RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 MST1LQ2TV78 715 aa16.35■□□□□ 0.21
CPSF2-203ENST00000554290 C3orf36Q3SXR2 165 aa16.35■□□□□ 0.21
CPSF2-203ENST00000554290 EPGNQ6UW88 154 aa16.35■□□□□ 0.21
CPSF2-203ENST00000554290 KTI12Q96EK9 354 aaPredicted RBP16.35■□□□□ 0.21
CPSF2-203ENST00000554290 OXGR1Q96P68 337 aa16.35■□□□□ 0.21
CPSF2-203ENST00000554290 PTDSS2Q9BVG9 487 aa16.35■□□□□ 0.21
CPSF2-203ENST00000554290 C12orf10Q9HB07 376 aa16.35■□□□□ 0.21
CPSF2-203ENST00000554290 TMBIM4Q9HC24 238 aa16.35■□□□□ 0.21
CPSF2-203ENST00000554290 CA10Q9NS85 328 aa16.35■□□□□ 0.21
CPSF2-203ENST00000554290 COL6A5A8TX70 2615 aa16.34■□□□□ 0.21
CPSF2-203ENST00000554290 RNF212BA8MTL3 300 aa16.34■□□□□ 0.21
CPSF2-203ENST00000554290 NDUFS8O00217 210 aa16.34■□□□□ 0.21
CPSF2-203ENST00000554290 POLR3GO15318 223 aaPredicted RBP16.34■□□□□ 0.21
CPSF2-203ENST00000554290 SLC43A1O75387 559 aa16.34■□□□□ 0.21
CPSF2-203ENST00000554290 UPK3AO75631 287 aa16.34■□□□□ 0.21
CPSF2-203ENST00000554290 FAM157CP0CG43 387 aa16.34■□□□□ 0.21
CPSF2-203ENST00000554290 PRKAR1BP31321 381 aa16.34■□□□□ 0.21
CPSF2-203ENST00000554290 PDLIM4P50479 330 aa16.34■□□□□ 0.21
CPSF2-203ENST00000554290 CLDN17P56750 224 aa16.34■□□□□ 0.21
CPSF2-203ENST00000554290 EGR4Q05215 589 aa16.34■□□□□ 0.21
CPSF2-203ENST00000554290 C6orf89Q6UWU4 347 aa16.34■□□□□ 0.21
CPSF2-203ENST00000554290 LINGO2Q7L985 606 aa16.34■□□□□ 0.21
CPSF2-203ENST00000554290 SLC46A3Q7Z3Q1 461 aa16.34■□□□□ 0.21
CPSF2-203ENST00000554290 NET1Q7Z628 596 aaPredicted RBP16.34■□□□□ 0.21
CPSF2-203ENST00000554290 KRT73Q86Y46 540 aa16.34■□□□□ 0.21
CPSF2-203ENST00000554290 KDM8Q8N371 416 aa16.34■□□□□ 0.21
CPSF2-203ENST00000554290 FAM169BQ8N8A8 192 aa16.34■□□□□ 0.21
CPSF2-203ENST00000554290 SLC38A4Q969I6 547 aa16.34■□□□□ 0.21
CPSF2-203ENST00000554290 SPATA5L1Q9BVQ7 753 aa16.34■□□□□ 0.21
CPSF2-203ENST00000554290 BEX2Q9BXY8 128 aa16.34■□□□□ 0.21
CPSF2-203ENST00000554290 TMEM160Q9NX00 188 aa16.34■□□□□ 0.21
CPSF2-203ENST00000554290 CRNNQ9UBG3 495 aaPredicted RBP16.34■□□□□ 0.21
CPSF2-203ENST00000554290 ALPK2Q86TB3 2170 aa16.33■□□□□ 0.2
CPSF2-203ENST00000554290 A0A096LPE4 126 aa16.33■□□□□ 0.2
CPSF2-203ENST00000554290 A0A1W2PPZ6 126 aa16.33■□□□□ 0.2
CPSF2-203ENST00000554290 VSTM5A8MXK1 200 aa16.33■□□□□ 0.2
CPSF2-203ENST00000554290 B9A039 149 aa16.33■□□□□ 0.2
CPSF2-203ENST00000554290 RPL36A-HNRNPH2H7BZ11 118 aa16.33■□□□□ 0.2
CPSF2-203ENST00000554290 NR5A2O00482 541 aa16.33■□□□□ 0.2
CPSF2-203ENST00000554290 AIM2O14862 343 aa16.33■□□□□ 0.2
CPSF2-203ENST00000554290 PDE5AO76074 875 aa16.33■□□□□ 0.2
CPSF2-203ENST00000554290 LY6HO94772 140 aa16.33■□□□□ 0.2
CPSF2-203ENST00000554290 TGDSO95455 350 aa16.33■□□□□ 0.2
CPSF2-203ENST00000554290 PPIBP23284 216 aaKnown RBP16.33■□□□□ 0.2
CPSF2-203ENST00000554290 MRPL19P49406 292 aaKnown RBP16.33■□□□□ 0.2
CPSF2-203ENST00000554290 LSM11P83369 360 aaKnown RBP eCLIP16.33■□□□□ 0.2
CPSF2-203ENST00000554290 NAAAQ02083 359 aa16.33■□□□□ 0.2
CPSF2-203ENST00000554290 FAM69AQ5T7M9 428 aa16.33■□□□□ 0.2
CPSF2-203ENST00000554290 REEP3Q6NUK4 255 aa16.33■□□□□ 0.2
CPSF2-203ENST00000554290 GPR137CQ8N3F9 429 aa16.33■□□□□ 0.2
CPSF2-203ENST00000554290 LSMEM1Q8N8F7 131 aa16.33■□□□□ 0.2
CPSF2-203ENST00000554290 OR4F15Q8NGB8 312 aa16.33■□□□□ 0.2
CPSF2-203ENST00000554290 DNAJA4Q8WW22 397 aaPredicted RBP16.33■□□□□ 0.2
CPSF2-203ENST00000554290 VRK1Q99986 396 aaPredicted RBP16.33■□□□□ 0.2
CPSF2-203ENST00000554290 PIMREGQ9BSJ6 248 aa16.33■□□□□ 0.2
CPSF2-203ENST00000554290 MYOZ1Q9NP98 299 aaPredicted RBP16.33■□□□□ 0.2
CPSF2-203ENST00000554290 TCF7L2Q9NQB0 619 aa16.33■□□□□ 0.2
CPSF2-203ENST00000554290 LPAR3Q9UBY5 353 aa16.33■□□□□ 0.2
CPSF2-203ENST00000554290 FBXO9Q9UK97 447 aaPredicted RBP16.33■□□□□ 0.2
CPSF2-203ENST00000554290 AKAP8O43823 692 aaKnown RBP16.32■□□□□ 0.2
CPSF2-203ENST00000554290 ZNF432O94892 652 aa16.32■□□□□ 0.2
CPSF2-203ENST00000554290 CECR9P0C854 216 aa16.32■□□□□ 0.2
CPSF2-203ENST00000554290 ARAFP10398 606 aa16.32■□□□□ 0.2
CPSF2-203ENST00000554290 HOXB9P17482 250 aaPredicted RBP16.32■□□□□ 0.2
CPSF2-203ENST00000554290 GZMKP49863 264 aa16.32■□□□□ 0.2
CPSF2-203ENST00000554290 TUBA1BP68363 451 aa16.32■□□□□ 0.2
CPSF2-203ENST00000554290 TUBA4AP68366 448 aa16.32■□□□□ 0.2
CPSF2-203ENST00000554290 ARF1P84077 181 aaKnown RBP16.32■□□□□ 0.2
CPSF2-203ENST00000554290 IL1RL1Q01638 556 aa16.32■□□□□ 0.2
CPSF2-203ENST00000554290 LRIF1Q5T3J3 769 aa16.32■□□□□ 0.2
CPSF2-203ENST00000554290 GCNT6Q5T4J0 391 aa16.32■□□□□ 0.2
CPSF2-203ENST00000554290 DHRS4L2Q6PKH6 230 aa16.32■□□□□ 0.2
CPSF2-203ENST00000554290 BLOC1S3Q6QNY0 202 aa16.32■□□□□ 0.2
CPSF2-203ENST00000554290 TUBA1AQ71U36 451 aa16.32■□□□□ 0.2
CPSF2-203ENST00000554290 H1FNTQ75WM6 255 aaPredicted RBP16.32■□□□□ 0.2
CPSF2-203ENST00000554290 PIK3C3Q8NEB9 887 aa16.32■□□□□ 0.2
CPSF2-203ENST00000554290 NFKBIDQ8NI38 313 aa16.32■□□□□ 0.2
CPSF2-203ENST00000554290 TMEM158Q8WZ71 300 aa16.32■□□□□ 0.2
CPSF2-203ENST00000554290 TAAR8Q969N4 342 aa16.32■□□□□ 0.2
CPSF2-203ENST00000554290 C7orf26Q96N11 449 aa16.32■□□□□ 0.2
CPSF2-203ENST00000554290 SORCS2Q96PQ0 1159 aa16.32■□□□□ 0.2
CPSF2-203ENST00000554290 REPIN1Q9BWE0 567 aaKnown RBP16.32■□□□□ 0.2
CPSF2-203ENST00000554290 HEATR1Q9H583 2144 aaKnown RBP16.32■□□□□ 0.2
CPSF2-203ENST00000554290 SLC25A37Q9NYZ2 338 aa16.32■□□□□ 0.2
CPSF2-203ENST00000554290 SELENONQ9NZV5 590 aa16.32■□□□□ 0.2
CPSF2-203ENST00000554290 TRAV36DV7A0A075B6V5 113 aa16.31■□□□□ 0.2
CPSF2-203ENST00000554290 LOC102725191A0A1B0GVB3 256 aa16.31■□□□□ 0.2
CPSF2-203ENST00000554290 A0A1B0GWA3 101 aa16.31■□□□□ 0.2
CPSF2-203ENST00000554290 PRORSD1PA6NEY8 169 aa16.31■□□□□ 0.2
CPSF2-203ENST00000554290 M0R082 166 aa16.31■□□□□ 0.2
CPSF2-203ENST00000554290 FZD7O75084 574 aa16.31■□□□□ 0.2
CPSF2-203ENST00000554290 IGLV1-44P01699 117 aa16.31■□□□□ 0.2
CPSF2-203ENST00000554290 OR4A8P0C604 315 aa16.31■□□□□ 0.2
CPSF2-203ENST00000554290 IGHV4-31P0DP07 118 aa16.31■□□□□ 0.2
CPSF2-203ENST00000554290 CBR1P16152 277 aa16.31■□□□□ 0.2
CPSF2-203ENST00000554290 NCALDP61601 193 aa16.31■□□□□ 0.2
CPSF2-203ENST00000554290 CDK6Q00534 326 aa16.31■□□□□ 0.2
CPSF2-203ENST00000554290 MFSD13AQ14CX5 517 aa16.31■□□□□ 0.2
CPSF2-203ENST00000554290 EFNB3Q15768 340 aa16.31■□□□□ 0.2
CPSF2-203ENST00000554290 ADIPOQQ15848 244 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms