RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 HNRNPA2B1P22626 353 aaKnown RBP11.25□□□□□ -0.61
SHMT2-207ENST00000553837 HTR2AP28223 471 aa11.25□□□□□ -0.61
SHMT2-207ENST00000553837 DEFA5Q01523 94 aa11.25□□□□□ -0.61
SHMT2-207ENST00000553837 PLAURQ03405 335 aa11.25□□□□□ -0.61
SHMT2-207ENST00000553837 LGALS3BPQ08380 585 aa11.25□□□□□ -0.61
SHMT2-207ENST00000553837 FZD5Q13467 585 aa11.25□□□□□ -0.61
SHMT2-207ENST00000553837 ZNF542PQ5EBM4 170 aa11.25□□□□□ -0.61
SHMT2-207ENST00000553837 USP53Q70EK8 1073 aa11.25□□□□□ -0.61
SHMT2-207ENST00000553837 HIST3H2AQ7L7L0 130 aa11.25□□□□□ -0.61
SHMT2-207ENST00000553837 CEACAM19Q7Z692 300 aa11.25□□□□□ -0.61
SHMT2-207ENST00000553837 SLC22A18ASQ8N1D0 253 aa11.25□□□□□ -0.61
SHMT2-207ENST00000553837 OR51Q1Q8NH59 317 aa11.25□□□□□ -0.61
SHMT2-207ENST00000553837 OSTF1Q92882 214 aa11.25□□□□□ -0.61
SHMT2-207ENST00000553837 HIST1H2ACQ93077 130 aa11.25□□□□□ -0.61
SHMT2-207ENST00000553837 GSDMCQ9BYG8 508 aa11.25□□□□□ -0.61
SHMT2-207ENST00000553837 ENKD1Q9H0I2 346 aa11.25□□□□□ -0.61
SHMT2-207ENST00000553837 OR10A4Q9H209 315 aa11.25□□□□□ -0.61
SHMT2-207ENST00000553837 EVA1AQ9H8M9 152 aa11.25□□□□□ -0.61
SHMT2-207ENST00000553837 MTHFD2LQ9H903 347 aaPredicted RBP11.25□□□□□ -0.61
SHMT2-207ENST00000553837 GPN1Q9HCN4 374 aaPredicted RBP11.25□□□□□ -0.61
SHMT2-207ENST00000553837 TRIM36Q9NQ86 728 aa11.25□□□□□ -0.61
SHMT2-207ENST00000553837 GSN-AS1Q9NRJ2 163 aa11.25□□□□□ -0.61
SHMT2-207ENST00000553837 STARD5Q9NSY2 213 aa11.25□□□□□ -0.61
SHMT2-207ENST00000553837 ABRACLQ9P1F3 81 aa11.25□□□□□ -0.61
SHMT2-207ENST00000553837 FLVCR2Q9UPI3 526 aa11.25□□□□□ -0.61
SHMT2-207ENST00000553837 PEX12O00623 359 aa11.24□□□□□ -0.61
SHMT2-207ENST00000553837 HYAL3O43820 417 aaPredicted RBP11.24□□□□□ -0.61
SHMT2-207ENST00000553837 B3GALT2O43825 422 aa11.24□□□□□ -0.61
SHMT2-207ENST00000553837 NDUFS6O75380 124 aaKnown RBP11.24□□□□□ -0.61
SHMT2-207ENST00000553837 CT62P0C5K7 136 aa11.24□□□□□ -0.61
SHMT2-207ENST00000553837 ZGLP1P0C6A0 271 aa11.24□□□□□ -0.61
SHMT2-207ENST00000553837 SFTPCP11686 197 aa11.24□□□□□ -0.61
SHMT2-207ENST00000553837 FPR3P25089 353 aa11.24□□□□□ -0.61
SHMT2-207ENST00000553837 GDNFP39905 211 aa11.24□□□□□ -0.61
SHMT2-207ENST00000553837 VEGFCP49767 419 aa11.24□□□□□ -0.61
SHMT2-207ENST00000553837 CCR9P51686 369 aa11.24□□□□□ -0.61
SHMT2-207ENST00000553837 FXYD6P3P58550 94 aa11.24□□□□□ -0.61
SHMT2-207ENST00000553837 EXOSC6Q5RKV6 272 aaKnown RBP11.24□□□□□ -0.61
SHMT2-207ENST00000553837 GLDNQ6ZMI3 551 aaPredicted RBP11.24□□□□□ -0.61
SHMT2-207ENST00000553837 MBOAT2Q6ZWT7 520 aa11.24□□□□□ -0.61
SHMT2-207ENST00000553837 CXXC5Q7LFL8 322 aaKnown RBP11.24□□□□□ -0.61
SHMT2-207ENST00000553837 ZNF761Q86XN6 746 aaPredicted RBP11.24□□□□□ -0.61
SHMT2-207ENST00000553837 ACBD7Q8N6N7 88 aa11.24□□□□□ -0.61
SHMT2-207ENST00000553837 CAMKVQ8NCB2 501 aa11.24□□□□□ -0.61
SHMT2-207ENST00000553837 OR5M9Q8NGP3 310 aa11.24□□□□□ -0.61
SHMT2-207ENST00000553837 OR5W2Q8NH69 310 aa11.24□□□□□ -0.61
SHMT2-207ENST00000553837 ZDHHC1Q8WTX9 485 aa11.24□□□□□ -0.61
SHMT2-207ENST00000553837 SMIM4Q8WVI0 70 aa11.24□□□□□ -0.61
SHMT2-207ENST00000553837 THAP4Q8WY91 577 aa11.24□□□□□ -0.61
SHMT2-207ENST00000553837 SLC22A18Q96BI1 424 aa11.24□□□□□ -0.61
SHMT2-207ENST00000553837 DNTTIP1Q9H147 329 aa11.24□□□□□ -0.61
SHMT2-207ENST00000553837 ZCCHC4Q9H5U6 513 aa11.24□□□□□ -0.61
SHMT2-207ENST00000553837 FBRSQ9HAH7 460 aa11.24□□□□□ -0.61
SHMT2-207ENST00000553837 IL21RQ9HBE5 538 aa11.24□□□□□ -0.61
SHMT2-207ENST00000553837 ADAP2Q9NPF8 381 aa11.24□□□□□ -0.61
SHMT2-207ENST00000553837 CLEC4AQ9UMR7 237 aa11.24□□□□□ -0.61
SHMT2-207ENST00000553837 SIRT4Q9Y6E7 314 aaPredicted RBP11.24□□□□□ -0.61
SHMT2-207ENST00000553837 OR2M5A3KFT3 312 aa11.24□□□□□ -0.61
SHMT2-207ENST00000553837 FAM74A7A6NL05 159 aa11.24□□□□□ -0.61
SHMT2-207ENST00000553837 DUXAA6NLW8 204 aa11.24□□□□□ -0.61
SHMT2-207ENST00000553837 CHURC1-FNTBB4DL54 471 aa11.24□□□□□ -0.61
SHMT2-207ENST00000553837 HTR3BO95264 441 aa11.24□□□□□ -0.61
SHMT2-207ENST00000553837 LYPD3O95274 346 aa11.24□□□□□ -0.61
SHMT2-207ENST00000553837 HPP00738 406 aa11.24□□□□□ -0.61
SHMT2-207ENST00000553837 S100A8P05109 93 aa11.24□□□□□ -0.61
SHMT2-207ENST00000553837 RAB3BP20337 219 aa11.24□□□□□ -0.61
SHMT2-207ENST00000553837 S100PP25815 95 aa11.24□□□□□ -0.61
SHMT2-207ENST00000553837 RORAP35398 523 aa11.24□□□□□ -0.61
SHMT2-207ENST00000553837 STAT5AP42229 794 aa11.24□□□□□ -0.61
SHMT2-207ENST00000553837 AP3S2P59780 193 aa11.24□□□□□ -0.61
SHMT2-207ENST00000553837 SRSF5Q13243 272 aaKnown RBP11.24□□□□□ -0.61
SHMT2-207ENST00000553837 UBXN2BQ14CS0 331 aa11.24□□□□□ -0.61
SHMT2-207ENST00000553837 EXOSC7Q15024 291 aaKnown RBP11.24□□□□□ -0.61
SHMT2-207ENST00000553837 SWI5Q1ZZU3 235 aa11.24□□□□□ -0.61
SHMT2-207ENST00000553837 SLC25A35Q3KQZ1 300 aa11.24□□□□□ -0.61
SHMT2-207ENST00000553837 FAM74A3Q4VXF1 159 aa11.24□□□□□ -0.61
SHMT2-207ENST00000553837 ELFN2Q5R3F8 820 aa11.24□□□□□ -0.61
SHMT2-207ENST00000553837 ZC3H14Q6PJT7 736 aaKnown RBP11.24□□□□□ -0.61
SHMT2-207ENST00000553837 GSG1LQ6UXU4 331 aa11.24□□□□□ -0.61
SHMT2-207ENST00000553837 ZNF620Q6ZNG0 422 aa11.24□□□□□ -0.61
SHMT2-207ENST00000553837 DGAT2L6Q6ZPD8 337 aa11.24□□□□□ -0.61
SHMT2-207ENST00000553837 Q6ZSR6 202 aa11.24□□□□□ -0.61
SHMT2-207ENST00000553837 RAB11FIP2Q7L804 512 aa11.24□□□□□ -0.61
SHMT2-207ENST00000553837 ZAR1Q86SH2 424 aa11.24□□□□□ -0.61
SHMT2-207ENST00000553837 OR13H1Q8NG92 308 aa11.24□□□□□ -0.61
SHMT2-207ENST00000553837 OR1M1Q8NGA1 313 aa11.24□□□□□ -0.61
SHMT2-207ENST00000553837 ABHD4Q8TB40 342 aa11.24□□□□□ -0.61
SHMT2-207ENST00000553837 NSMAFQ92636 917 aa11.24□□□□□ -0.61
SHMT2-207ENST00000553837 ART5Q96L15 291 aa11.24□□□□□ -0.61
SHMT2-207ENST00000553837 SAMD8Q96LT4 415 aa11.24□□□□□ -0.61
SHMT2-207ENST00000553837 SPOCK3Q9BQ16 436 aa11.24□□□□□ -0.61
SHMT2-207ENST00000553837 NKX6-2Q9C056 277 aaPredicted RBP11.24□□□□□ -0.61
SHMT2-207ENST00000553837 ANKRD19PQ9H560 264 aa11.24□□□□□ -0.61
SHMT2-207ENST00000553837 HRASLSQ9HDD0 168 aa11.24□□□□□ -0.61
SHMT2-207ENST00000553837 KLHL1Q9NR64 748 aa11.24□□□□□ -0.61
SHMT2-207ENST00000553837 KLHL28Q9NXS3 571 aa11.24□□□□□ -0.61
SHMT2-207ENST00000553837 ZNF69Q9UC07 566 aa11.24□□□□□ -0.61
SHMT2-207ENST00000553837 C19orf53Q9UNZ5 99 aaPredicted RBP11.24□□□□□ -0.61
SHMT2-207ENST00000553837 SLC6A5Q9Y345 797 aa11.24□□□□□ -0.61
SHMT2-207ENST00000553837 PIAS3Q9Y6X2 628 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms