RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 CIDEBQ9UHD4 219 aa4.22□□□□□ -1.73
VRK1-203ENST00000555067 GGA2Q9UJY4 613 aa4.22□□□□□ -1.73
VRK1-203ENST00000555067 FBXO7Q9Y3I1 522 aa4.22□□□□□ -1.73
VRK1-203ENST00000555067 USP16Q9Y5T5 823 aa4.22□□□□□ -1.73
VRK1-203ENST00000555067 GOLGA8QA0A0J9YX86 632 aa4.21□□□□□ -1.74
VRK1-203ENST00000555067 RAB19A4D1S5 217 aa4.21□□□□□ -1.74
VRK1-203ENST00000555067 SAGE2PA6NJ88 616 aa4.21□□□□□ -1.74
VRK1-203ENST00000555067 C15orf61A6NNL5 157 aa4.21□□□□□ -1.74
VRK1-203ENST00000555067 M0R3G1 203 aa4.21□□□□□ -1.74
VRK1-203ENST00000555067 ZNF749O43361 778 aa4.21□□□□□ -1.74
VRK1-203ENST00000555067 MAGEC1O60732 1142 aa4.21□□□□□ -1.74
VRK1-203ENST00000555067 NDUFS6O75380 124 aaKnown RBP4.21□□□□□ -1.74
VRK1-203ENST00000555067 UGT2B17O75795 530 aa4.21□□□□□ -1.74
VRK1-203ENST00000555067 CBR3O75828 277 aa4.21□□□□□ -1.74
VRK1-203ENST00000555067 OR7A10O76100 309 aa4.21□□□□□ -1.74
VRK1-203ENST00000555067 CCNB2O95067 398 aa4.21□□□□□ -1.74
VRK1-203ENST00000555067 LYPD3O95274 346 aa4.21□□□□□ -1.74
VRK1-203ENST00000555067 OXSR1O95747 527 aaPredicted RBP4.21□□□□□ -1.74
VRK1-203ENST00000555067 NUDT14O95848 222 aa4.21□□□□□ -1.74
VRK1-203ENST00000555067 FCGR3AP08637 254 aa4.21□□□□□ -1.74
VRK1-203ENST00000555067 FGF9P31371 208 aaPredicted RBP4.21□□□□□ -1.74
VRK1-203ENST00000555067 SPAM1P38567 509 aa4.21□□□□□ -1.74
VRK1-203ENST00000555067 NAA10P41227 235 aaPredicted RBP4.21□□□□□ -1.74
VRK1-203ENST00000555067 RGRP47804 291 aa4.21□□□□□ -1.74
VRK1-203ENST00000555067 CX3CR1P49238 355 aa4.21□□□□□ -1.74
VRK1-203ENST00000555067 MRPL19P49406 292 aaKnown RBP4.21□□□□□ -1.74
VRK1-203ENST00000555067 TMED10P49755 219 aaKnown RBP4.21□□□□□ -1.74
VRK1-203ENST00000555067 DAP3P51398 398 aaKnown RBP4.21□□□□□ -1.74
VRK1-203ENST00000555067 LCN2P80188 198 aa4.21□□□□□ -1.74
VRK1-203ENST00000555067 SCRN3Q0VDG4 424 aa4.21□□□□□ -1.74
VRK1-203ENST00000555067 GRB7Q14451 532 aa4.21□□□□□ -1.74
VRK1-203ENST00000555067 USF2Q15853 346 aaPredicted RBP4.21□□□□□ -1.74
VRK1-203ENST00000555067 LINC00242Q5T6M2 205 aa4.21□□□□□ -1.74
VRK1-203ENST00000555067 STUMQ69YW2 141 aa4.21□□□□□ -1.74
VRK1-203ENST00000555067 MBOAT1Q6ZNC8 495 aa4.21□□□□□ -1.74
VRK1-203ENST00000555067 CDC20BQ86Y33 519 aa4.21□□□□□ -1.74
VRK1-203ENST00000555067 RBM45Q8IUH3 476 aaKnown RBP4.21□□□□□ -1.74
VRK1-203ENST00000555067 NUDCD3Q8IVD9 361 aa4.21□□□□□ -1.74
VRK1-203ENST00000555067 LRRC8AQ8IWT6 810 aa4.21□□□□□ -1.74
VRK1-203ENST00000555067 RAB42Q8N4Z0 105 aa4.21□□□□□ -1.74
VRK1-203ENST00000555067 MS4A15Q8N5U1 240 aa4.21□□□□□ -1.74
VRK1-203ENST00000555067 GATSQ8NAP1 163 aa4.21□□□□□ -1.74
VRK1-203ENST00000555067 PRSS33Q8NF86 280 aa4.21□□□□□ -1.74
VRK1-203ENST00000555067 TRUB1Q8WWH5 349 aaKnown RBP4.21□□□□□ -1.74
VRK1-203ENST00000555067 IL1F10Q8WWZ1 152 aa4.21□□□□□ -1.74
VRK1-203ENST00000555067 CCDC126Q96EE4 140 aa4.21□□□□□ -1.74
VRK1-203ENST00000555067 CELF6Q96J87 481 aaKnown RBP4.21□□□□□ -1.74
VRK1-203ENST00000555067 C8orf76Q96K31 380 aa4.21□□□□□ -1.74
VRK1-203ENST00000555067 OXGR1Q96P68 337 aa4.21□□□□□ -1.74
VRK1-203ENST00000555067 TSSK3Q96PN8 268 aa4.21□□□□□ -1.74
VRK1-203ENST00000555067 CSPG4P5Q96PW8 444 aa4.21□□□□□ -1.74
VRK1-203ENST00000555067 CYTH2Q99418 400 aa4.21□□□□□ -1.74
VRK1-203ENST00000555067 REEP4Q9H6H4 257 aa4.21□□□□□ -1.74
VRK1-203ENST00000555067 CSNK1G1Q9HCP0 422 aa4.21□□□□□ -1.74
VRK1-203ENST00000555067 PRSS16Q9NQE7 514 aa4.21□□□□□ -1.74
VRK1-203ENST00000555067 ZNF275Q9NSD4 429 aaPredicted RBP4.21□□□□□ -1.74
VRK1-203ENST00000555067 ZNF446Q9NWS9 450 aa4.21□□□□□ -1.74
VRK1-203ENST00000555067 ELOVL2Q9NXB9 296 aa4.21□□□□□ -1.74
VRK1-203ENST00000555067 THYN1Q9P016 225 aa4.21□□□□□ -1.74
VRK1-203ENST00000555067 IFNKQ9P0W0 207 aa4.21□□□□□ -1.74
VRK1-203ENST00000555067 KLK13Q9UKR3 277 aa4.21□□□□□ -1.74
VRK1-203ENST00000555067 KCNIP3Q9Y2W7 256 aa4.21□□□□□ -1.74
VRK1-203ENST00000555067 CSNK1G3Q9Y6M4 447 aa4.21□□□□□ -1.74
VRK1-203ENST00000555067 TDRD15B5MCY1 1934 aaKnown RBP4.21□□□□□ -1.74
VRK1-203ENST00000555067 ZNF318Q5VUA4 2279 aa4.2□□□□□ -1.74
VRK1-203ENST00000555067 TRBV9A0A0B4J1U6 114 aa4.2□□□□□ -1.74
VRK1-203ENST00000555067 TMEM120BA0PK00 339 aa4.2□□□□□ -1.74
VRK1-203ENST00000555067 PP2D1A8MPX8 630 aa4.2□□□□□ -1.74
VRK1-203ENST00000555067 IDSB3KWA1 339 aa4.2□□□□□ -1.74
VRK1-203ENST00000555067 TRDCB7Z8K6 153 aa4.2□□□□□ -1.74
VRK1-203ENST00000555067 GFYI3L273 518 aa4.2□□□□□ -1.74
VRK1-203ENST00000555067 SIRPB1O00241 398 aa4.2□□□□□ -1.74
VRK1-203ENST00000555067 PRKYO43930 277 aa4.2□□□□□ -1.74
VRK1-203ENST00000555067 TOM1O60784 492 aa4.2□□□□□ -1.74
VRK1-203ENST00000555067 NXPH4O95158 308 aa4.2□□□□□ -1.74
VRK1-203ENST00000555067 S100A6P06703 90 aa4.2□□□□□ -1.74
VRK1-203ENST00000555067 RNH1P13489 461 aaKnown RBP4.2□□□□□ -1.74
VRK1-203ENST00000555067 COX5AP20674 150 aa4.2□□□□□ -1.74
VRK1-203ENST00000555067 SERPINA2P20848 420 aa4.2□□□□□ -1.74
VRK1-203ENST00000555067 IDSP22304 550 aa4.2□□□□□ -1.74
VRK1-203ENST00000555067 TSFMP43897 325 aaKnown RBP4.2□□□□□ -1.74
VRK1-203ENST00000555067 PRKXP51817 358 aa4.2□□□□□ -1.74
VRK1-203ENST00000555067 PLTPP55058 493 aa4.2□□□□□ -1.74
VRK1-203ENST00000555067 PKNOX1P55347 436 aa4.2□□□□□ -1.74
VRK1-203ENST00000555067 ERVK-16P61578 105 aa4.2□□□□□ -1.74
VRK1-203ENST00000555067 ERVK-25P63136 954 aa4.2□□□□□ -1.74
VRK1-203ENST00000555067 CARD16Q5EG05 197 aa4.2□□□□□ -1.74
VRK1-203ENST00000555067 GPR107Q5VW38 600 aa4.2□□□□□ -1.74
VRK1-203ENST00000555067 ZNF57Q68EA5 555 aaPredicted RBP4.2□□□□□ -1.74
VRK1-203ENST00000555067 SLC25A48Q6ZT89 311 aaKnown RBP4.2□□□□□ -1.74
VRK1-203ENST00000555067 NUFIP2Q7Z417 695 aaKnown RBP4.2□□□□□ -1.74
VRK1-203ENST00000555067 SNX20Q7Z614 316 aa4.2□□□□□ -1.74
VRK1-203ENST00000555067 MTURNQ8N3F0 131 aa4.2□□□□□ -1.74
VRK1-203ENST00000555067 ZNF491Q8N8L2 437 aa4.2□□□□□ -1.74
VRK1-203ENST00000555067 RFESDQ8TAC1 157 aa4.2□□□□□ -1.74
VRK1-203ENST00000555067 ZPLD1Q8TCW7 415 aa4.2□□□□□ -1.74
VRK1-203ENST00000555067 UFD1Q92890 307 aa4.2□□□□□ -1.74
VRK1-203ENST00000555067 MYDGFQ969H8 173 aa4.2□□□□□ -1.74
VRK1-203ENST00000555067 C11orf52Q96A22 123 aa4.2□□□□□ -1.74
VRK1-203ENST00000555067 JSRP1Q96MG2 331 aaPredicted RBP4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms