RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 TMEM44Q2T9K0 475 aa11.54□□□□□ -0.56
VIPAS39-206ENST00000553888 VASNQ6EMK4 673 aa11.54□□□□□ -0.56
VIPAS39-206ENST00000553888 RPTNQ6XPR3 784 aa11.54□□□□□ -0.56
VIPAS39-206ENST00000553888 FAM122BQ7Z309 247 aa11.54□□□□□ -0.56
VIPAS39-206ENST00000553888 KLHL36Q8N4N3 616 aa11.54□□□□□ -0.56
VIPAS39-206ENST00000553888 ACBD7Q8N6N7 88 aa11.54□□□□□ -0.56
VIPAS39-206ENST00000553888 OR6K6Q8NGW6 343 aa11.54□□□□□ -0.56
VIPAS39-206ENST00000553888 MCFD2Q8NI22 146 aa11.54□□□□□ -0.56
VIPAS39-206ENST00000553888 ARL5BQ96KC2 179 aa11.54□□□□□ -0.56
VIPAS39-206ENST00000553888 IMMP1LQ96LU5 166 aa11.54□□□□□ -0.56
VIPAS39-206ENST00000553888 LRFN5Q96NI6 719 aa11.54□□□□□ -0.56
VIPAS39-206ENST00000553888 TSPAN32Q96QS1 320 aa11.54□□□□□ -0.56
VIPAS39-206ENST00000553888 DDOQ99489 341 aa11.54□□□□□ -0.56
VIPAS39-206ENST00000553888 C6orf62Q9GZU0 229 aaPredicted RBP11.54□□□□□ -0.56
VIPAS39-206ENST00000553888 TPK1Q9H3S4 243 aa11.54□□□□□ -0.56
VIPAS39-206ENST00000553888 METTL7AQ9H8H3 244 aa11.54□□□□□ -0.56
VIPAS39-206ENST00000553888 FBXL2Q9UKC9 423 aa11.54□□□□□ -0.56
VIPAS39-206ENST00000553888 NXT1Q9UKK6 140 aaKnown RBP11.54□□□□□ -0.56
VIPAS39-206ENST00000553888 STUB1Q9UNE7 303 aa11.54□□□□□ -0.56
VIPAS39-206ENST00000553888 SF3B6Q9Y3B4 125 aaKnown RBP11.54□□□□□ -0.56
VIPAS39-206ENST00000553888 A0A1W2PQL4 384 aaPredicted RBP11.53□□□□□ -0.56
VIPAS39-206ENST00000553888 SLC22A31A6NKX4 558 aa11.53□□□□□ -0.56
VIPAS39-206ENST00000553888 B4E171 279 aa11.53□□□□□ -0.56
VIPAS39-206ENST00000553888 C9orf172C9J069 976 aa11.53□□□□□ -0.56
VIPAS39-206ENST00000553888 BMP4P12644 408 aa11.53□□□□□ -0.56
VIPAS39-206ENST00000553888 PRKCAP17252 672 aa11.53□□□□□ -0.56
VIPAS39-206ENST00000553888 TCN2P20062 427 aa11.53□□□□□ -0.56
VIPAS39-206ENST00000553888 PSMA1P25786 263 aaKnown RBP11.53□□□□□ -0.56
VIPAS39-206ENST00000553888 UGT2B10P36537 528 aa11.53□□□□□ -0.56
VIPAS39-206ENST00000553888 RPS19P39019 145 aaKnown RBP11.53□□□□□ -0.56
VIPAS39-206ENST00000553888 POLR2HP52434 150 aaKnown RBP11.53□□□□□ -0.56
VIPAS39-206ENST00000553888 FABP5Q01469 135 aa11.53□□□□□ -0.56
VIPAS39-206ENST00000553888 ZNF85Q03923 595 aa11.53□□□□□ -0.56
VIPAS39-206ENST00000553888 C19orf57Q0VDD7 668 aa11.53□□□□□ -0.56
VIPAS39-206ENST00000553888 FOXF1Q12946 379 aa11.53□□□□□ -0.56
VIPAS39-206ENST00000553888 C16orf54Q6UWD8 224 aa11.53□□□□□ -0.56
VIPAS39-206ENST00000553888 PSD4Q8NDX1 1056 aa11.53□□□□□ -0.56
VIPAS39-206ENST00000553888 C1GALT1C1Q96EU7 318 aa11.53□□□□□ -0.56
VIPAS39-206ENST00000553888 KCNS3Q9BQ31 491 aa11.53□□□□□ -0.56
VIPAS39-206ENST00000553888 ASPNQ9BXN1 380 aa11.53□□□□□ -0.56
VIPAS39-206ENST00000553888 TAS2R5Q9NYW4 299 aa11.53□□□□□ -0.56
VIPAS39-206ENST00000553888 METTL15A6NJ78 407 aa11.53□□□□□ -0.56
VIPAS39-206ENST00000553888 DKK1O94907 266 aa11.53□□□□□ -0.56
VIPAS39-206ENST00000553888 JMJD7P0C870 316 aa11.53□□□□□ -0.56
VIPAS39-206ENST00000553888 AHCYP23526 432 aa11.53□□□□□ -0.56
VIPAS39-206ENST00000553888 FOLR3P41439 243 aa11.53□□□□□ -0.56
VIPAS39-206ENST00000553888 PRPS1P60891 318 aa11.53□□□□□ -0.56
VIPAS39-206ENST00000553888 SLC6A19Q695T7 634 aa11.53□□□□□ -0.56
VIPAS39-206ENST00000553888 OR6Q1Q8NGQ2 317 aa11.53□□□□□ -0.56
VIPAS39-206ENST00000553888 OR8K3Q8NH51 312 aa11.53□□□□□ -0.56
VIPAS39-206ENST00000553888 CT55Q8WUE5 264 aa11.53□□□□□ -0.56
VIPAS39-206ENST00000553888 FOXN4Q96NZ1 517 aa11.53□□□□□ -0.56
VIPAS39-206ENST00000553888 TMEM185BQ9H7F4 350 aa11.53□□□□□ -0.56
VIPAS39-206ENST00000553888 TXNL4BQ9NX01 149 aaKnown RBP11.53□□□□□ -0.56
VIPAS39-206ENST00000553888 ANKRD10Q9NXR5 420 aa11.53□□□□□ -0.56
VIPAS39-206ENST00000553888 ZMIZ1Q9ULJ6 1067 aa11.53□□□□□ -0.56
VIPAS39-206ENST00000553888 GRIP1Q9Y3R0 1128 aa11.53□□□□□ -0.56
VIPAS39-206ENST00000553888 ZFHX4Q86UP3 3567 aa11.53□□□□□ -0.56
VIPAS39-206ENST00000553888 NCKAP5O14513 1909 aa11.53□□□□□ -0.56
VIPAS39-206ENST00000553888 TRAV36DV7A0A075B6V5 113 aa11.53□□□□□ -0.56
VIPAS39-206ENST00000553888 PSMD9O00233 223 aa11.53□□□□□ -0.56
VIPAS39-206ENST00000553888 GALR2O43603 387 aaPredicted RBP11.53□□□□□ -0.56
VIPAS39-206ENST00000553888 CD14P08571 375 aa11.53□□□□□ -0.56
VIPAS39-206ENST00000553888 SPI1P17947 270 aa11.53□□□□□ -0.56
VIPAS39-206ENST00000553888 OR12D2P58182 307 aa11.53□□□□□ -0.56
VIPAS39-206ENST00000553888 C17orf67Q0P5P2 114 aa11.53□□□□□ -0.56
VIPAS39-206ENST00000553888 MESTQ5EB52 335 aa11.53□□□□□ -0.56
VIPAS39-206ENST00000553888 C1orf140Q5VVS0 124 aa11.53□□□□□ -0.56
VIPAS39-206ENST00000553888 GRINAQ7Z429 371 aa11.53□□□□□ -0.56
VIPAS39-206ENST00000553888 UFD1Q92890 307 aa11.53□□□□□ -0.56
VIPAS39-206ENST00000553888 HDHD5Q9BXW7 423 aa11.53□□□□□ -0.56
VIPAS39-206ENST00000553888 BARHL1Q9BZE3 327 aa11.53□□□□□ -0.56
VIPAS39-206ENST00000553888 ZNF700Q9H0M5 742 aa11.53□□□□□ -0.56
VIPAS39-206ENST00000553888 PLGRKTQ9HBL7 147 aa11.53□□□□□ -0.56
VIPAS39-206ENST00000553888 SNTG1Q9NSN8 517 aa11.53□□□□□ -0.56
VIPAS39-206ENST00000553888 PPP4R1LQ9P1A2 415 aa11.53□□□□□ -0.56
VIPAS39-206ENST00000553888 SLC35F4A4IF30 521 aa11.52□□□□□ -0.57
VIPAS39-206ENST00000553888 H3BML4 177 aa11.52□□□□□ -0.57
VIPAS39-206ENST00000553888 EFNA2O43921 213 aa11.52□□□□□ -0.57
VIPAS39-206ENST00000553888 FBXO45P0C2W1 286 aa11.52□□□□□ -0.57
VIPAS39-206ENST00000553888 ZNF806P0C7X5 589 aa11.52□□□□□ -0.57
VIPAS39-206ENST00000553888 CBX3Q13185 183 aa11.52□□□□□ -0.57
VIPAS39-206ENST00000553888 CAMK2BQ13554 666 aa11.52□□□□□ -0.57
VIPAS39-206ENST00000553888 CRTC2Q53ET0 693 aaPredicted RBP11.52□□□□□ -0.57
VIPAS39-206ENST00000553888 PLEKHG7Q6ZR37 379 aa11.52□□□□□ -0.57
VIPAS39-206ENST00000553888 ZNF511Q8NB15 262 aa11.52□□□□□ -0.57
VIPAS39-206ENST00000553888 KBTBD8Q8NFY9 601 aa11.52□□□□□ -0.57
VIPAS39-206ENST00000553888 LIPHQ8WWY8 451 aa11.52□□□□□ -0.57
VIPAS39-206ENST00000553888 SPACA9Q96E40 222 aaPredicted RBP11.52□□□□□ -0.57
VIPAS39-206ENST00000553888 C4orf36Q96KX1 117 aa11.52□□□□□ -0.57
VIPAS39-206ENST00000553888 CDCP1Q9H5V8 836 aa11.52□□□□□ -0.57
VIPAS39-206ENST00000553888 SRA1Q9HD15 236 aaKnown RBP11.52□□□□□ -0.57
VIPAS39-206ENST00000553888 AKIP1Q9NQ31 210 aa11.52□□□□□ -0.57
VIPAS39-206ENST00000553888 AKAP7Q9P0M2 348 aaPredicted RBP11.52□□□□□ -0.57
VIPAS39-206ENST00000553888 PADI1Q9ULC6 663 aa11.52□□□□□ -0.57
VIPAS39-206ENST00000553888 PAIP2BQ9ULR5 123 aaKnown RBP11.52□□□□□ -0.57
VIPAS39-206ENST00000553888 COPS3Q9UNS2 423 aa11.52□□□□□ -0.57
VIPAS39-206ENST00000553888 MED13Q9UHV7 2174 aa11.52□□□□□ -0.57
VIPAS39-206ENST00000553888 ANKUB1A6NFN9 424 aa11.52□□□□□ -0.57
VIPAS39-206ENST00000553888 J3QLW9 94 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms