□ -1.17
PRKCH-218ENST00000555628 RPL38P63173 70 aaKnown RBP7.74□□□□□ -1.17
PRKCH-218ENST00000555628 SRSF4Q08170 494 aaKnown RBP7.74□□□□□ -1.17
PRKCH-218ENST00000555628 TP53BP2Q13625 1128 aa7.74□□□□□ -1.17
PRKCH-218ENST00000555628 DAG1Q14118 895 aa7.74□□□□□ -1.17
PRKCH-218ENST00000555628 MAD2L1BPQ15013 274 aaPredicted RBP7.74□□□□□ -1.17
PRKCH-218ENST00000555628 GPR68Q15743 365 aa7.74□□□□□ -1.17
PRKCH-218ENST00000555628 ARHGAP11BQ3KRB8 267 aa7.74□□□□□ -1.17
PRKCH-218ENST00000555628 FBLN7Q53RD9 439 aa7.74□□□□□ -1.17
PRKCH-218ENST00000555628 TEX35Q5T0J7 233 aa7.74□□□□□ -1.17
PRKCH-218ENST00000555628 OTUD3Q5T2D3 398 aaPredicted RBP7.74□□□□□ -1.17
PRKCH-218ENST00000555628 LIPMQ5VYY2 423 aa7.74□□□□□ -1.17
PRKCH-218ENST00000555628 CLEC6AQ6EIG7 209 aa7.74□□□□□ -1.17
PRKCH-218ENST00000555628 TYW3Q6IPR3 259 aaKnown RBP7.74□□□□□ -1.17
PRKCH-218ENST00000555628 KRT80Q6KB66 452 aa7.74□□□□□ -1.17
PRKCH-218ENST00000555628 FRRS1Q6ZNA5 592 aa7.74□□□□□ -1.17
PRKCH-218ENST00000555628 CREB3L2Q70SY1 520 aa7.74□□□□□ -1.17
PRKCH-218ENST00000555628 ABHD12BQ7Z5M8 362 aaPredicted RBP7.74□□□□□ -1.17
PRKCH-218ENST00000555628 MDP1Q86V88 176 aa7.74□□□□□ -1.17
PRKCH-218ENST00000555628 DEFB108BQ8NET1 73 aa7.74□□□□□ -1.17
PRKCH-218ENST00000555628 MIPOL1Q8TD10 442 aa7.74□□□□□ -1.17
PRKCH-218ENST00000555628 OR5P2Q8WZ92 322 aa7.74□□□□□ -1.17
PRKCH-218ENST00000555628 COQ8BQ96D53 544 aa7.74□□□□□ -1.17
PRKCH-218ENST00000555628 DUX5Q96PT3 197 aa7.74□□□□□ -1.17
PRKCH-218ENST00000555628 NAPGQ99747 312 aaPredicted RBP7.74□□□□□ -1.17
PRKCH-218ENST00000555628 KRTAP4-12Q9BQ66 201 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms