RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 P2RX1P51575 399 aa14.38□□□□□ -0.11
SYNE3-203ENST00000554873 METAP1P53582 386 aa14.38□□□□□ -0.11
SYNE3-203ENST00000554873 CCINQ13939 588 aa14.38□□□□□ -0.11
SYNE3-203ENST00000554873 NKAPLQ5M9Q1 402 aa14.38□□□□□ -0.11
SYNE3-203ENST00000554873 LY6G5CQ5SRR4 150 aa14.38□□□□□ -0.11
SYNE3-203ENST00000554873 FAM83HQ6ZRV2 1179 aaPredicted RBP14.38□□□□□ -0.11
SYNE3-203ENST00000554873 KRT77Q7Z794 578 aa14.38□□□□□ -0.11
SYNE3-203ENST00000554873 NRSN1Q8IZ57 195 aa14.38□□□□□ -0.11
SYNE3-203ENST00000554873 BEST3Q8N1M1 668 aa14.38□□□□□ -0.11
SYNE3-203ENST00000554873 OR6T1Q8NGN1 323 aa14.38□□□□□ -0.11
SYNE3-203ENST00000554873 STOML3Q8TAV4 291 aa14.38□□□□□ -0.11
SYNE3-203ENST00000554873 PAQR8Q8TEZ7 354 aa14.38□□□□□ -0.11
SYNE3-203ENST00000554873 SLAMF9Q96A28 289 aa14.38□□□□□ -0.11
SYNE3-203ENST00000554873 DTD2Q96FN9 168 aa14.38□□□□□ -0.11
SYNE3-203ENST00000554873 PRRC1Q96M27 445 aa14.38□□□□□ -0.11
SYNE3-203ENST00000554873 CLCC1Q96S66 551 aa14.38□□□□□ -0.11
SYNE3-203ENST00000554873 TEAD3Q99594 435 aa14.38□□□□□ -0.11
SYNE3-203ENST00000554873 NRIP2Q9BQI9 281 aa14.38□□□□□ -0.11
SYNE3-203ENST00000554873 TBX19O60806 448 aa14.37□□□□□ -0.11
SYNE3-203ENST00000554873 EPPINO95925 133 aa14.37□□□□□ -0.11
SYNE3-203ENST00000554873 CD2P06729 351 aa14.37□□□□□ -0.11
SYNE3-203ENST00000554873 PRG2P13727 222 aa14.37□□□□□ -0.11
SYNE3-203ENST00000554873 GNSP15586 552 aa14.37□□□□□ -0.11
SYNE3-203ENST00000554873 ACVR1BP36896 505 aa14.37□□□□□ -0.11
SYNE3-203ENST00000554873 FRKP42685 505 aaPredicted RBP14.37□□□□□ -0.11
SYNE3-203ENST00000554873 TEAD2Q15562 447 aa14.37□□□□□ -0.11
SYNE3-203ENST00000554873 PARS2Q7L3T8 475 aaKnown RBP14.37□□□□□ -0.11
SYNE3-203ENST00000554873 ZNF383Q8NA42 475 aa14.37□□□□□ -0.11
SYNE3-203ENST00000554873 PPP1R16AQ96I34 528 aa14.37□□□□□ -0.11
SYNE3-203ENST00000554873 SMAD5Q99717 465 aaKnown RBP14.37□□□□□ -0.11
SYNE3-203ENST00000554873 TSPAN10Q9H1Z9 355 aaPredicted RBP14.37□□□□□ -0.11
SYNE3-203ENST00000554873 CCDC86Q9H6F5 360 aaKnown RBP14.37□□□□□ -0.11
SYNE3-203ENST00000554873 LHX9Q9NQ69 397 aa14.37□□□□□ -0.11
SYNE3-203ENST00000554873 HINT3Q9NQE9 182 aaKnown RBP14.37□□□□□ -0.11
SYNE3-203ENST00000554873 SPHK2Q9NRA0 654 aa14.37□□□□□ -0.11
SYNE3-203ENST00000554873 HCFC1R1Q9NWW0 138 aa14.37□□□□□ -0.11
SYNE3-203ENST00000554873 COL4A6Q14031 1691 aa14.37□□□□□ -0.11
SYNE3-203ENST00000554873 A0A087WUU8 490 aa14.37□□□□□ -0.11
SYNE3-203ENST00000554873 PPM1DO15297 605 aa14.37□□□□□ -0.11
SYNE3-203ENST00000554873 TMPRSS11DO60235 418 aa14.37□□□□□ -0.11
SYNE3-203ENST00000554873 LILRB3O75022 631 aa14.37□□□□□ -0.11
SYNE3-203ENST00000554873 ARL6IP5O75915 188 aa14.37□□□□□ -0.11
SYNE3-203ENST00000554873 CD8AP01732 235 aa14.37□□□□□ -0.11
SYNE3-203ENST00000554873 NR2F1P10589 423 aa14.37□□□□□ -0.11
SYNE3-203ENST00000554873 CBFBQ13951 182 aa14.37□□□□□ -0.11
SYNE3-203ENST00000554873 PGGHGQ32M88 737 aa14.37□□□□□ -0.11
SYNE3-203ENST00000554873 GFOD2Q3B7J2 385 aa14.37□□□□□ -0.11
SYNE3-203ENST00000554873 LCTLQ6UWM7 567 aa14.37□□□□□ -0.11
SYNE3-203ENST00000554873 IL34Q6ZMJ4 242 aa14.37□□□□□ -0.11
SYNE3-203ENST00000554873 OVCH1Q7RTY7 1134 aa14.37□□□□□ -0.11
SYNE3-203ENST00000554873 SZRD1Q7Z422 152 aa14.37□□□□□ -0.11
SYNE3-203ENST00000554873 CPOQ8IVL8 374 aa14.37□□□□□ -0.11
SYNE3-203ENST00000554873 GID4Q8IVV7 300 aa14.37□□□□□ -0.11
SYNE3-203ENST00000554873 OR5AR1Q8NGP9 310 aa14.37□□□□□ -0.11
SYNE3-203ENST00000554873 MS4A8Q9BY19 250 aa14.37□□□□□ -0.11
SYNE3-203ENST00000554873 CNIH4Q9P003 139 aa14.37□□□□□ -0.11
SYNE3-203ENST00000554873 ASF1AQ9Y294 204 aa14.37□□□□□ -0.11
SYNE3-203ENST00000554873 AK6Q9Y3D8 172 aaKnown RBP14.37□□□□□ -0.11
SYNE3-203ENST00000554873 A0A1W2PPK0 400 aa14.37□□□□□ -0.11
SYNE3-203ENST00000554873 ANTXRLA6NF34 631 aa14.37□□□□□ -0.11
SYNE3-203ENST00000554873 SLC25A4P12235 298 aa14.37□□□□□ -0.11
SYNE3-203ENST00000554873 ERV3-1Q14264 604 aa14.37□□□□□ -0.11
SYNE3-203ENST00000554873 NUDT13Q86X67 352 aa14.37□□□□□ -0.11
SYNE3-203ENST00000554873 OR13C5Q8NGS8 318 aa14.37□□□□□ -0.11
SYNE3-203ENST00000554873 SLC25A38Q96DW6 304 aa14.37□□□□□ -0.11
SYNE3-203ENST00000554873 RAB3CQ96E17 227 aa14.37□□□□□ -0.11
SYNE3-203ENST00000554873 RHBGQ9H310 441 aa14.37□□□□□ -0.11
SYNE3-203ENST00000554873 TMEM100Q9NV29 134 aa14.37□□□□□ -0.11
SYNE3-203ENST00000554873 GFOD1Q9NXC2 390 aa14.37□□□□□ -0.11
SYNE3-203ENST00000554873 SAGE1Q9NXZ1 904 aa14.37□□□□□ -0.11
SYNE3-203ENST00000554873 P2RX2Q9UBL9 471 aa14.37□□□□□ -0.11
SYNE3-203ENST00000554873 TRPC4Q9UBN4 977 aa14.37□□□□□ -0.11
SYNE3-203ENST00000554873 KIF26AQ9ULI4 1882 aaPredicted RBP14.36□□□□□ -0.11
SYNE3-203ENST00000554873 FEZF1A0PJY2 475 aa14.36□□□□□ -0.11
SYNE3-203ENST00000554873 OR5H14A6NHG9 310 aa14.36□□□□□ -0.11
SYNE3-203ENST00000554873 C8AP07357 584 aa14.36□□□□□ -0.11
SYNE3-203ENST00000554873 RPE65Q16518 533 aa14.36□□□□□ -0.11
SYNE3-203ENST00000554873 PYY3Q5JQD4 70 aa14.36□□□□□ -0.11
SYNE3-203ENST00000554873 DMKNQ6E0U4 476 aaPredicted RBP14.36□□□□□ -0.11
SYNE3-203ENST00000554873 ACOT7LQ6ZUV0 252 aa14.36□□□□□ -0.11
SYNE3-203ENST00000554873 AMER3Q8N944 861 aa14.36□□□□□ -0.11
SYNE3-203ENST00000554873 ING5Q8WYH8 240 aa14.36□□□□□ -0.11
SYNE3-203ENST00000554873 GHSRQ92847 366 aa14.36□□□□□ -0.11
SYNE3-203ENST00000554873 LRIG1Q96JA1 1093 aa14.36□□□□□ -0.11
SYNE3-203ENST00000554873 RSRP1Q9BUV0 290 aa14.36□□□□□ -0.11
SYNE3-203ENST00000554873 INPP5EQ9NRR6 644 aa14.36□□□□□ -0.11
SYNE3-203ENST00000554873 TAC3Q9UHF0 121 aa14.36□□□□□ -0.11
SYNE3-203ENST00000554873 PCYT1BQ9Y5K3 369 aaPredicted RBP14.36□□□□□ -0.11
SYNE3-203ENST00000554873 F5H0A9 414 aaPredicted RBP14.36□□□□□ -0.11
SYNE3-203ENST00000554873 PAPLNO95428 1278 aa14.36□□□□□ -0.11
SYNE3-203ENST00000554873 SLC2A10O95528 541 aa14.36□□□□□ -0.11
SYNE3-203ENST00000554873 ALPPL2P10696 532 aa14.36□□□□□ -0.11
SYNE3-203ENST00000554873 F2RL1P55085 397 aa14.36□□□□□ -0.11
SYNE3-203ENST00000554873 PJVKQ0ZLH3 352 aa14.36□□□□□ -0.11
SYNE3-203ENST00000554873 SKP2Q13309 424 aa14.36□□□□□ -0.11
SYNE3-203ENST00000554873 C21orf62-AS1Q17RA5 79 aa14.36□□□□□ -0.11
SYNE3-203ENST00000554873 LBHQ53QV2 105 aaPredicted RBP14.36□□□□□ -0.11
SYNE3-203ENST00000554873 BEX5Q5H9J7 111 aa14.36□□□□□ -0.11
SYNE3-203ENST00000554873 LY6G6FQ5SQ64 297 aa14.36□□□□□ -0.11
SYNE3-203ENST00000554873 TMEM69Q5SWH9 247 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms