RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 RIT1Q92963 219 aa6.33□□□□□ -1.4
LINC-ROR-201ENST00000553704 DNAJA3Q96EY1 480 aa6.33□□□□□ -1.4
LINC-ROR-201ENST00000553704 MOGAT1Q96PD6 335 aa6.33□□□□□ -1.4
LINC-ROR-201ENST00000553704 CCDC3Q9BQI4 270 aa6.33□□□□□ -1.4
LINC-ROR-201ENST00000553704 OR10A4Q9H209 315 aa6.33□□□□□ -1.4
LINC-ROR-201ENST00000553704 NARFLQ9H6Q4 476 aa6.33□□□□□ -1.4
LINC-ROR-201ENST00000553704 RANBP3Q9H6Z4 567 aaPredicted RBP6.33□□□□□ -1.4
LINC-ROR-201ENST00000553704 METTL17Q9H7H0 456 aaPredicted RBP6.33□□□□□ -1.4
LINC-ROR-201ENST00000553704 LIN7BQ9HAP6 207 aa6.33□□□□□ -1.4
LINC-ROR-201ENST00000553704 MKKSQ9NPJ1 570 aaPredicted RBP6.33□□□□□ -1.4
LINC-ROR-201ENST00000553704 CA10Q9NS85 328 aa6.33□□□□□ -1.4
LINC-ROR-201ENST00000553704 RPS6KB2Q9UBS0 482 aa6.33□□□□□ -1.4
LINC-ROR-201ENST00000553704 ERVK-19Q9WJR5 959 aa6.33□□□□□ -1.4
LINC-ROR-201ENST00000553704 SLCO1B1Q9Y6L6 691 aa6.33□□□□□ -1.4
LINC-ROR-201ENST00000553704 LAMA1P25391 3075 aa6.33□□□□□ -1.4
LINC-ROR-201ENST00000553704 ZSCAN5BA6NJL1 495 aa6.32□□□□□ -1.4
LINC-ROR-201ENST00000553704 ZNF879B4DU55 563 aa6.32□□□□□ -1.4
LINC-ROR-201ENST00000553704 AIPO00170 330 aa6.32□□□□□ -1.4
LINC-ROR-201ENST00000553704 ARPC1BO15143 372 aaKnown RBP6.32□□□□□ -1.4
LINC-ROR-201ENST00000553704 CTDSPLO15194 276 aa6.32□□□□□ -1.4
LINC-ROR-201ENST00000553704 GATBO75879 557 aaKnown RBP6.32□□□□□ -1.4
LINC-ROR-201ENST00000553704 OR7A10O76100 309 aa6.32□□□□□ -1.4
LINC-ROR-201ENST00000553704 GPANK1O95872 356 aa6.32□□□□□ -1.4
LINC-ROR-201ENST00000553704 CSTAP01040 98 aa6.32□□□□□ -1.4
LINC-ROR-201ENST00000553704 HRGP04196 525 aa6.32□□□□□ -1.4
LINC-ROR-201ENST00000553704 MST1P26927 711 aa6.32□□□□□ -1.4
LINC-ROR-201ENST00000553704 DCTDP32321 178 aa6.32□□□□□ -1.4
LINC-ROR-201ENST00000553704 AQP2P41181 271 aa6.32□□□□□ -1.4
LINC-ROR-201ENST00000553704 RAD52P43351 418 aa6.32□□□□□ -1.4
LINC-ROR-201ENST00000553704 SOX2P48431 317 aa6.32□□□□□ -1.4
LINC-ROR-201ENST00000553704 GAS6Q14393 721 aa6.32□□□□□ -1.4
LINC-ROR-201ENST00000553704 ZNF267Q14586 743 aaPredicted RBP6.32□□□□□ -1.4
LINC-ROR-201ENST00000553704 CD226Q15762 336 aa6.32□□□□□ -1.4
LINC-ROR-201ENST00000553704 PWWP2BQ6NUJ5 590 aa6.32□□□□□ -1.4
LINC-ROR-201ENST00000553704 Q6ZSR6 202 aa6.32□□□□□ -1.4
LINC-ROR-201ENST00000553704 KANSL1Q7Z3B3 1105 aa6.32□□□□□ -1.4
LINC-ROR-201ENST00000553704 FGD2Q7Z6J4 655 aa6.32□□□□□ -1.4
LINC-ROR-201ENST00000553704 LUZP2Q86TE4 346 aa6.32□□□□□ -1.4
LINC-ROR-201ENST00000553704 CCDC28AQ8IWP9 274 aa6.32□□□□□ -1.4
LINC-ROR-201ENST00000553704 SLC38A6Q8IZM9 456 aa6.32□□□□□ -1.4
LINC-ROR-201ENST00000553704 BCORP1Q8N888 145 aa6.32□□□□□ -1.4
LINC-ROR-201ENST00000553704 OR2T35Q8NGX2 323 aa6.32□□□□□ -1.4
LINC-ROR-201ENST00000553704 OR10AC1Q8NH08 325 aa6.32□□□□□ -1.4
LINC-ROR-201ENST00000553704 OR56B4Q8NH76 319 aa6.32□□□□□ -1.4
LINC-ROR-201ENST00000553704 C16orf52Q8NHV5 167 aa6.32□□□□□ -1.4
LINC-ROR-201ENST00000553704 MED30Q96HR3 178 aa6.32□□□□□ -1.4
LINC-ROR-201ENST00000553704 SORCS2Q96PQ0 1159 aa6.32□□□□□ -1.4
LINC-ROR-201ENST00000553704 MFRPQ9BY79 579 aa6.32□□□□□ -1.4
LINC-ROR-201ENST00000553704 SPRTNQ9H040 489 aaPredicted RBP6.32□□□□□ -1.4
LINC-ROR-201ENST00000553704 PLEKHA1Q9HB21 404 aa6.32□□□□□ -1.4
LINC-ROR-201ENST00000553704 COPZ2Q9P299 210 aa6.32□□□□□ -1.4
LINC-ROR-201ENST00000553704 EIF3KQ9UBQ5 218 aaKnown RBP6.32□□□□□ -1.4
LINC-ROR-201ENST00000553704 OR5V1Q9UGF6 321 aa6.32□□□□□ -1.4
LINC-ROR-201ENST00000553704 NPTNQ9Y639 398 aa6.32□□□□□ -1.4
LINC-ROR-201ENST00000553704 AUP1Q9Y679 476 aa6.32□□□□□ -1.4
LINC-ROR-201ENST00000553704 CACNA1IQ9P0X4 2223 aa6.32□□□□□ -1.4
LINC-ROR-201ENST00000553704 TMEM72A0PK05 275 aa6.32□□□□□ -1.4
LINC-ROR-201ENST00000553704 LINC00862A6NCI5 91 aa6.32□□□□□ -1.4
LINC-ROR-201ENST00000553704 TVP23AA6NH52 213 aa6.32□□□□□ -1.4
LINC-ROR-201ENST00000553704 KHNYNO15037 678 aaKnown RBP6.32□□□□□ -1.4
LINC-ROR-201ENST00000553704 CLPSP04118 112 aa6.32□□□□□ -1.4
LINC-ROR-201ENST00000553704 CTHP32929 405 aa6.32□□□□□ -1.4
LINC-ROR-201ENST00000553704 CAPZA2P47755 286 aa6.32□□□□□ -1.4
LINC-ROR-201ENST00000553704 P2RX1P51575 399 aa6.32□□□□□ -1.4
LINC-ROR-201ENST00000553704 TPMTP51580 245 aa6.32□□□□□ -1.4
LINC-ROR-201ENST00000553704 ILF3Q12906 894 aaKnown RBP eCLIP6.32□□□□□ -1.4
LINC-ROR-201ENST00000553704 C1orf61Q13536 156 aa6.32□□□□□ -1.4
LINC-ROR-201ENST00000553704 DYRK1AQ13627 763 aa6.32□□□□□ -1.4
LINC-ROR-201ENST00000553704 KCNAB1Q14722 419 aa6.32□□□□□ -1.4
LINC-ROR-201ENST00000553704 ZNHIT3Q15649 155 aaPredicted RBP6.32□□□□□ -1.4
LINC-ROR-201ENST00000553704 DPY19L2P2Q6ZN68 376 aa6.32□□□□□ -1.4
LINC-ROR-201ENST00000553704 FAM122BQ7Z309 247 aa6.32□□□□□ -1.4
LINC-ROR-201ENST00000553704 ZNF550Q7Z398 422 aa6.32□□□□□ -1.4
LINC-ROR-201ENST00000553704 EXD3Q8N9H8 876 aa6.32□□□□□ -1.4
LINC-ROR-201ENST00000553704 ZSCAN1Q8NBB4 408 aa6.32□□□□□ -1.4
LINC-ROR-201ENST00000553704 LSM14AQ8ND56 463 aaKnown RBP6.32□□□□□ -1.4
LINC-ROR-201ENST00000553704 ASB12Q8WXK4 309 aa6.32□□□□□ -1.4
LINC-ROR-201ENST00000553704 RBP7Q96R05 134 aa6.32□□□□□ -1.4
LINC-ROR-201ENST00000553704 NKX3-1Q99801 234 aaPredicted RBP6.32□□□□□ -1.4
LINC-ROR-201ENST00000553704 C7orf50Q9BRJ6 194 aaKnown RBP6.32□□□□□ -1.4
LINC-ROR-201ENST00000553704 ALG12Q9BV10 488 aa6.32□□□□□ -1.4
LINC-ROR-201ENST00000553704 CHIAQ9BZP6 476 aa6.32□□□□□ -1.4
LINC-ROR-201ENST00000553704 SEMA4CQ9C0C4 833 aa6.32□□□□□ -1.4
LINC-ROR-201ENST00000553704 ZNF436Q9C0F3 470 aaPredicted RBP6.32□□□□□ -1.4
LINC-ROR-201ENST00000553704 LMAN2LQ9H0V9 348 aa6.32□□□□□ -1.4
LINC-ROR-201ENST00000553704 KCNK15Q9H427 330 aa6.32□□□□□ -1.4
LINC-ROR-201ENST00000553704 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.32□□□□□ -1.4
LINC-ROR-201ENST00000553704 MRPL39Q9NYK5 338 aaKnown RBP6.32□□□□□ -1.4
LINC-ROR-201ENST00000553704 MRM2Q9UI43 246 aaKnown RBP6.32□□□□□ -1.4
LINC-ROR-201ENST00000553704 ING1Q9UK53 422 aaPredicted RBP6.32□□□□□ -1.4
LINC-ROR-201ENST00000553704 FOXJ3Q9UPW0 622 aa6.32□□□□□ -1.4
LINC-ROR-201ENST00000553704 RNF215Q9Y6U7 377 aa6.32□□□□□ -1.4
LINC-ROR-201ENST00000553704 THADAQ6YHU6 1953 aa6.32□□□□□ -1.4
LINC-ROR-201ENST00000553704 TRAV8-7A0A075B6U6 113 aa6.31□□□□□ -1.4
LINC-ROR-201ENST00000553704 OR5K3A6NET4 321 aa6.31□□□□□ -1.4
LINC-ROR-201ENST00000553704 SERINC4A6NH21 518 aa6.31□□□□□ -1.4
LINC-ROR-201ENST00000553704 H0YC42 278 aa6.31□□□□□ -1.4
LINC-ROR-201ENST00000553704 BLOC1S5-TXNDC5H3BN57 136 aa6.31□□□□□ -1.4
LINC-ROR-201ENST00000553704 ZNF749O43361 778 aa6.31□□□□□ -1.4
LINC-ROR-201ENST00000553704 UPK3AO75631 287 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms