RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 LRIF1Q5T3J3 769 aa5.78□□□□□ -1.48
SLIRP-203ENST00000554074 TMEM225Q6GV28 225 aa5.78□□□□□ -1.48
SLIRP-203ENST00000554074 BLOC1S3Q6QNY0 202 aa5.78□□□□□ -1.48
SLIRP-203ENST00000554074 KLHL24Q6TFL4 600 aa5.78□□□□□ -1.48
SLIRP-203ENST00000554074 CREB3L2Q70SY1 520 aa5.78□□□□□ -1.48
SLIRP-203ENST00000554074 PIGWQ7Z7B1 504 aa5.78□□□□□ -1.48
SLIRP-203ENST00000554074 SERPINA11Q86U17 422 aa5.78□□□□□ -1.48
SLIRP-203ENST00000554074 HIPK1Q86Z02 1210 aa5.78□□□□□ -1.48
SLIRP-203ENST00000554074 CLIP4Q8N3C7 705 aa5.78□□□□□ -1.48
SLIRP-203ENST00000554074 CADM2Q8N3J6 435 aa5.78□□□□□ -1.48
SLIRP-203ENST00000554074 LSMEM1Q8N8F7 131 aa5.78□□□□□ -1.48
SLIRP-203ENST00000554074 OR9I1Q8NGQ6 314 aa5.78□□□□□ -1.48
SLIRP-203ENST00000554074 OR1K1Q8NGR3 316 aa5.78□□□□□ -1.48
SLIRP-203ENST00000554074 SPATA3Q8NHX4 192 aa5.78□□□□□ -1.48
SLIRP-203ENST00000554074 BBS10Q8TAM1 723 aa5.78□□□□□ -1.48
SLIRP-203ENST00000554074 GTF2H4Q92759 462 aa5.78□□□□□ -1.48
SLIRP-203ENST00000554074 DNAJA3Q96EY1 480 aa5.78□□□□□ -1.48
SLIRP-203ENST00000554074 TMEM19Q96HH6 336 aa5.78□□□□□ -1.48
SLIRP-203ENST00000554074 ZNF385AQ96PM9 386 aaKnown RBP5.78□□□□□ -1.48
SLIRP-203ENST00000554074 CACNG6Q9BXT2 260 aa5.78□□□□□ -1.48
SLIRP-203ENST00000554074 PAIP1Q9H074 479 aaKnown RBP5.78□□□□□ -1.48
SLIRP-203ENST00000554074 ZNF385DQ9H6B1 395 aa5.78□□□□□ -1.48
SLIRP-203ENST00000554074 EVA1AQ9H8M9 152 aa5.78□□□□□ -1.48
SLIRP-203ENST00000554074 TMEM160Q9NX00 188 aa5.78□□□□□ -1.48
SLIRP-203ENST00000554074 CRNNQ9UBG3 495 aaPredicted RBP5.78□□□□□ -1.48
SLIRP-203ENST00000554074 CORO2BQ9UQ03 480 aa5.78□□□□□ -1.48
SLIRP-203ENST00000554074 RCE1Q9Y256 329 aa5.78□□□□□ -1.48
SLIRP-203ENST00000554074 ARL2BPQ9Y2Y0 163 aa5.78□□□□□ -1.48
SLIRP-203ENST00000554074 PCDHB14Q9Y5E9 798 aa5.78□□□□□ -1.48
SLIRP-203ENST00000554074 IGHV4-30-2A0A087WSY4 118 aa5.77□□□□□ -1.49
SLIRP-203ENST00000554074 A0A1W2PR80 420 aa5.77□□□□□ -1.49
SLIRP-203ENST00000554074 ZNF587BE7ETH6 402 aa5.77□□□□□ -1.49
SLIRP-203ENST00000554074 ATP6V1G2-DDX39BF2Z307 99 aa5.77□□□□□ -1.49
SLIRP-203ENST00000554074 OR2T1O43869 369 aa5.77□□□□□ -1.49
SLIRP-203ENST00000554074 DCTN3O75935 186 aa5.77□□□□□ -1.49
SLIRP-203ENST00000554074 PDE5AO76074 875 aa5.77□□□□□ -1.49
SLIRP-203ENST00000554074 ZNF432O94892 652 aa5.77□□□□□ -1.49
SLIRP-203ENST00000554074 IGLV1-44P01699 117 aa5.77□□□□□ -1.49
SLIRP-203ENST00000554074 ARAFP10398 606 aa5.77□□□□□ -1.49
SLIRP-203ENST00000554074 PRG2P13727 222 aa5.77□□□□□ -1.49
SLIRP-203ENST00000554074 PRDX6P30041 224 aa5.77□□□□□ -1.49
SLIRP-203ENST00000554074 EFNA4P52798 201 aa5.77□□□□□ -1.49
SLIRP-203ENST00000554074 VLDLRP98155 873 aa5.77□□□□□ -1.49
SLIRP-203ENST00000554074 EGR4Q05215 589 aa5.77□□□□□ -1.49
SLIRP-203ENST00000554074 BNIP2Q12982 314 aa5.77□□□□□ -1.49
SLIRP-203ENST00000554074 RAB35Q15286 201 aa5.77□□□□□ -1.49
SLIRP-203ENST00000554074 SWI5Q1ZZU3 235 aa5.77□□□□□ -1.49
SLIRP-203ENST00000554074 TBRG1Q3YBR2 411 aa5.77□□□□□ -1.49
SLIRP-203ENST00000554074 AGKQ53H12 422 aa5.77□□□□□ -1.49
SLIRP-203ENST00000554074 ZNF311Q5JNZ3 666 aa5.77□□□□□ -1.49
SLIRP-203ENST00000554074 RPS26P11Q5JNZ5 115 aaPredicted RBP5.77□□□□□ -1.49
SLIRP-203ENST00000554074 GKAP1Q5VSY0 366 aaPredicted RBP5.77□□□□□ -1.49
SLIRP-203ENST00000554074 CGB2Q6NT52 195 aa5.77□□□□□ -1.49
SLIRP-203ENST00000554074 ANKRD16Q6P6B7 361 aa5.77□□□□□ -1.49
SLIRP-203ENST00000554074 DHRS4L2Q6PKH6 230 aa5.77□□□□□ -1.49
SLIRP-203ENST00000554074 CLEC2AQ6UVW9 174 aa5.77□□□□□ -1.49
SLIRP-203ENST00000554074 NET1Q7Z628 596 aaPredicted RBP5.77□□□□□ -1.49
SLIRP-203ENST00000554074 GPAT4Q86UL3 456 aa5.77□□□□□ -1.49
SLIRP-203ENST00000554074 EPHX4Q8IUS5 362 aa5.77□□□□□ -1.49
SLIRP-203ENST00000554074 DPP10Q8N608 796 aa5.77□□□□□ -1.49
SLIRP-203ENST00000554074 MAPK1IP1LQ8NDC0 245 aa5.77□□□□□ -1.49
SLIRP-203ENST00000554074 ADPRHL1Q8NDY3 354 aa5.77□□□□□ -1.49
SLIRP-203ENST00000554074 BHLHE22Q8NFJ8 381 aaPredicted RBP5.77□□□□□ -1.49
SLIRP-203ENST00000554074 OR6S1Q8NH40 331 aa5.77□□□□□ -1.49
SLIRP-203ENST00000554074 DNAJA4Q8WW22 397 aaPredicted RBP5.77□□□□□ -1.49
SLIRP-203ENST00000554074 PROX1Q92786 737 aa5.77□□□□□ -1.49
SLIRP-203ENST00000554074 BCL2L2Q92843 193 aaPredicted RBP5.77□□□□□ -1.49
SLIRP-203ENST00000554074 VPS33AQ96AX1 596 aa5.77□□□□□ -1.49
SLIRP-203ENST00000554074 SPDL1Q96EA4 605 aa5.77□□□□□ -1.49
SLIRP-203ENST00000554074 AURKBQ96GD4 344 aaPredicted RBP5.77□□□□□ -1.49
SLIRP-203ENST00000554074 OXGR1Q96P68 337 aa5.77□□□□□ -1.49
SLIRP-203ENST00000554074 TNFRSF13CQ96RJ3 184 aa5.77□□□□□ -1.49
SLIRP-203ENST00000554074 CCT8L2Q96SF2 557 aa5.77□□□□□ -1.49
SLIRP-203ENST00000554074 ELAC2Q9BQ52 826 aaKnown RBP5.77□□□□□ -1.49
SLIRP-203ENST00000554074 KATNB1Q9BVA0 655 aa5.77□□□□□ -1.49
SLIRP-203ENST00000554074 PTDSS2Q9BVG9 487 aa5.77□□□□□ -1.49
SLIRP-203ENST00000554074 SPATA5L1Q9BVQ7 753 aa5.77□□□□□ -1.49
SLIRP-203ENST00000554074 MYOZ1Q9NP98 299 aaPredicted RBP5.77□□□□□ -1.49
SLIRP-203ENST00000554074 SAR1AQ9NR31 198 aa5.77□□□□□ -1.49
SLIRP-203ENST00000554074 ADPRHL2Q9NX46 363 aa5.77□□□□□ -1.49
SLIRP-203ENST00000554074 SLC25A37Q9NYZ2 338 aa5.77□□□□□ -1.49
SLIRP-203ENST00000554074 LEF1Q9UJU2 399 aaPredicted RBP5.77□□□□□ -1.49
SLIRP-203ENST00000554074 FBXO9Q9UK97 447 aaPredicted RBP5.77□□□□□ -1.49
SLIRP-203ENST00000554074 AP3M1Q9Y2T2 418 aa5.77□□□□□ -1.49
SLIRP-203ENST00000554074 NDUFAF1Q9Y375 327 aa5.77□□□□□ -1.49
SLIRP-203ENST00000554074 ATP23Q9Y6H3 246 aa5.77□□□□□ -1.49
SLIRP-203ENST00000554074 CAPN7Q9Y6W3 813 aa5.77□□□□□ -1.49
SLIRP-203ENST00000554074 PMF1-BGLAPU3KQ54 211 aa5.77□□□□□ -1.49
SLIRP-203ENST00000554074 TRBV5-3A0A0A0MS03 114 aa5.76□□□□□ -1.49
SLIRP-203ENST00000554074 IGHV1-18A0A0C4DH31 117 aa5.76□□□□□ -1.49
SLIRP-203ENST00000554074 PRORSD1PA6NEY8 169 aa5.76□□□□□ -1.49
SLIRP-203ENST00000554074 A8MV72 311 aaPredicted RBP5.76□□□□□ -1.49
SLIRP-203ENST00000554074 C5orf58C9J3I9 102 aa5.76□□□□□ -1.49
SLIRP-203ENST00000554074 NDUFS8O00217 210 aa5.76□□□□□ -1.49
SLIRP-203ENST00000554074 NDUFAB1O14561 156 aa5.76□□□□□ -1.49
SLIRP-203ENST00000554074 AIM2O14862 343 aa5.76□□□□□ -1.49
SLIRP-203ENST00000554074 ANGPT2O15123 496 aa5.76□□□□□ -1.49
SLIRP-203ENST00000554074 AKAP8O43823 692 aaKnown RBP5.76□□□□□ -1.49
SLIRP-203ENST00000554074 UPK3AO75631 287 aa5.76□□□□□ -1.49
SLIRP-203ENST00000554074 KRT33AO76009 404 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms