RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 DCSTAMPQ9H295 470 aa8.91□□□□□ -0.98
PSEN1-213ENST00000555386 UBQLN3Q9H347 655 aa8.91□□□□□ -0.98
PSEN1-213ENST00000555386 ANKRD19PQ9H560 264 aa8.91□□□□□ -0.98
PSEN1-213ENST00000555386 POLE3Q9NRF9 147 aa8.91□□□□□ -0.98
PSEN1-213ENST00000555386 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.91□□□□□ -0.98
PSEN1-213ENST00000555386 CCDC59Q9P031 241 aaKnown RBP8.91□□□□□ -0.98
PSEN1-213ENST00000555386 SPRR3Q9UBC9 169 aa8.91□□□□□ -0.98
PSEN1-213ENST00000555386 RHCGQ9UBD6 479 aa8.91□□□□□ -0.98
PSEN1-213ENST00000555386 TINAGQ9UJW2 476 aa8.91□□□□□ -0.98
PSEN1-213ENST00000555386 A4GNTQ9UNA3 340 aa8.91□□□□□ -0.98
PSEN1-213ENST00000555386 ZNF443Q9Y2A4 671 aaPredicted RBP8.91□□□□□ -0.98
PSEN1-213ENST00000555386 RPL36Q9Y3U8 105 aaKnown RBP8.91□□□□□ -0.98
PSEN1-213ENST00000555386 CORINQ9Y5Q5 1042 aa8.91□□□□□ -0.98
PSEN1-213ENST00000555386 FLNCQ14315 2725 aa8.91□□□□□ -0.98
PSEN1-213ENST00000555386 SPTBN1Q01082 2364 aaKnown RBP8.91□□□□□ -0.98
PSEN1-213ENST00000555386 GCN1Q92616 2671 aaKnown RBP8.9□□□□□ -0.98
PSEN1-213ENST00000555386 AGAP5A6NIR3 686 aa8.9□□□□□ -0.98
PSEN1-213ENST00000555386 H3BML4 177 aa8.9□□□□□ -0.98
PSEN1-213ENST00000555386 J3QRK9 145 aa8.9□□□□□ -0.98
PSEN1-213ENST00000555386 FRS3O43559 492 aa8.9□□□□□ -0.98
PSEN1-213ENST00000555386 ZIC3O60481 467 aa8.9□□□□□ -0.98
PSEN1-213ENST00000555386 SLC19A2O60779 497 aa8.9□□□□□ -0.98
PSEN1-213ENST00000555386 SEMA7AO75326 666 aa8.9□□□□□ -0.98
PSEN1-213ENST00000555386 DBIP07108 87 aaKnown RBP8.9□□□□□ -0.98
PSEN1-213ENST00000555386 OCM2P0CE71 109 aa8.9□□□□□ -0.98
PSEN1-213ENST00000555386 OCMP0CE72 109 aaPredicted RBP8.9□□□□□ -0.98
PSEN1-213ENST00000555386 GKN3PP0CG01 181 aa8.9□□□□□ -0.98
PSEN1-213ENST00000555386 ENDOUP21128 410 aaKnown RBP8.9□□□□□ -0.98
PSEN1-213ENST00000555386 CD40LGP29965 261 aa8.9□□□□□ -0.98
PSEN1-213ENST00000555386 SRD5A2P31213 254 aa8.9□□□□□ -0.98
PSEN1-213ENST00000555386 IFNA8P32881 189 aa8.9□□□□□ -0.98
PSEN1-213ENST00000555386 IDUAP35475 653 aa8.9□□□□□ -0.98
PSEN1-213ENST00000555386 IFNGR2P38484 337 aa8.9□□□□□ -0.98
PSEN1-213ENST00000555386 STARP49675 285 aa8.9□□□□□ -0.98
PSEN1-213ENST00000555386 RGS6P49758 472 aa8.9□□□□□ -0.98
PSEN1-213ENST00000555386 NUDT6P53370 316 aa8.9□□□□□ -0.98
PSEN1-213ENST00000555386 DSCR4P56555 118 aaPredicted RBP8.9□□□□□ -0.98
PSEN1-213ENST00000555386 FGFBP1Q14512 234 aa8.9□□□□□ -0.98
PSEN1-213ENST00000555386 LARS2Q15031 903 aaKnown RBP8.9□□□□□ -0.98
PSEN1-213ENST00000555386 SEC23BQ15437 767 aa8.9□□□□□ -0.98
PSEN1-213ENST00000555386 TOMM34Q15785 309 aaPredicted RBP8.9□□□□□ -0.98
PSEN1-213ENST00000555386 ARMCX4Q5H9R4 360 aa8.9□□□□□ -0.98
PSEN1-213ENST00000555386 ENTPD8Q5MY95 495 aa8.9□□□□□ -0.98
PSEN1-213ENST00000555386 MRPL2Q5T653 305 aaKnown RBP8.9□□□□□ -0.98
PSEN1-213ENST00000555386 C1orf94Q6P1W5 598 aa8.9□□□□□ -0.98
PSEN1-213ENST00000555386 ZNF585AQ6P3V2 769 aa8.9□□□□□ -0.98
PSEN1-213ENST00000555386 ARHGAP11AQ6P4F7 1023 aa8.9□□□□□ -0.98
PSEN1-213ENST00000555386 ZNF836Q6ZNA1 936 aa8.9□□□□□ -0.98
PSEN1-213ENST00000555386 CD163Q86VB7 1156 aa8.9□□□□□ -0.98
PSEN1-213ENST00000555386 MISPQ8IVT2 679 aa8.9□□□□□ -0.98
PSEN1-213ENST00000555386 UBQLNLQ8IYU4 475 aa8.9□□□□□ -0.98
PSEN1-213ENST00000555386 CENPSQ8N2Z9 138 aa8.9□□□□□ -0.98
PSEN1-213ENST00000555386 MFSD4AQ8N468 514 aa8.9□□□□□ -0.98
PSEN1-213ENST00000555386 FADS6Q8N9I5 356 aa8.9□□□□□ -0.98
PSEN1-213ENST00000555386 ZNF563Q8TA94 476 aa8.9□□□□□ -0.98
PSEN1-213ENST00000555386 VANGL1Q8TAA9 524 aaPredicted RBP8.9□□□□□ -0.98
PSEN1-213ENST00000555386 NEIL3Q8TAT5 605 aa8.9□□□□□ -0.98
PSEN1-213ENST00000555386 SLC7A13Q8TCU3 470 aa8.9□□□□□ -0.98
PSEN1-213ENST00000555386 ABTB1Q969K4 478 aaPredicted RBP8.9□□□□□ -0.98
PSEN1-213ENST00000555386 C1GALT1C1Q96EU7 318 aa8.9□□□□□ -0.98
PSEN1-213ENST00000555386 NPAS1Q99742 590 aa8.9□□□□□ -0.98
PSEN1-213ENST00000555386 RSPO3Q9BXY4 272 aaPredicted RBP8.9□□□□□ -0.98
PSEN1-213ENST00000555386 POLDIP3Q9BY77 421 aaKnown RBP8.9□□□□□ -0.98
PSEN1-213ENST00000555386 MROQ9BYG7 248 aa8.9□□□□□ -0.98
PSEN1-213ENST00000555386 NXF2Q9GZY0 626 aaKnown RBP8.9□□□□□ -0.98
PSEN1-213ENST00000555386 TMEM185BQ9H7F4 350 aa8.9□□□□□ -0.98
PSEN1-213ENST00000555386 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.9□□□□□ -0.98
PSEN1-213ENST00000555386 ZNF232Q9UNY5 417 aa8.9□□□□□ -0.98
PSEN1-213ENST00000555386 CAMK2AQ9UQM7 478 aa8.9□□□□□ -0.98
PSEN1-213ENST00000555386 PMF1-BGLAPU3KQ54 211 aa8.9□□□□□ -0.98
PSEN1-213ENST00000555386 ARHGAP21Q5T5U3 1957 aa8.9□□□□□ -0.99
PSEN1-213ENST00000555386 hCG_2014768A0A024R1R8 64 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 IRGMA1A4Y4 181 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 METTL15A6NJ78 407 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 PRRG2O14669 202 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 SEC14L5O43304 696 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 PTHP01270 115 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 HPNP05981 417 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 PEPDP12955 493 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 GADD45AP24522 165 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 POU1F1P28069 291 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 PRKAR1BP31321 381 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 P2RX1P51575 399 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 CASP6P55212 293 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 LSM3P62310 102 aaKnown RBP8.89□□□□□ -0.99
PSEN1-213ENST00000555386 HOXC5Q00444 222 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 ITGADQ13349 1161 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 ZNF404Q494X3 552 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 PODNL1Q6PEZ8 512 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 BRICD5Q6PL45 260 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 GDPGP1Q6ZNW5 385 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 FJX1Q86VR8 437 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 CLIP4Q8N3C7 705 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 FAM26EQ8N5C1 309 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 TOR1AIP2Q8NFQ8 470 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 OR4D11Q8NGI4 311 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 MCFD2Q8NI22 146 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 RPL3LQ92901 407 aaKnown RBP8.89□□□□□ -0.99
PSEN1-213ENST00000555386 NTNG2Q96CW9 530 aa8.89□□□□□ -0.99
PSEN1-213ENST00000555386 ARHGDIGQ99819 225 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms