RNA–Protein interactions for RNA: ENST00000553300.5

HNRNPC-205, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-205ENST00000553300 GID8Q9NWU2 228 aa11.56□□□□□ -0.56
HNRNPC-205ENST00000553300 LAMP3Q9UQV4 416 aa11.56□□□□□ -0.56
HNRNPC-205ENST00000553300 RCE1Q9Y256 329 aa11.56□□□□□ -0.56
HNRNPC-205ENST00000553300 HEATR1Q9H583 2144 aaKnown RBP11.56□□□□□ -0.56
HNRNPC-205ENST00000553300 NIPBLQ6KC79 2804 aaeCLIP11.55□□□□□ -0.56
HNRNPC-205ENST00000553300 ZNF587BE7ETH6 402 aa11.55□□□□□ -0.56
HNRNPC-205ENST00000553300 ABCD4O14678 606 aa11.55□□□□□ -0.56
HNRNPC-205ENST00000553300 WNT11O96014 354 aa11.55□□□□□ -0.56
HNRNPC-205ENST00000553300 PTH2RP49190 550 aa11.55□□□□□ -0.56
HNRNPC-205ENST00000553300 GZMMP51124 257 aa11.55□□□□□ -0.56
HNRNPC-205ENST00000553300 CDH12P55289 794 aa11.55□□□□□ -0.56
HNRNPC-205ENST00000553300 PRPS1P60891 318 aa11.55□□□□□ -0.56
HNRNPC-205ENST00000553300 RPS4XP62701 263 aaKnown RBP11.55□□□□□ -0.56
HNRNPC-205ENST00000553300 VEZF1Q14119 521 aa11.55□□□□□ -0.56
HNRNPC-205ENST00000553300 NRF1Q16656 503 aa11.55□□□□□ -0.56
HNRNPC-205ENST00000553300 CGB2Q6NT52 195 aa11.55□□□□□ -0.56
HNRNPC-205ENST00000553300 KLHL24Q6TFL4 600 aa11.55□□□□□ -0.56
HNRNPC-205ENST00000553300 BIVMQ86UB2 503 aa11.55□□□□□ -0.56
HNRNPC-205ENST00000553300 KRTAP1-3Q8IUG1 177 aa11.55□□□□□ -0.56
HNRNPC-205ENST00000553300 SCAIQ8N9R8 606 aa11.55□□□□□ -0.56
HNRNPC-205ENST00000553300 RNF217Q8TC41 542 aa11.55□□□□□ -0.56
HNRNPC-205ENST00000553300 TRMT61AQ96FX7 289 aaKnown RBP11.55□□□□□ -0.56
HNRNPC-205ENST00000553300 PERPQ96FX8 193 aa11.55□□□□□ -0.56
HNRNPC-205ENST00000553300 MCHR1Q99705 422 aa11.55□□□□□ -0.56
HNRNPC-205ENST00000553300 ARHGDIGQ99819 225 aa11.55□□□□□ -0.56
HNRNPC-205ENST00000553300 BDH2Q9BUT1 245 aa11.55□□□□□ -0.56
HNRNPC-205ENST00000553300 PRR14Q9BWN1 585 aa11.55□□□□□ -0.56
HNRNPC-205ENST00000553300 LINC00470Q9BZP3 86 aa11.55□□□□□ -0.56
HNRNPC-205ENST00000553300 GRIP2Q9C0E4 1043 aa11.55□□□□□ -0.56
HNRNPC-205ENST00000553300 MOV10Q9HCE1 1003 aaKnown RBP11.55□□□□□ -0.56
HNRNPC-205ENST00000553300 SLC17A5Q9NRA2 495 aa11.55□□□□□ -0.56
HNRNPC-205ENST00000553300 CISD1Q9NZ45 108 aaKnown RBP11.55□□□□□ -0.56
HNRNPC-205ENST00000553300 NPAP1Q9NZP6 1156 aa11.55□□□□□ -0.56
HNRNPC-205ENST00000553300 IGKV1D-42A0A075B6H8 117 aa11.54□□□□□ -0.56
HNRNPC-205ENST00000553300 FAM171A2A8MVW0 826 aa11.54□□□□□ -0.56
HNRNPC-205ENST00000553300 M0R082 166 aa11.54□□□□□ -0.56
HNRNPC-205ENST00000553300 MRASO14807 208 aa11.54□□□□□ -0.56
HNRNPC-205ENST00000553300 CHP2O43745 196 aa11.54□□□□□ -0.56
HNRNPC-205ENST00000553300 TPST2O60704 377 aa11.54□□□□□ -0.56
HNRNPC-205ENST00000553300 IFNA14P01570 189 aa11.54□□□□□ -0.56
HNRNPC-205ENST00000553300 DANCRP0C864 163 aa11.54□□□□□ -0.56
HNRNPC-205ENST00000553300 HOXB1P14653 301 aaPredicted RBP11.54□□□□□ -0.56
HNRNPC-205ENST00000553300 CD40P25942 277 aa11.54□□□□□ -0.56
HNRNPC-205ENST00000553300 GRPRP30550 384 aa11.54□□□□□ -0.56
HNRNPC-205ENST00000553300 MDH1P40925 334 aaKnown RBP11.54□□□□□ -0.56
HNRNPC-205ENST00000553300 SH3BGRP55822 239 aaPredicted RBP11.54□□□□□ -0.56
HNRNPC-205ENST00000553300 C1DQ13901 141 aaKnown RBP11.54□□□□□ -0.56
HNRNPC-205ENST00000553300 REP15Q6BDI9 236 aa11.54□□□□□ -0.56
HNRNPC-205ENST00000553300 NIPAL3Q6P499 406 aa11.54□□□□□ -0.56
HNRNPC-205ENST00000553300 YTHDF3Q7Z739 585 aaKnown RBP11.54□□□□□ -0.56
HNRNPC-205ENST00000553300 CALHM3Q86XJ0 350 aa11.54□□□□□ -0.56
HNRNPC-205ENST00000553300 WDR31Q8NA23 367 aa11.54□□□□□ -0.56
HNRNPC-205ENST00000553300 ZNF417Q8TAU3 575 aa11.54□□□□□ -0.56
HNRNPC-205ENST00000553300 GTPBP3Q969Y2 492 aaKnown RBP11.54□□□□□ -0.56
HNRNPC-205ENST00000553300 SLC41A3Q96GZ6 507 aa11.54□□□□□ -0.56
HNRNPC-205ENST00000553300 ZNF587Q96SQ5 575 aaPredicted RBP11.54□□□□□ -0.56
HNRNPC-205ENST00000553300 ASPNQ9BXN1 380 aa11.54□□□□□ -0.56
HNRNPC-205ENST00000553300 PCDHAC1Q9H158 963 aa11.54□□□□□ -0.56
HNRNPC-205ENST00000553300 ALG2Q9H553 416 aa11.54□□□□□ -0.56
HNRNPC-205ENST00000553300 BAG5Q9UL15 447 aa11.54□□□□□ -0.56
HNRNPC-205ENST00000553300 AP3M1Q9Y2T2 418 aa11.54□□□□□ -0.56
HNRNPC-205ENST00000553300 CAPN7Q9Y6W3 813 aa11.54□□□□□ -0.56
HNRNPC-205ENST00000553300 LOC100653049A0A140TA62 436 aa11.54□□□□□ -0.56
HNRNPC-205ENST00000553300 SHISA9B4DS77 424 aa11.54□□□□□ -0.56
HNRNPC-205ENST00000553300 OVOL3O00110 214 aa11.54□□□□□ -0.56
HNRNPC-205ENST00000553300 FXYD1O00168 92 aa11.54□□□□□ -0.56
HNRNPC-205ENST00000553300 SLC43A1O75387 559 aa11.54□□□□□ -0.56
HNRNPC-205ENST00000553300 KRT34O76011 436 aa11.54□□□□□ -0.56
HNRNPC-205ENST00000553300 ZNF432O94892 652 aa11.54□□□□□ -0.56
HNRNPC-205ENST00000553300 MT-ATP6P00846 226 aa11.54□□□□□ -0.56
HNRNPC-205ENST00000553300 OPN1SWP03999 348 aa11.54□□□□□ -0.56
HNRNPC-205ENST00000553300 INHBBP09529 407 aa11.54□□□□□ -0.56
HNRNPC-205ENST00000553300 NQO1P15559 274 aaKnown RBP11.54□□□□□ -0.56
HNRNPC-205ENST00000553300 SELENOPP49908 381 aa11.54□□□□□ -0.56
HNRNPC-205ENST00000553300 ZNF83P51522 516 aa11.54□□□□□ -0.56
HNRNPC-205ENST00000553300 FOXG1P55316 489 aaPredicted RBP11.54□□□□□ -0.56
HNRNPC-205ENST00000553300 ATP5J2P56134 94 aa11.54□□□□□ -0.56
HNRNPC-205ENST00000553300 CLDN17P56750 224 aa11.54□□□□□ -0.56
HNRNPC-205ENST00000553300 ETFDHQ16134 617 aa11.54□□□□□ -0.56
HNRNPC-205ENST00000553300 ENTPD8Q5MY95 495 aa11.54□□□□□ -0.56
HNRNPC-205ENST00000553300 C9orf135Q5VTT2 229 aa11.54□□□□□ -0.56
HNRNPC-205ENST00000553300 HMBOX1Q6NT76 420 aa11.54□□□□□ -0.56
HNRNPC-205ENST00000553300 SLC22A25Q6T423 547 aa11.54□□□□□ -0.56
HNRNPC-205ENST00000553300 LINC00114Q6XXX2 140 aa11.54□□□□□ -0.56
HNRNPC-205ENST00000553300 SNX32Q86XE0 403 aa11.54□□□□□ -0.56
HNRNPC-205ENST00000553300 KDM8Q8N371 416 aa11.54□□□□□ -0.56
HNRNPC-205ENST00000553300 PIK3C3Q8NEB9 887 aa11.54□□□□□ -0.56
HNRNPC-205ENST00000553300 KBTBD8Q8NFY9 601 aa11.54□□□□□ -0.56
HNRNPC-205ENST00000553300 GPR32P1Q8NGA4 272 aa11.54□□□□□ -0.56
HNRNPC-205ENST00000553300 OR6T1Q8NGN1 323 aa11.54□□□□□ -0.56
HNRNPC-205ENST00000553300 RP9Q8TA86 221 aaKnown RBP11.54□□□□□ -0.56
HNRNPC-205ENST00000553300 MAGEE2Q8TD90 523 aaPredicted RBP11.54□□□□□ -0.56
HNRNPC-205ENST00000553300 ADAMTS16Q8TE57 1224 aa11.54□□□□□ -0.56
HNRNPC-205ENST00000553300 TAMM41Q96BW9 452 aa11.54□□□□□ -0.56
HNRNPC-205ENST00000553300 MPP4Q96JB8 637 aa11.54□□□□□ -0.56
HNRNPC-205ENST00000553300 WFDC6Q9BQY6 131 aa11.54□□□□□ -0.56
HNRNPC-205ENST00000553300 SLC19A3Q9BZV2 496 aa11.54□□□□□ -0.56
HNRNPC-205ENST00000553300 POLR2J2Q9GZM3 115 aaKnown RBP11.54□□□□□ -0.56
HNRNPC-205ENST00000553300 POLR2J3Q9H1A7 115 aaKnown RBP11.54□□□□□ -0.56
HNRNPC-205ENST00000553300 FKRPQ9H9S5 495 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms