RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 PRR14LQ5THK1 2151 aa11.56□□□□□ -0.56
SHMT2-211ENST00000554310 CYP2R1Q6VVX0 501 aa11.56□□□□□ -0.56
SHMT2-211ENST00000554310 C22orf34Q6ZV56 151 aa11.56□□□□□ -0.56
SHMT2-211ENST00000554310 SSX8Q7RTT4 187 aa11.56□□□□□ -0.56
SHMT2-211ENST00000554310 PATL1Q86TB9 770 aaKnown RBP11.56□□□□□ -0.56
SHMT2-211ENST00000554310 COMTD1Q86VU5 262 aa11.56□□□□□ -0.56
SHMT2-211ENST00000554310 RANBP3LQ86VV4 465 aaPredicted RBP11.56□□□□□ -0.56
SHMT2-211ENST00000554310 WFDC8Q8IUA0 241 aa11.56□□□□□ -0.56
SHMT2-211ENST00000554310 CCDC103Q8IW40 242 aa11.56□□□□□ -0.56
SHMT2-211ENST00000554310 ELOA3Q8NG57 546 aa11.56□□□□□ -0.56
SHMT2-211ENST00000554310 OR52E4Q8NGH9 312 aa11.56□□□□□ -0.56
SHMT2-211ENST00000554310 DNAJA4Q8WW22 397 aaPredicted RBP11.56□□□□□ -0.56
SHMT2-211ENST00000554310 ALPK1Q96QP1 1244 aa11.56□□□□□ -0.56
SHMT2-211ENST00000554310 SF3B5Q9BWJ5 86 aaKnown RBP11.56□□□□□ -0.56
SHMT2-211ENST00000554310 RSPO3Q9BXY4 272 aaPredicted RBP11.56□□□□□ -0.56
SHMT2-211ENST00000554310 PIF1Q9H611 641 aa11.56□□□□□ -0.56
SHMT2-211ENST00000554310 GMPR2Q9P2T1 348 aaKnown RBP11.56□□□□□ -0.56
SHMT2-211ENST00000554310 MALT1Q9UDY8 824 aa11.56□□□□□ -0.56
SHMT2-211ENST00000554310 MAGEL2Q9UJ55 1249 aa11.56□□□□□ -0.56
SHMT2-211ENST00000554310 FLVCR1Q9Y5Y0 555 aa11.56□□□□□ -0.56
SHMT2-211ENST00000554310 RAI1Q7Z5J4 1906 aaPredicted RBP11.56□□□□□ -0.56
SHMT2-211ENST00000554310 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.55□□□□□ -0.56
SHMT2-211ENST00000554310 A0A1B0GWA3 101 aa11.55□□□□□ -0.56
SHMT2-211ENST00000554310 TCRBV5S2A0A599 114 aa11.55□□□□□ -0.56
SHMT2-211ENST00000554310 DHRS12A0PJE2 317 aa11.55□□□□□ -0.56
SHMT2-211ENST00000554310 H0YJX3 145 aa11.55□□□□□ -0.56
SHMT2-211ENST00000554310 TPST1O60507 370 aa11.55□□□□□ -0.56
SHMT2-211ENST00000554310 MRPL33O75394 65 aaKnown RBP11.55□□□□□ -0.56
SHMT2-211ENST00000554310 VAMP5O95183 116 aa11.55□□□□□ -0.56
SHMT2-211ENST00000554310 EDNRAP25101 427 aa11.55□□□□□ -0.56
SHMT2-211ENST00000554310 HSPA13P48723 471 aa11.55□□□□□ -0.56
SHMT2-211ENST00000554310 AQP4P55087 323 aa11.55□□□□□ -0.56
SHMT2-211ENST00000554310 SLC17A1Q14916 467 aa11.55□□□□□ -0.56
SHMT2-211ENST00000554310 LRRC36Q1X8D7 754 aa11.55□□□□□ -0.56
SHMT2-211ENST00000554310 MTX3Q5HYI7 312 aa11.55□□□□□ -0.56
SHMT2-211ENST00000554310 FBXW9Q5XUX1 488 aa11.55□□□□□ -0.56
SHMT2-211ENST00000554310 ULK3Q6PHR2 472 aa11.55□□□□□ -0.56
SHMT2-211ENST00000554310 CASP12Q6UXS9 341 aa11.55□□□□□ -0.56
SHMT2-211ENST00000554310 BHLHA15Q7RTS1 189 aaPredicted RBP11.55□□□□□ -0.56
SHMT2-211ENST00000554310 ICA1LQ8NDH6 482 aa11.55□□□□□ -0.56
SHMT2-211ENST00000554310 OR9K2Q8NGE7 335 aa11.55□□□□□ -0.56
SHMT2-211ENST00000554310 OR10A6Q8NH74 314 aa11.55□□□□□ -0.56
SHMT2-211ENST00000554310 MFSD8Q8NHS3 518 aa11.55□□□□□ -0.56
SHMT2-211ENST00000554310 HSD17B8Q92506 261 aa11.55□□□□□ -0.56
SHMT2-211ENST00000554310 TMEM45BQ96B21 275 aa11.55□□□□□ -0.56
SHMT2-211ENST00000554310 ZNF775Q96BV0 537 aaPredicted RBP11.55□□□□□ -0.56
SHMT2-211ENST00000554310 CXXC4Q9H2H0 198 aa11.55□□□□□ -0.56
SHMT2-211ENST00000554310 VCXQ9H320 206 aa11.55□□□□□ -0.56
SHMT2-211ENST00000554310 NGBQ9NPG2 151 aa11.55□□□□□ -0.56
SHMT2-211ENST00000554310 PARPBPQ9NWS1 579 aa11.55□□□□□ -0.56
SHMT2-211ENST00000554310 ADPRHL2Q9NX46 363 aa11.55□□□□□ -0.56
SHMT2-211ENST00000554310 SELENONQ9NZV5 590 aa11.55□□□□□ -0.56
SHMT2-211ENST00000554310 EGFL7Q9UHF1 273 aa11.55□□□□□ -0.56
SHMT2-211ENST00000554310 A0A0B4J2E0 115 aa11.54□□□□□ -0.56
SHMT2-211ENST00000554310 A0A1B0GX12 115 aa11.54□□□□□ -0.56
SHMT2-211ENST00000554310 KLF4O43474 513 aa11.54□□□□□ -0.56
SHMT2-211ENST00000554310 FMO6PO60774 539 aa11.54□□□□□ -0.56
SHMT2-211ENST00000554310 FZD7O75084 574 aa11.54□□□□□ -0.56
SHMT2-211ENST00000554310 LYZL6O75951 148 aa11.54□□□□□ -0.56
SHMT2-211ENST00000554310 AKR7A3O95154 331 aa11.54□□□□□ -0.56
SHMT2-211ENST00000554310 IGHV1-2P23083 117 aa11.54□□□□□ -0.56
SHMT2-211ENST00000554310 LOXP28300 417 aaPredicted RBP11.54□□□□□ -0.56
SHMT2-211ENST00000554310 GTF2E2P29084 291 aaKnown RBP11.54□□□□□ -0.56
SHMT2-211ENST00000554310 TSC22D1Q15714 1073 aa11.54□□□□□ -0.56
SHMT2-211ENST00000554310 TAB1Q15750 504 aa11.54□□□□□ -0.56
SHMT2-211ENST00000554310 VMACQ2NL98 169 aa11.54□□□□□ -0.56
SHMT2-211ENST00000554310 ALG10BQ5I7T1 473 aa11.54□□□□□ -0.56
SHMT2-211ENST00000554310 C20orf204Q6ZNR8 217 aa11.54□□□□□ -0.56
SHMT2-211ENST00000554310 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.54□□□□□ -0.56
SHMT2-211ENST00000554310 ADGRG5Q8IZF4 528 aa11.54□□□□□ -0.56
SHMT2-211ENST00000554310 UBE2J2Q8N2K1 259 aa11.54□□□□□ -0.56
SHMT2-211ENST00000554310 TMEM99Q8N816 258 aa11.54□□□□□ -0.56
SHMT2-211ENST00000554310 SMYD1Q8NB12 490 aa11.54□□□□□ -0.56
SHMT2-211ENST00000554310 PAPD5Q8NDF8 572 aaKnown RBP11.54□□□□□ -0.56
SHMT2-211ENST00000554310 CANT1Q8WVQ1 401 aa11.54□□□□□ -0.56
SHMT2-211ENST00000554310 RASSF5Q8WWW0 418 aa11.54□□□□□ -0.56
SHMT2-211ENST00000554310 SLC38A4Q969I6 547 aa11.54□□□□□ -0.56
SHMT2-211ENST00000554310 HS3ST6Q96QI5 342 aa11.54□□□□□ -0.56
SHMT2-211ENST00000554310 TMEM27Q9HBJ8 222 aa11.54□□□□□ -0.56
SHMT2-211ENST00000554310 ASB6Q9NWX5 421 aa11.54□□□□□ -0.56
SHMT2-211ENST00000554310 RAB26Q9ULW5 256 aa11.54□□□□□ -0.56
SHMT2-211ENST00000554310 MAGEA13PA6NCF6 341 aa11.53□□□□□ -0.56
SHMT2-211ENST00000554310 FTCDNL1E5RQL4 147 aa11.53□□□□□ -0.56
SHMT2-211ENST00000554310 M0QX08 132 aa11.53□□□□□ -0.56
SHMT2-211ENST00000554310 OR2T1O43869 369 aa11.53□□□□□ -0.56
SHMT2-211ENST00000554310 LGI1O95970 557 aa11.53□□□□□ -0.56
SHMT2-211ENST00000554310 IGHV3-9P01782 118 aa11.53□□□□□ -0.56
SHMT2-211ENST00000554310 OPN1SWP03999 348 aa11.53□□□□□ -0.56
SHMT2-211ENST00000554310 FCGR1AP12314 374 aa11.53□□□□□ -0.56
SHMT2-211ENST00000554310 GGT1P19440 569 aa11.53□□□□□ -0.56
SHMT2-211ENST00000554310 GZMMP51124 257 aa11.53□□□□□ -0.56
SHMT2-211ENST00000554310 P2RY4P51582 365 aa11.53□□□□□ -0.56
SHMT2-211ENST00000554310 EGR4Q05215 589 aa11.53□□□□□ -0.56
SHMT2-211ENST00000554310 NRF1Q16656 503 aa11.53□□□□□ -0.56
SHMT2-211ENST00000554310 DEFB113Q30KQ7 82 aa11.53□□□□□ -0.56
SHMT2-211ENST00000554310 FAM69AQ5T7M9 428 aa11.53□□□□□ -0.56
SHMT2-211ENST00000554310 ERICH5Q6P6B1 374 aa11.53□□□□□ -0.56
SHMT2-211ENST00000554310 CCDC80Q76M96 950 aa11.53□□□□□ -0.56
SHMT2-211ENST00000554310 GPAT4Q86UL3 456 aa11.53□□□□□ -0.56
SHMT2-211ENST00000554310 P2RY8Q86VZ1 359 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms