RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 UEVLDQ8IX04 471 aa12.31□□□□□ -0.44
TUBB3-202ENST00000553656 ADGRG5Q8IZF4 528 aa12.31□□□□□ -0.44
TUBB3-202ENST00000553656 OR52J3Q8NH60 311 aa12.31□□□□□ -0.44
TUBB3-202ENST00000553656 RNASE6Q93091 150 aaKnown RBP12.31□□□□□ -0.44
TUBB3-202ENST00000553656 ZNF775Q96BV0 537 aaPredicted RBP12.31□□□□□ -0.44
TUBB3-202ENST00000553656 BPIFA2Q96DR5 249 aa12.31□□□□□ -0.44
TUBB3-202ENST00000553656 DHRS1Q96LJ7 313 aa12.31□□□□□ -0.44
TUBB3-202ENST00000553656 OXGR1Q96P68 337 aa12.31□□□□□ -0.44
TUBB3-202ENST00000553656 RBM24Q9BX46 236 aaKnown RBP12.31□□□□□ -0.44
TUBB3-202ENST00000553656 OPN3Q9H1Y3 402 aaPredicted RBP12.31□□□□□ -0.44
TUBB3-202ENST00000553656 PLSCR4Q9NRQ2 329 aa12.31□□□□□ -0.44
TUBB3-202ENST00000553656 PARPBPQ9NWS1 579 aa12.31□□□□□ -0.44
TUBB3-202ENST00000553656 SEC14L4Q9UDX3 406 aa12.31□□□□□ -0.44
TUBB3-202ENST00000553656 ING1Q9UK53 422 aaPredicted RBP12.31□□□□□ -0.44
TUBB3-202ENST00000553656 TMCC3Q9ULS5 477 aa12.31□□□□□ -0.44
TUBB3-202ENST00000553656 FLNCQ14315 2725 aa12.3□□□□□ -0.44
TUBB3-202ENST00000553656 A0A087WUU8 490 aa12.3□□□□□ -0.44
TUBB3-202ENST00000553656 A8MXE2 369 aa12.3□□□□□ -0.44
TUBB3-202ENST00000553656 EFCAB9A8MZ26 197 aa12.3□□□□□ -0.44
TUBB3-202ENST00000553656 PIP5K1CO60331 668 aa12.3□□□□□ -0.44
TUBB3-202ENST00000553656 CLDN1O95832 211 aa12.3□□□□□ -0.44
TUBB3-202ENST00000553656 ADORA3P0DMS8 318 aa12.3□□□□□ -0.44
TUBB3-202ENST00000553656 SAGP10523 405 aaPredicted RBP12.3□□□□□ -0.44
TUBB3-202ENST00000553656 FUT1P19526 365 aa12.3□□□□□ -0.44
TUBB3-202ENST00000553656 IFNGR2P38484 337 aa12.3□□□□□ -0.44
TUBB3-202ENST00000553656 MAGEA2P43356 314 aa12.3□□□□□ -0.44
TUBB3-202ENST00000553656 ERFP50548 548 aa12.3□□□□□ -0.44
TUBB3-202ENST00000553656 P2RY4P51582 365 aa12.3□□□□□ -0.44
TUBB3-202ENST00000553656 LTBQ06643 244 aa12.3□□□□□ -0.44
TUBB3-202ENST00000553656 PUDPQ08623 228 aa12.3□□□□□ -0.44
TUBB3-202ENST00000553656 POU4F3Q15319 338 aa12.3□□□□□ -0.44
TUBB3-202ENST00000553656 EXOC3L2Q2M3D2 409 aa12.3□□□□□ -0.44
TUBB3-202ENST00000553656 FBXL19-AS1Q494R0 122 aa12.3□□□□□ -0.44
TUBB3-202ENST00000553656 BEND4Q6ZU67 534 aa12.3□□□□□ -0.44
TUBB3-202ENST00000553656 NUFIP2Q7Z417 695 aaKnown RBP12.3□□□□□ -0.44
TUBB3-202ENST00000553656 YTHDF3Q7Z739 585 aaKnown RBP12.3□□□□□ -0.44
TUBB3-202ENST00000553656 KIF18BQ86Y91 864 aa12.3□□□□□ -0.44
TUBB3-202ENST00000553656 KDM8Q8N371 416 aa12.3□□□□□ -0.44
TUBB3-202ENST00000553656 ZNF610Q8N9Z0 462 aa12.3□□□□□ -0.44
TUBB3-202ENST00000553656 SLC7A13Q8TCU3 470 aa12.3□□□□□ -0.44
TUBB3-202ENST00000553656 CANT1Q8WVQ1 401 aa12.3□□□□□ -0.44
TUBB3-202ENST00000553656 APH1AQ96BI3 265 aa12.3□□□□□ -0.44
TUBB3-202ENST00000553656 PSMG3-AS1Q96PY0 264 aa12.3□□□□□ -0.44
TUBB3-202ENST00000553656 RAB3IPQ96QF0 476 aaPredicted RBP12.3□□□□□ -0.44
TUBB3-202ENST00000553656 ALPK1Q96QP1 1244 aa12.3□□□□□ -0.44
TUBB3-202ENST00000553656 CHID1Q9BWS9 393 aa12.3□□□□□ -0.44
TUBB3-202ENST00000553656 NDEL1Q9GZM8 345 aa12.3□□□□□ -0.44
TUBB3-202ENST00000553656 REEP1Q9H902 201 aa12.3□□□□□ -0.44
TUBB3-202ENST00000553656 C20orf141Q9NUB4 165 aa12.3□□□□□ -0.44
TUBB3-202ENST00000553656 JKAMPQ9P055 326 aa12.3□□□□□ -0.44
TUBB3-202ENST00000553656 FLVCR1Q9Y5Y0 555 aa12.3□□□□□ -0.44
TUBB3-202ENST00000553656 DOPEY1Q5JWR5 2465 aa12.3□□□□□ -0.44
TUBB3-202ENST00000553656 TENM4Q6N022 2769 aa12.3□□□□□ -0.44
TUBB3-202ENST00000553656 USP9XQ93008 2570 aaPredicted RBP12.29□□□□□ -0.44
TUBB3-202ENST00000553656 TRBV4-1A0A0J9YWV2 114 aa12.29□□□□□ -0.44
TUBB3-202ENST00000553656 TCRBV3S1A0A5B6 114 aa12.29□□□□□ -0.44
TUBB3-202ENST00000553656 TNFRSF11BO00300 401 aa12.29□□□□□ -0.44
TUBB3-202ENST00000553656 PLPP3O14495 311 aa12.29□□□□□ -0.44
TUBB3-202ENST00000553656 GNGT2O14610 69 aa12.29□□□□□ -0.44
TUBB3-202ENST00000553656 CGAP01215 116 aa12.29□□□□□ -0.44
TUBB3-202ENST00000553656 ASAH2BP0C7U1 165 aa12.29□□□□□ -0.44
TUBB3-202ENST00000553656 POU2F1P14859 743 aa12.29□□□□□ -0.44
TUBB3-202ENST00000553656 PEX19P40855 299 aa12.29□□□□□ -0.44
TUBB3-202ENST00000553656 OR3A2P47893 321 aa12.29□□□□□ -0.44
TUBB3-202ENST00000553656 PRKCDQ05655 676 aa12.29□□□□□ -0.44
TUBB3-202ENST00000553656 TAF11Q15544 211 aa12.29□□□□□ -0.44
TUBB3-202ENST00000553656 IQCCQ4KMZ1 466 aa12.29□□□□□ -0.44
TUBB3-202ENST00000553656 OR2T5Q6IEZ7 315 aa12.29□□□□□ -0.44
TUBB3-202ENST00000553656 TFAP2EQ6VUC0 442 aa12.29□□□□□ -0.44
TUBB3-202ENST00000553656 CREB3L2Q70SY1 520 aa12.29□□□□□ -0.44
TUBB3-202ENST00000553656 AAED1Q7RTV5 226 aa12.29□□□□□ -0.44
TUBB3-202ENST00000553656 SLC46A3Q7Z3Q1 461 aa12.29□□□□□ -0.44
TUBB3-202ENST00000553656 UBE2J2Q8N2K1 259 aa12.29□□□□□ -0.44
TUBB3-202ENST00000553656 LRRC17Q8N6Y2 441 aa12.29□□□□□ -0.44
TUBB3-202ENST00000553656 ANKK1Q8NFD2 765 aa12.29□□□□□ -0.44
TUBB3-202ENST00000553656 OR4K5Q8NGD3 323 aa12.29□□□□□ -0.44
TUBB3-202ENST00000553656 OR2T29Q8NH02 315 aa12.29□□□□□ -0.44
TUBB3-202ENST00000553656 TMEM45BQ96B21 275 aa12.29□□□□□ -0.44
TUBB3-202ENST00000553656 GALNT8Q9NY28 637 aa12.29□□□□□ -0.44
TUBB3-202ENST00000553656 ELOVL5Q9NYP7 299 aa12.29□□□□□ -0.44
TUBB3-202ENST00000553656 PLEKHB1Q9UF11 243 aaPredicted RBP12.29□□□□□ -0.44
TUBB3-202ENST00000553656 SAMHD1Q9Y3Z3 626 aaKnown RBP12.29□□□□□ -0.44
TUBB3-202ENST00000553656 NOX1Q9Y5S8 564 aa12.29□□□□□ -0.44
TUBB3-202ENST00000553656 INTS1Q8N201 2190 aaKnown RBP12.29□□□□□ -0.44
TUBB3-202ENST00000553656 LRRK2Q5S007 2527 aa12.28□□□□□ -0.44
TUBB3-202ENST00000553656 LOC102725191A0A1B0GVB3 256 aa12.28□□□□□ -0.44
TUBB3-202ENST00000553656 SH3PXD2BA1X283 911 aa12.28□□□□□ -0.44
TUBB3-202ENST00000553656 C11orf98E9PRG8 122 aa12.28□□□□□ -0.44
TUBB3-202ENST00000553656 BLOC1S5-TXNDC5H3BN57 136 aa12.28□□□□□ -0.44
TUBB3-202ENST00000553656 RNF13O43567 381 aa12.28□□□□□ -0.44
TUBB3-202ENST00000553656 OR10H3O60404 316 aa12.28□□□□□ -0.44
TUBB3-202ENST00000553656 SERPINI2O75830 405 aa12.28□□□□□ -0.44
TUBB3-202ENST00000553656 KRT33AO76009 404 aa12.28□□□□□ -0.44
TUBB3-202ENST00000553656 CST1P01037 141 aa12.28□□□□□ -0.44
TUBB3-202ENST00000553656 FUT4P22083 530 aa12.28□□□□□ -0.44
TUBB3-202ENST00000553656 GPR4P46093 362 aa12.28□□□□□ -0.44
TUBB3-202ENST00000553656 CLDN17P56750 224 aa12.28□□□□□ -0.44
TUBB3-202ENST00000553656 POU3F1Q03052 451 aaPredicted RBP12.28□□□□□ -0.44
TUBB3-202ENST00000553656 TBPL2Q6SJ96 375 aa12.28□□□□□ -0.44
TUBB3-202ENST00000553656 PXKQ7Z7A4 578 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms