RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 ZNF454Q8N9F8 522 aa12.94□□□□□ -0.34
VTI1B-204ENST00000554659 SLC41A2Q96JW4 573 aa12.94□□□□□ -0.34
VTI1B-204ENST00000554659 ANKRD30BLA7E2S9 258 aa12.94□□□□□ -0.34
VTI1B-204ENST00000554659 I6L893 689 aaPredicted RBP12.94□□□□□ -0.34
VTI1B-204ENST00000554659 APLNRP35414 380 aa12.94□□□□□ -0.34
VTI1B-204ENST00000554659 SERPINF1P36955 418 aa12.94□□□□□ -0.34
VTI1B-204ENST00000554659 TSFMP43897 325 aaKnown RBP12.94□□□□□ -0.34
VTI1B-204ENST00000554659 BTG1P62324 171 aa12.94□□□□□ -0.34
VTI1B-204ENST00000554659 TEKQ02763 1124 aa12.94□□□□□ -0.34
VTI1B-204ENST00000554659 FBXW12Q6X9E4 464 aa12.94□□□□□ -0.34
VTI1B-204ENST00000554659 GDF7Q7Z4P5 450 aa12.94□□□□□ -0.34
VTI1B-204ENST00000554659 BSCL2Q96G97 398 aaPredicted RBP12.94□□□□□ -0.34
VTI1B-204ENST00000554659 WDR76Q9H967 626 aa12.94□□□□□ -0.34
VTI1B-204ENST00000554659 PATZ1Q9HBE1 687 aaKnown RBP12.94□□□□□ -0.34
VTI1B-204ENST00000554659 GALNT9Q9HCQ5 603 aa12.94□□□□□ -0.34
VTI1B-204ENST00000554659 RGPD5Q99666 1765 aa12.94□□□□□ -0.34
VTI1B-204ENST00000554659 A0A0B4J2A0 478 aa12.94□□□□□ -0.34
VTI1B-204ENST00000554659 ZNF593O00488 134 aaPredicted RBP12.94□□□□□ -0.34
VTI1B-204ENST00000554659 SOCS6O14544 535 aa12.94□□□□□ -0.34
VTI1B-204ENST00000554659 ZNF780AO75290 641 aaPredicted RBP12.94□□□□□ -0.34
VTI1B-204ENST00000554659 SERPINA2P20848 420 aa12.94□□□□□ -0.34
VTI1B-204ENST00000554659 VASPP50552 380 aaPredicted RBP12.94□□□□□ -0.34
VTI1B-204ENST00000554659 CST9LP1Q5W188 147 aa12.94□□□□□ -0.34
VTI1B-204ENST00000554659 ADAMTSL4Q6UY14 1074 aa12.94□□□□□ -0.34
VTI1B-204ENST00000554659 CADM3Q8N126 398 aa12.94□□□□□ -0.34
VTI1B-204ENST00000554659 OR10K1Q8NGX5 313 aa12.94□□□□□ -0.34
VTI1B-204ENST00000554659 PPP1R35Q8TAP8 253 aa12.94□□□□□ -0.34
VTI1B-204ENST00000554659 RBMXL1Q96E39 390 aaKnown RBP12.94□□□□□ -0.34
VTI1B-204ENST00000554659 DAZAP1Q96EP5 407 aaKnown RBP12.94□□□□□ -0.34
VTI1B-204ENST00000554659 CXCL16Q9H2A7 254 aa12.94□□□□□ -0.34
VTI1B-204ENST00000554659 NTN4Q9HB63 628 aa12.94□□□□□ -0.34
VTI1B-204ENST00000554659 SHPKQ9UHJ6 478 aa12.94□□□□□ -0.34
VTI1B-204ENST00000554659 TMEM129A0AVI4 362 aa12.94□□□□□ -0.34
VTI1B-204ENST00000554659 SERINC4A6NH21 518 aa12.94□□□□□ -0.34
VTI1B-204ENST00000554659 CEBPZOSA8MTT3 80 aa12.94□□□□□ -0.34
VTI1B-204ENST00000554659 HIDE1A8MVS5 230 aa12.94□□□□□ -0.34
VTI1B-204ENST00000554659 GFRA2O00451 464 aa12.94□□□□□ -0.34
VTI1B-204ENST00000554659 CLEC2LP0C7M8 214 aa12.94□□□□□ -0.34
VTI1B-204ENST00000554659 CLDN12P56749 244 aa12.94□□□□□ -0.34
VTI1B-204ENST00000554659 CRMP1Q14194 572 aa12.94□□□□□ -0.34
VTI1B-204ENST00000554659 GPR176Q14439 515 aa12.94□□□□□ -0.34
VTI1B-204ENST00000554659 CD276Q5ZPR3 534 aa12.94□□□□□ -0.34
VTI1B-204ENST00000554659 DPY19L2P2Q6ZN68 376 aa12.94□□□□□ -0.34
VTI1B-204ENST00000554659 TMEM106AQ96A25 262 aa12.94□□□□□ -0.34
VTI1B-204ENST00000554659 SLC25A46Q96AG3 418 aa12.94□□□□□ -0.34
VTI1B-204ENST00000554659 ARPC5LQ9BPX5 153 aa12.94□□□□□ -0.34
VTI1B-204ENST00000554659 SLCO5A1Q9H2Y9 848 aa12.94□□□□□ -0.34
VTI1B-204ENST00000554659 FBXO8Q9NRD0 319 aa12.94□□□□□ -0.34
VTI1B-204ENST00000554659 NPFFR2Q9Y5X5 522 aa12.94□□□□□ -0.34
VTI1B-204ENST00000554659 SLC6A11P48066 632 aa12.94□□□□□ -0.34
VTI1B-204ENST00000554659 RFLNAQ6ZTI6 216 aa12.94□□□□□ -0.34
VTI1B-204ENST00000554659 PGAP1Q75T13 922 aa12.94□□□□□ -0.34
VTI1B-204ENST00000554659 MRPL43Q8N983 215 aaKnown RBP12.94□□□□□ -0.34
VTI1B-204ENST00000554659 OR6T1Q8NGN1 323 aa12.94□□□□□ -0.34
VTI1B-204ENST00000554659 SLC7A6Q92536 515 aa12.94□□□□□ -0.34
VTI1B-204ENST00000554659 RSC1A1Q92681 617 aa12.94□□□□□ -0.34
VTI1B-204ENST00000554659 SGK3Q96BR1 496 aa12.94□□□□□ -0.34
VTI1B-204ENST00000554659 MS4A4AQ96JQ5 239 aa12.94□□□□□ -0.34
VTI1B-204ENST00000554659 MCOLN1Q9GZU1 580 aa12.94□□□□□ -0.34
VTI1B-204ENST00000554659 NDRG4Q9ULP0 352 aaKnown RBP12.94□□□□□ -0.34
VTI1B-204ENST00000554659 TRIM23P36406 574 aa12.93□□□□□ -0.34
VTI1B-204ENST00000554659 RPS19P39019 145 aaKnown RBP12.93□□□□□ -0.34
VTI1B-204ENST00000554659 LMNTD1Q8N9Z9 388 aa12.93□□□□□ -0.34
VTI1B-204ENST00000554659 TMEM255BQ8WV15 326 aa12.93□□□□□ -0.34
VTI1B-204ENST00000554659 ZNF195O14628 629 aa12.93□□□□□ -0.34
VTI1B-204ENST00000554659 ATP1B1P05026 303 aa12.93□□□□□ -0.34
VTI1B-204ENST00000554659 MRPS34P82930 218 aaKnown RBP12.93□□□□□ -0.34
VTI1B-204ENST00000554659 B3GLCTQ6Y288 498 aa12.93□□□□□ -0.34
VTI1B-204ENST00000554659 RSPRY1Q96DX4 576 aa12.93□□□□□ -0.34
VTI1B-204ENST00000554659 SLC19A3Q9BZV2 496 aa12.93□□□□□ -0.34
VTI1B-204ENST00000554659 CLEC2DQ9UHP7 191 aa12.93□□□□□ -0.34
VTI1B-204ENST00000554659 CA14Q9ULX7 337 aa12.93□□□□□ -0.34
VTI1B-204ENST00000554659 BHLHE40O14503 412 aa12.93□□□□□ -0.34
VTI1B-204ENST00000554659 GP2P55259 537 aaKnown RBP12.93□□□□□ -0.34
VTI1B-204ENST00000554659 PCBD1P61457 104 aa12.93□□□□□ -0.34
VTI1B-204ENST00000554659 HTR4Q13639 388 aa12.93□□□□□ -0.34
VTI1B-204ENST00000554659 HMGN3Q15651 99 aa12.93□□□□□ -0.34
VTI1B-204ENST00000554659 SLC48A1Q6P1K1 146 aa12.93□□□□□ -0.34
VTI1B-204ENST00000554659 CCDC71Q8IV32 467 aaPredicted RBP12.93□□□□□ -0.34
VTI1B-204ENST00000554659 LINC01599Q8WXQ3 324 aa12.93□□□□□ -0.34
VTI1B-204ENST00000554659 FOXN4Q96NZ1 517 aa12.93□□□□□ -0.34
VTI1B-204ENST00000554659 ARHGAP9Q9BRR9 750 aa12.93□□□□□ -0.34
VTI1B-204ENST00000554659 C20orf85Q9H1P6 137 aa12.93□□□□□ -0.34
VTI1B-204ENST00000554659 ZNF286AQ9HBT8 521 aa12.93□□□□□ -0.34
VTI1B-204ENST00000554659 SPATA6Q9NWH7 488 aaPredicted RBP12.93□□□□□ -0.34
VTI1B-204ENST00000554659 PPT2Q9UMR5 302 aa12.93□□□□□ -0.34
VTI1B-204ENST00000554659 CHD4Q14839 1912 aa12.93□□□□□ -0.34
VTI1B-204ENST00000554659 PAPLNO95428 1278 aa12.93□□□□□ -0.34
VTI1B-204ENST00000554659 KLKB1P03952 638 aa12.93□□□□□ -0.34
VTI1B-204ENST00000554659 KITLGP21583 273 aa12.93□□□□□ -0.34
VTI1B-204ENST00000554659 PLA2G7Q13093 441 aa12.93□□□□□ -0.34
VTI1B-204ENST00000554659 SLC35D3Q5M8T2 416 aa12.93□□□□□ -0.34
VTI1B-204ENST00000554659 ABHD17BQ5VST6 288 aa12.93□□□□□ -0.34
VTI1B-204ENST00000554659 ZNF740Q8NDX6 193 aa12.93□□□□□ -0.34
VTI1B-204ENST00000554659 OR14A16Q8NHC5 309 aa12.93□□□□□ -0.34
VTI1B-204ENST00000554659 TCTN2Q96GX1 697 aa12.93□□□□□ -0.34
VTI1B-204ENST00000554659 SEC22AQ96IW7 307 aa12.93□□□□□ -0.34
VTI1B-204ENST00000554659 ZNF416Q9BWM5 594 aa12.93□□□□□ -0.34
VTI1B-204ENST00000554659 C1QTNF3Q9BXJ4 246 aa12.93□□□□□ -0.34
VTI1B-204ENST00000554659 METTL9Q9H1A3 318 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms