RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 DMRT1Q9Y5R6 373 aa5.69□□□□□ -1.5
SCFD1-212ENST00000554486 WIF1Q9Y5W5 379 aa5.69□□□□□ -1.5
SCFD1-212ENST00000554486 CACNA1BQ00975 2339 aa5.69□□□□□ -1.5
SCFD1-212ENST00000554486 SVILO95425 2214 aa5.68□□□□□ -1.5
SCFD1-212ENST00000554486 EPG5Q9HCE0 2579 aa5.68□□□□□ -1.5
SCFD1-212ENST00000554486 SPTA1P02549 2419 aa5.68□□□□□ -1.5
SCFD1-212ENST00000554486 LRRC3CA6NJW4 275 aa5.68□□□□□ -1.5
SCFD1-212ENST00000554486 H3BNX3 289 aa5.68□□□□□ -1.5
SCFD1-212ENST00000554486 hCG_2039718K7EN88 272 aa5.68□□□□□ -1.5
SCFD1-212ENST00000554486 GTPBP1O00178 669 aaKnown RBP5.68□□□□□ -1.5
SCFD1-212ENST00000554486 AP3D1O14617 1153 aa5.68□□□□□ -1.5
SCFD1-212ENST00000554486 FFAR1O14842 300 aa5.68□□□□□ -1.5
SCFD1-212ENST00000554486 ZNF264O43296 627 aa5.68□□□□□ -1.5
SCFD1-212ENST00000554486 HCRTR2O43614 444 aa5.68□□□□□ -1.5
SCFD1-212ENST00000554486 NME2P1O60361 137 aa5.68□□□□□ -1.5
SCFD1-212ENST00000554486 FKBP6O75344 327 aa5.68□□□□□ -1.5
SCFD1-212ENST00000554486 KRT36O76013 467 aa5.68□□□□□ -1.5
SCFD1-212ENST00000554486 SNX4O95219 450 aa5.68□□□□□ -1.5
SCFD1-212ENST00000554486 MT-ND1P03886 318 aa5.68□□□□□ -1.5
SCFD1-212ENST00000554486 P04436 131 aa5.68□□□□□ -1.5
SCFD1-212ENST00000554486 GPIP06744 558 aa5.68□□□□□ -1.5
SCFD1-212ENST00000554486 SP1P08047 785 aa5.68□□□□□ -1.5
SCFD1-212ENST00000554486 UMPSP11172 480 aa5.68□□□□□ -1.5
SCFD1-212ENST00000554486 HTR2AP28223 471 aa5.68□□□□□ -1.5
SCFD1-212ENST00000554486 PCSK6P29122 969 aa5.68□□□□□ -1.5
SCFD1-212ENST00000554486 MAGEA2P43356 314 aa5.68□□□□□ -1.5
SCFD1-212ENST00000554486 DNASE1L1P49184 302 aa5.68□□□□□ -1.5
SCFD1-212ENST00000554486 CLK3P49761 638 aaKnown RBP5.68□□□□□ -1.5
SCFD1-212ENST00000554486 RGS8P57771 180 aaPredicted RBP5.68□□□□□ -1.5
SCFD1-212ENST00000554486 ARG2P78540 354 aa5.68□□□□□ -1.5
SCFD1-212ENST00000554486 ZNF117Q03924 483 aa5.68□□□□□ -1.5
SCFD1-212ENST00000554486 CHRNB3Q05901 458 aa5.68□□□□□ -1.5
SCFD1-212ENST00000554486 C17orf67Q0P5P2 114 aa5.68□□□□□ -1.5
SCFD1-212ENST00000554486 EPS8Q12929 822 aa5.68□□□□□ -1.5
SCFD1-212ENST00000554486 FHL3Q13643 280 aa5.68□□□□□ -1.5
SCFD1-212ENST00000554486 ZSWIM7Q19AV6 140 aa5.68□□□□□ -1.5
SCFD1-212ENST00000554486 COL28A1Q2UY09 1125 aa5.68□□□□□ -1.5
SCFD1-212ENST00000554486 FAM98BQ52LJ0 330 aaKnown RBP5.68□□□□□ -1.5
SCFD1-212ENST00000554486 ZNF766Q5HY98 468 aa5.68□□□□□ -1.5
SCFD1-212ENST00000554486 TIGD3Q6B0B8 471 aa5.68□□□□□ -1.5
SCFD1-212ENST00000554486 SLC25A25Q6KCM7 469 aa5.68□□□□□ -1.5
SCFD1-212ENST00000554486 C19orf48Q6RUI8 117 aa5.68□□□□□ -1.5
SCFD1-212ENST00000554486 PCSK4Q6UW60 755 aa5.68□□□□□ -1.5
SCFD1-212ENST00000554486 Q6ZNX1 250 aa5.68□□□□□ -1.5
SCFD1-212ENST00000554486 ZNF550Q7Z398 422 aa5.68□□□□□ -1.5
SCFD1-212ENST00000554486 ZDHHC21Q8IVQ6 265 aa5.68□□□□□ -1.5
SCFD1-212ENST00000554486 MISPQ8IVT2 679 aa5.68□□□□□ -1.5
SCFD1-212ENST00000554486 ZNF440Q8IYI8 595 aa5.68□□□□□ -1.5
SCFD1-212ENST00000554486 ZADH2Q8N4Q0 377 aa5.68□□□□□ -1.5
SCFD1-212ENST00000554486 FADS6Q8N9I5 356 aa5.68□□□□□ -1.5
SCFD1-212ENST00000554486 WDSUB1Q8N9V3 476 aa5.68□□□□□ -1.5
SCFD1-212ENST00000554486 OR2M7Q8NG81 312 aa5.68□□□□□ -1.5
SCFD1-212ENST00000554486 OR2M3Q8NG83 312 aa5.68□□□□□ -1.5
SCFD1-212ENST00000554486 OR5W2Q8NH69 310 aa5.68□□□□□ -1.5
SCFD1-212ENST00000554486 B4GALNT2Q8NHY0 566 aa5.68□□□□□ -1.5
SCFD1-212ENST00000554486 VANGL1Q8TAA9 524 aaPredicted RBP5.68□□□□□ -1.5
SCFD1-212ENST00000554486 GPR119Q8TDV5 335 aa5.68□□□□□ -1.5
SCFD1-212ENST00000554486 PHF10Q8WUB8 498 aaKnown RBP5.68□□□□□ -1.5
SCFD1-212ENST00000554486 PYDC1Q8WXC3 89 aa5.68□□□□□ -1.5
SCFD1-212ENST00000554486 POP5Q969H6 163 aaKnown RBP5.68□□□□□ -1.5
SCFD1-212ENST00000554486 SLC35B4Q969S0 331 aa5.68□□□□□ -1.5
SCFD1-212ENST00000554486 SH3YL1Q96HL8 342 aaPredicted RBP5.68□□□□□ -1.5
SCFD1-212ENST00000554486 TMEM41AQ96HV5 264 aa5.68□□□□□ -1.5
SCFD1-212ENST00000554486 CHID1Q9BWS9 393 aa5.68□□□□□ -1.5
SCFD1-212ENST00000554486 UGT2B28Q9BY64 529 aa5.68□□□□□ -1.5
SCFD1-212ENST00000554486 DSN1Q9H410 356 aa5.68□□□□□ -1.5
SCFD1-212ENST00000554486 ARMC7Q9H6L4 198 aa5.68□□□□□ -1.5
SCFD1-212ENST00000554486 EVA1AQ9H8M9 152 aa5.68□□□□□ -1.5
SCFD1-212ENST00000554486 IL1RAPQ9NPH3 570 aa5.68□□□□□ -1.5
SCFD1-212ENST00000554486 EXOSC3Q9NQT5 275 aaKnown RBP5.68□□□□□ -1.5
SCFD1-212ENST00000554486 ARMC1Q9NVT9 282 aa5.68□□□□□ -1.5
SCFD1-212ENST00000554486 KLHL28Q9NXS3 571 aa5.68□□□□□ -1.5
SCFD1-212ENST00000554486 TUBA8Q9NY65 449 aaPredicted RBP5.68□□□□□ -1.5
SCFD1-212ENST00000554486 NDUFAF4Q9P032 175 aa5.68□□□□□ -1.5
SCFD1-212ENST00000554486 MED11Q9P086 117 aa5.68□□□□□ -1.5
SCFD1-212ENST00000554486 FBXL2Q9UKC9 423 aa5.68□□□□□ -1.5
SCFD1-212ENST00000554486 SLC13A4Q9UKG4 626 aa5.68□□□□□ -1.5
SCFD1-212ENST00000554486 AURKCQ9UQB9 309 aa5.68□□□□□ -1.5
SCFD1-212ENST00000554486 TP53TG5Q9Y2B4 290 aa5.68□□□□□ -1.5
SCFD1-212ENST00000554486 SLC9A8Q9Y2E8 581 aa5.68□□□□□ -1.5
SCFD1-212ENST00000554486 KLF13Q9Y2Y9 288 aaPredicted RBP5.68□□□□□ -1.5
SCFD1-212ENST00000554486 ENPP4Q9Y6X5 453 aa5.68□□□□□ -1.5
SCFD1-212ENST00000554486 TRAV17A0A0B4J275 112 aa5.67□□□□□ -1.5
SCFD1-212ENST00000554486 ANKUB1A6NFN9 424 aa5.67□□□□□ -1.5
SCFD1-212ENST00000554486 J3KTA2 159 aa5.67□□□□□ -1.5
SCFD1-212ENST00000554486 FAAHO00519 579 aa5.67□□□□□ -1.5
SCFD1-212ENST00000554486 PEX1O43933 1283 aa5.67□□□□□ -1.5
SCFD1-212ENST00000554486 GMFGO60234 142 aa5.67□□□□□ -1.5
SCFD1-212ENST00000554486 FMO6PO60774 539 aa5.67□□□□□ -1.5
SCFD1-212ENST00000554486 TIPRLO75663 272 aa5.67□□□□□ -1.5
SCFD1-212ENST00000554486 DIRAS1O95057 198 aa5.67□□□□□ -1.5
SCFD1-212ENST00000554486 LYPD3O95274 346 aa5.67□□□□□ -1.5
SCFD1-212ENST00000554486 THY1P04216 161 aa5.67□□□□□ -1.5
SCFD1-212ENST00000554486 IFNW1P05000 195 aa5.67□□□□□ -1.5
SCFD1-212ENST00000554486 FABP3P05413 133 aa5.67□□□□□ -1.5
SCFD1-212ENST00000554486 LINGO3P0C6S8 592 aa5.67□□□□□ -1.5
SCFD1-212ENST00000554486 RFPL3SP0C7P2 107 aa5.67□□□□□ -1.5
SCFD1-212ENST00000554486 HKR1P10072 659 aa5.67□□□□□ -1.5
SCFD1-212ENST00000554486 PSMA4P25789 261 aaKnown RBP5.67□□□□□ -1.5
SCFD1-212ENST00000554486 MST1P26927 711 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms