RNA–Protein interactions for RNA: ENST00000553340.1

SYNE3-202, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

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Gene SYNE3, Length 2,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-202ENST00000553340 LYRM4Q9HD34 91 aa16.07■□□□□ 0.16
SYNE3-202ENST00000553340 ETV7Q9Y603 341 aa16.07■□□□□ 0.16
SYNE3-202ENST00000553340 CTSVO60911 334 aa16.07■□□□□ 0.16
SYNE3-202ENST00000553340 CTNNB1P35222 781 aa16.07■□□□□ 0.16
SYNE3-202ENST00000553340 FAUP35544 74 aaKnown RBP16.07■□□□□ 0.16
SYNE3-202ENST00000553340 RPS15P62841 145 aaKnown RBP16.07■□□□□ 0.16
SYNE3-202ENST00000553340 RPS21P63220 83 aaKnown RBP16.07■□□□□ 0.16
SYNE3-202ENST00000553340 HTRA4P83105 476 aaPredicted RBP16.07■□□□□ 0.16
SYNE3-202ENST00000553340 STPG1Q5TH74 334 aa16.07■□□□□ 0.16
SYNE3-202ENST00000553340 STAC2Q6ZMT1 411 aa16.07■□□□□ 0.16
SYNE3-202ENST00000553340 DPY19L2P2Q6ZN68 376 aa16.07■□□□□ 0.16
SYNE3-202ENST00000553340 TMUB2Q71RG4 321 aa16.07■□□□□ 0.16
SYNE3-202ENST00000553340 PNPLA2Q96AD5 504 aa16.07■□□□□ 0.16
SYNE3-202ENST00000553340 CAPNS2Q96L46 248 aa16.07■□□□□ 0.16
SYNE3-202ENST00000553340 GINS4Q9BRT9 223 aa16.07■□□□□ 0.16
SYNE3-202ENST00000553340 RSPH9Q9H1X1 276 aaPredicted RBP16.07■□□□□ 0.16
SYNE3-202ENST00000553340 DNAJB12Q9NXW2 375 aaKnown RBP16.07■□□□□ 0.16
SYNE3-202ENST00000553340 WSB2Q9NYS7 404 aaPredicted RBP16.07■□□□□ 0.16
SYNE3-202ENST00000553340 GLS2Q9UI32 602 aa16.07■□□□□ 0.16
SYNE3-202ENST00000553340 A8MXK9 166 aa16.06■□□□□ 0.16
SYNE3-202ENST00000553340 CT62P0C5K7 136 aa16.06■□□□□ 0.16
SYNE3-202ENST00000553340 PPP3CBP16298 524 aa16.06■□□□□ 0.16
SYNE3-202ENST00000553340 C5AR1P21730 350 aa16.06■□□□□ 0.16
SYNE3-202ENST00000553340 IL10RAQ13651 578 aa16.06■□□□□ 0.16
SYNE3-202ENST00000553340 NDUFAF6Q330K2 333 aa16.06■□□□□ 0.16
SYNE3-202ENST00000553340 NAXDQ8IW45 347 aa16.06■□□□□ 0.16
SYNE3-202ENST00000553340 CAMKVQ8NCB2 501 aa16.06■□□□□ 0.16
SYNE3-202ENST00000553340 OR52B4Q8NGK2 314 aa16.06■□□□□ 0.16
SYNE3-202ENST00000553340 TSPAN10Q9H1Z9 355 aaPredicted RBP16.06■□□□□ 0.16
SYNE3-202ENST00000553340 MED11Q9P086 117 aa16.06■□□□□ 0.16
SYNE3-202ENST00000553340 TBC1D29Q9UFV1 150 aa16.06■□□□□ 0.16
SYNE3-202ENST00000553340 OPN4Q9UHM6 478 aa16.06■□□□□ 0.16
SYNE3-202ENST00000553340 PTPRSQ13332 1948 aa16.06■□□□□ 0.16
SYNE3-202ENST00000553340 OR6C68A6NDL8 312 aa16.06■□□□□ 0.16
SYNE3-202ENST00000553340 POM121CA8CG34 1229 aa16.06■□□□□ 0.16
SYNE3-202ENST00000553340 PYCARD-AS1I3L0S3 204 aa16.06■□□□□ 0.16
SYNE3-202ENST00000553340 NKX2-2O95096 273 aa16.06■□□□□ 0.16
SYNE3-202ENST00000553340 CALCRP30988 508 aa16.06■□□□□ 0.16
SYNE3-202ENST00000553340 IGFALSP35858 605 aa16.06■□□□□ 0.16
SYNE3-202ENST00000553340 ZC3H14Q6PJT7 736 aaKnown RBP16.06■□□□□ 0.16
SYNE3-202ENST00000553340 APOOQ9BUR5 198 aa16.06■□□□□ 0.16
SYNE3-202ENST00000553340 ARL6Q9H0F7 186 aa16.06■□□□□ 0.16
SYNE3-202ENST00000553340 CTNSO60931 367 aa16.05■□□□□ 0.16
SYNE3-202ENST00000553340 ADH1BP00325 375 aa16.05■□□□□ 0.16
SYNE3-202ENST00000553340 LPLP06858 475 aa16.05■□□□□ 0.16
SYNE3-202ENST00000553340 MAPK3P27361 379 aaPredicted RBP16.05■□□□□ 0.16
SYNE3-202ENST00000553340 GRPRP30550 384 aa16.05■□□□□ 0.16
SYNE3-202ENST00000553340 MGAT2Q10469 447 aa16.05■□□□□ 0.16
SYNE3-202ENST00000553340 RBMS2Q15434 407 aaKnown RBP16.05■□□□□ 0.16
SYNE3-202ENST00000553340 TCEA2Q15560 299 aa16.05■□□□□ 0.16
SYNE3-202ENST00000553340 Q499Y3 187 aa16.05■□□□□ 0.16
SYNE3-202ENST00000553340 C1orf53Q5VUE5 145 aa16.05■□□□□ 0.16
SYNE3-202ENST00000553340 SLC6A19Q695T7 634 aa16.05■□□□□ 0.16
SYNE3-202ENST00000553340 PSRC1Q6PGN9 363 aaPredicted RBP16.05■□□□□ 0.16
SYNE3-202ENST00000553340 DND1Q8IYX4 353 aaKnown RBP16.05■□□□□ 0.16
SYNE3-202ENST00000553340 TMEM52Q8NDY8 209 aa16.05■□□□□ 0.16
SYNE3-202ENST00000553340 SPPL3Q8TCT6 385 aa16.05■□□□□ 0.16
SYNE3-202ENST00000553340 SLC17A9Q9BYT1 436 aa16.05■□□□□ 0.16
SYNE3-202ENST00000553340 A0A1B0GVT2 93 aa16.05■□□□□ 0.16
SYNE3-202ENST00000553340 ATP6V1G2-DDX39BF2Z307 99 aa16.05■□□□□ 0.16
SYNE3-202ENST00000553340 IMPA2O14732 288 aa16.05■□□□□ 0.16
SYNE3-202ENST00000553340 ARPC3O15145 178 aa16.05■□□□□ 0.16
SYNE3-202ENST00000553340 RBBP9O75884 186 aa16.05■□□□□ 0.16
SYNE3-202ENST00000553340 TPPPO94811 219 aa16.05■□□□□ 0.16
SYNE3-202ENST00000553340 EML2O95834 649 aa16.05■□□□□ 0.16
SYNE3-202ENST00000553340 TACSTD2P09758 323 aa16.05■□□□□ 0.16
SYNE3-202ENST00000553340 GABRA1P14867 456 aa16.05■□□□□ 0.16
SYNE3-202ENST00000553340 MNX1P50219 401 aaPredicted RBP16.05■□□□□ 0.16
SYNE3-202ENST00000553340 GPR143P51810 404 aa16.05■□□□□ 0.16
SYNE3-202ENST00000553340 KIRREL2Q6UWL6 708 aa16.05■□□□□ 0.16
SYNE3-202ENST00000553340 GLB1L2Q8IW92 636 aa16.05■□□□□ 0.16
SYNE3-202ENST00000553340 TOE1Q96GM8 510 aaKnown RBP16.05■□□□□ 0.16
SYNE3-202ENST00000553340 OR1F2PQ96R84 312 aa16.05■□□□□ 0.16
SYNE3-202ENST00000553340 NMNAT2Q9BZQ4 307 aa16.05■□□□□ 0.16
SYNE3-202ENST00000553340 LMAN2LQ9H0V9 348 aa16.05■□□□□ 0.16
SYNE3-202ENST00000553340 FGF22Q9HCT0 170 aa16.05■□□□□ 0.16
SYNE3-202ENST00000553340 A0A1W2PQU0 124 aa16.04■□□□□ 0.16
SYNE3-202ENST00000553340 GLCEO94923 617 aa16.04■□□□□ 0.16
SYNE3-202ENST00000553340 GLSO94925 669 aaPredicted RBP16.04■□□□□ 0.16
SYNE3-202ENST00000553340 TIMP1P01033 207 aa16.04■□□□□ 0.16
SYNE3-202ENST00000553340 VSIG10L2P0DP72 767 aa16.04■□□□□ 0.16
SYNE3-202ENST00000553340 GK2Q14410 553 aaPredicted RBP16.04■□□□□ 0.16
SYNE3-202ENST00000553340 KIR2DS3Q14952 304 aa16.04■□□□□ 0.16
SYNE3-202ENST00000553340 LRRN1Q6UXK5 716 aa16.04■□□□□ 0.16
SYNE3-202ENST00000553340 GSG1LQ6UXU4 331 aa16.04■□□□□ 0.16
SYNE3-202ENST00000553340 ZNF550Q7Z398 422 aa16.04■□□□□ 0.16
SYNE3-202ENST00000553340 FAM220AQ7Z4H9 259 aa16.04■□□□□ 0.16
SYNE3-202ENST00000553340 SHISA5Q8N114 240 aa16.04■□□□□ 0.16
SYNE3-202ENST00000553340 ESX1Q8N693 406 aa16.04■□□□□ 0.16
SYNE3-202ENST00000553340 OR5M1Q8NGP8 315 aa16.04■□□□□ 0.16
SYNE3-202ENST00000553340 ZPLD1Q8TCW7 415 aa16.04■□□□□ 0.16
SYNE3-202ENST00000553340 OR2M4Q96R27 311 aa16.04■□□□□ 0.16
SYNE3-202ENST00000553340 RXFP3Q9NSD7 469 aa16.04■□□□□ 0.16
SYNE3-202ENST00000553340 MRPS2Q9Y399 296 aaKnown RBP16.04■□□□□ 0.16
SYNE3-202ENST00000553340 FXYD6-FXYD2A0A087WZ82 144 aa16.04■□□□□ 0.16
SYNE3-202ENST00000553340 SLC22A23A1A5C7 686 aa16.04■□□□□ 0.16
SYNE3-202ENST00000553340 FKTNO75072 461 aa16.04■□□□□ 0.16
SYNE3-202ENST00000553340 RPP14O95059 124 aaKnown RBP16.04■□□□□ 0.16
SYNE3-202ENST00000553340 KAT7O95251 611 aa16.04■□□□□ 0.16
SYNE3-202ENST00000553340 PROS1P07225 676 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms