RNA–Protein interactions for RNA: ENST00000554574.1

PPP4R3A-204, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 2

Gene PPP4R3A, Length 1,944 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-204ENST00000554574 RDH16O75452 317 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 SOX30O94993 753 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 GADD45GO95257 159 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 NSA2O95478 260 aaKnown RBP4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 ZBTB11O95625 1053 aaPredicted RBP4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 QDPRP09417 244 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 GIMD1P0DJR0 217 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 TDGF1P13385 188 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 RNH1P13489 461 aaKnown RBP4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 GNSP15586 552 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 ALDH3B2P48448 385 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 HLCSP50747 726 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 CDH12P55289 794 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 GFERP55789 205 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 SMIM11AP58511 58 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 ZXDAP98168 799 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 SPIBQ01892 262 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 NPRL3Q12980 569 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 SNTB1Q13884 538 aaKnown RBP4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 IL11RAQ14626 422 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 NADK2Q4G0N4 442 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 GPAT3Q53EU6 434 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 COLEC12Q5KU26 742 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 PIK3CD-AS1Q5SR53 167 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 LYSMD4Q5XG99 296 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 AP1ARQ63HQ0 302 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 ZCCHC12Q6PEW1 402 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 LINGO2Q7L985 606 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 C16orf62Q7Z3J2 963 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 SATL1Q86VE3 508 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 LDLRAD3Q86YD5 345 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 SLC16A11Q8NCK7 471 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 OR9A4Q8NGU2 314 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 PHF10Q8WUB8 498 aaKnown RBP4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 TMEM18Q96B42 140 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 ANKRD9Q96BM1 317 aaPredicted RBP4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 C16orf58Q96GQ5 468 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 TGM7Q96PF1 710 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 FEVQ99581 238 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 PITX2Q99697 317 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 PINK1Q9BXM7 581 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 SLC38A1Q9H2H9 487 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 OPA3Q9H6K4 179 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 ANKRA2Q9H9E1 313 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 EQTNQ9NQ60 294 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 CYSLTR2Q9NS75 346 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 STARD5Q9NSY2 213 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 GIN1Q9NXP7 522 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 CISD1Q9NZ45 108 aaKnown RBP4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 ENOPH1Q9UHY7 261 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 BLOC1S6Q9UL45 172 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 SATB2Q9UPW6 733 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 MRPS33Q9Y291 106 aaKnown RBP4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 SLC9A8Q9Y2E8 581 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 POFUT2Q9Y2G5 429 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 RNF215Q9Y6U7 377 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 MN1Q10571 1320 aaPredicted RBP4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 A0A0A6YYC8 382 aaPredicted RBP4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 LNP1A1A4G5 178 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 HYKKA2RU49 373 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 LINC01548A6NM66 108 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 H0YIG0 161 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 H3BMH7 237 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 I3L1I5 382 aaPredicted RBP4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 VCYO14598 125 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 CHST10O43529 356 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 DUX1O43812 170 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 OXSR1O95747 527 aaPredicted RBP4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 LGI1O95970 557 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 CCDC159P0C7I6 412 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 SLC35E2P0CK97 266 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 CRHBPP24387 322 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 ELK4P28324 431 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 ALDH4A1P30038 563 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 POLR2IP36954 125 aaKnown RBP4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 MAP3K8P41279 467 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 YAP1P46937 504 aaKnown RBP4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 TPD52P55327 224 aaPredicted RBP4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 GABARAPL2P60520 117 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 CXCR4P61073 352 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 IGLV3-21P80748 117 aaPredicted RBP4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 HPCAP84074 193 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 CD47Q08722 323 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 SIGLEC14Q08ET2 396 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 CAMK2DQ13557 499 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 RAPSNQ13702 412 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 DGCR6Q14129 220 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 EXOC3L2Q2M3D2 409 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 ARHGAP11BQ3KRB8 267 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 TRMT12Q53H54 448 aaKnown RBP4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 ZNF770Q6IQ21 691 aaPredicted RBP4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 WDR74Q6RFH5 385 aaPredicted RBP4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 PQLC2Q6ZP29 291 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 TRILQ7L0X0 811 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 KMT5CQ86Y97 462 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 OR4N5Q8IXE1 308 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 ZNF595Q8IYB9 648 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 PARP8Q8N3A8 854 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 SLC5A8Q8N695 610 aa4.29□□□□□ -1.72
PPP4R3A-204ENST00000554574 CDRT4Q8N9R6 151 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms