RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 CLEC9AQ6UXN8 241 aa11.36□□□□□ -0.59
ACTN1-207ENST00000553290 H1FNTQ75WM6 255 aaPredicted RBP11.36□□□□□ -0.59
ACTN1-207ENST00000553290 PATL1Q86TB9 770 aaKnown RBP11.36□□□□□ -0.59
ACTN1-207ENST00000553290 DTX2Q86UW9 622 aa11.36□□□□□ -0.59
ACTN1-207ENST00000553290 EPHX4Q8IUS5 362 aa11.36□□□□□ -0.59
ACTN1-207ENST00000553290 RNF217Q8TC41 542 aa11.36□□□□□ -0.59
ACTN1-207ENST00000553290 SMR3AQ99954 134 aa11.36□□□□□ -0.59
ACTN1-207ENST00000553290 TRAF4Q9BUZ4 470 aaPredicted RBP11.36□□□□□ -0.59
ACTN1-207ENST00000553290 PRR14Q9BWN1 585 aa11.36□□□□□ -0.59
ACTN1-207ENST00000553290 OBP2BQ9NPH6 170 aa11.36□□□□□ -0.59
ACTN1-207ENST00000553290 POU2F3Q9UKI9 436 aa11.36□□□□□ -0.59
ACTN1-207ENST00000553290 RCE1Q9Y256 329 aa11.36□□□□□ -0.59
ACTN1-207ENST00000553290 HEATR1Q9H583 2144 aaKnown RBP11.36□□□□□ -0.59
ACTN1-207ENST00000553290 IGKV1D-42A0A075B6H8 117 aa11.35□□□□□ -0.59
ACTN1-207ENST00000553290 LOC102725191A0A1B0GVB3 256 aa11.35□□□□□ -0.59
ACTN1-207ENST00000553290 TRIM64A6NGJ6 449 aa11.35□□□□□ -0.59
ACTN1-207ENST00000553290 TRIM64BA6NI03 449 aa11.35□□□□□ -0.59
ACTN1-207ENST00000553290 M0R082 166 aa11.35□□□□□ -0.59
ACTN1-207ENST00000553290 TPST2O60704 377 aa11.35□□□□□ -0.59
ACTN1-207ENST00000553290 FMO6PO60774 539 aa11.35□□□□□ -0.59
ACTN1-207ENST00000553290 NPPAP01160 153 aa11.35□□□□□ -0.59
ACTN1-207ENST00000553290 CD8AP01732 235 aa11.35□□□□□ -0.59
ACTN1-207ENST00000553290 CDH2P19022 906 aaPredicted RBP11.35□□□□□ -0.59
ACTN1-207ENST00000553290 GRPRP30550 384 aa11.35□□□□□ -0.59
ACTN1-207ENST00000553290 PCGF2P35227 344 aa11.35□□□□□ -0.59
ACTN1-207ENST00000553290 ARFIP2P53365 341 aa11.35□□□□□ -0.59
ACTN1-207ENST00000553290 CLDN17P56750 224 aa11.35□□□□□ -0.59
ACTN1-207ENST00000553290 C1DQ13901 141 aaKnown RBP11.35□□□□□ -0.59
ACTN1-207ENST00000553290 DUSP7Q16829 419 aa11.35□□□□□ -0.59
ACTN1-207ENST00000553290 TRMT5Q32P41 509 aaKnown RBP11.35□□□□□ -0.59
ACTN1-207ENST00000553290 COQ5Q5HYK3 327 aa11.35□□□□□ -0.59
ACTN1-207ENST00000553290 ZNF613Q6PF04 617 aa11.35□□□□□ -0.59
ACTN1-207ENST00000553290 CIARTQ8N365 385 aaPredicted RBP11.35□□□□□ -0.59
ACTN1-207ENST00000553290 KDM8Q8N371 416 aa11.35□□□□□ -0.59
ACTN1-207ENST00000553290 SMYD1Q8NB12 490 aa11.35□□□□□ -0.59
ACTN1-207ENST00000553290 ADPRHL1Q8NDY3 354 aa11.35□□□□□ -0.59
ACTN1-207ENST00000553290 ANKK1Q8NFD2 765 aa11.35□□□□□ -0.59
ACTN1-207ENST00000553290 OR10A6Q8NH74 314 aa11.35□□□□□ -0.59
ACTN1-207ENST00000553290 ZNF417Q8TAU3 575 aa11.35□□□□□ -0.59
ACTN1-207ENST00000553290 ZNF317Q96PQ6 595 aaPredicted RBP11.35□□□□□ -0.59
ACTN1-207ENST00000553290 ZNF587Q96SQ5 575 aaPredicted RBP11.35□□□□□ -0.59
ACTN1-207ENST00000553290 ARHGDIGQ99819 225 aa11.35□□□□□ -0.59
ACTN1-207ENST00000553290 SH3GL1Q99961 368 aa11.35□□□□□ -0.59
ACTN1-207ENST00000553290 DHRS9Q9BPW9 319 aa11.35□□□□□ -0.59
ACTN1-207ENST00000553290 TMEM43Q9BTV4 400 aa11.35□□□□□ -0.59
ACTN1-207ENST00000553290 C1QTNF6Q9BXI9 259 aa11.35□□□□□ -0.59
ACTN1-207ENST00000553290 FKRPQ9H9S5 495 aa11.35□□□□□ -0.59
ACTN1-207ENST00000553290 KLHL14Q9P2G3 628 aa11.35□□□□□ -0.59
ACTN1-207ENST00000553290 CORINQ9Y5Q5 1042 aa11.35□□□□□ -0.59
ACTN1-207ENST00000553290 PLCE1Q9P212 2302 aa11.35□□□□□ -0.59
ACTN1-207ENST00000553290 E7EQL1 145 aa11.34□□□□□ -0.59
ACTN1-207ENST00000553290 FBP2O00757 339 aa11.34□□□□□ -0.59
ACTN1-207ENST00000553290 SMAD7O15105 426 aaKnown RBP11.34□□□□□ -0.59
ACTN1-207ENST00000553290 AKAP8O43823 692 aaKnown RBP11.34□□□□□ -0.59
ACTN1-207ENST00000553290 SLC43A1O75387 559 aa11.34□□□□□ -0.59
ACTN1-207ENST00000553290 ZNF432O94892 652 aa11.34□□□□□ -0.59
ACTN1-207ENST00000553290 HEXAP06865 529 aa11.34□□□□□ -0.59
ACTN1-207ENST00000553290 TTKP33981 857 aa11.34□□□□□ -0.59
ACTN1-207ENST00000553290 CDKN1AP38936 164 aa11.34□□□□□ -0.59
ACTN1-207ENST00000553290 CDH12P55289 794 aa11.34□□□□□ -0.59
ACTN1-207ENST00000553290 SH3BGRP55822 239 aaPredicted RBP11.34□□□□□ -0.59
ACTN1-207ENST00000553290 SLC25A3Q00325 362 aa11.34□□□□□ -0.59
ACTN1-207ENST00000553290 LTBQ06643 244 aa11.34□□□□□ -0.59
ACTN1-207ENST00000553290 MAPRE2Q15555 327 aa11.34□□□□□ -0.59
ACTN1-207ENST00000553290 NRF1Q16656 503 aa11.34□□□□□ -0.59
ACTN1-207ENST00000553290 KRTAP21-3Q3LHN1 58 aa11.34□□□□□ -0.59
ACTN1-207ENST00000553290 TBRG1Q3YBR2 411 aa11.34□□□□□ -0.59
ACTN1-207ENST00000553290 MMEL1Q495T6 779 aa11.34□□□□□ -0.59
ACTN1-207ENST00000553290 NANOGP8Q6NSW7 305 aa11.34□□□□□ -0.59
ACTN1-207ENST00000553290 HMBOX1Q6NT76 420 aa11.34□□□□□ -0.59
ACTN1-207ENST00000553290 FBXL14Q8N1E6 418 aa11.34□□□□□ -0.59
ACTN1-207ENST00000553290 SCAIQ8N9R8 606 aa11.34□□□□□ -0.59
ACTN1-207ENST00000553290 OR1K1Q8NGR3 316 aa11.34□□□□□ -0.59
ACTN1-207ENST00000553290 MAGEE2Q8TD90 523 aaPredicted RBP11.34□□□□□ -0.59
ACTN1-207ENST00000553290 SLC26A7Q8TE54 656 aa11.34□□□□□ -0.59
ACTN1-207ENST00000553290 RASSF5Q8WWW0 418 aa11.34□□□□□ -0.59
ACTN1-207ENST00000553290 SLC41A3Q96GZ6 507 aa11.34□□□□□ -0.59
ACTN1-207ENST00000553290 POM121Q96HA1 1249 aa11.34□□□□□ -0.59
ACTN1-207ENST00000553290 ALKBH3Q96Q83 286 aaPredicted RBP11.34□□□□□ -0.59
ACTN1-207ENST00000553290 MCHR1Q99705 422 aa11.34□□□□□ -0.59
ACTN1-207ENST00000553290 WFDC6Q9BQY6 131 aa11.34□□□□□ -0.59
ACTN1-207ENST00000553290 ASPNQ9BXN1 380 aa11.34□□□□□ -0.59
ACTN1-207ENST00000553290 NANOGQ9H9S0 305 aa11.34□□□□□ -0.59
ACTN1-207ENST00000553290 BARX1Q9HBU1 254 aaPredicted RBP11.34□□□□□ -0.59
ACTN1-207ENST00000553290 FGFR1OP2Q9NVK5 253 aa11.34□□□□□ -0.59
ACTN1-207ENST00000553290 B3GAT1Q9P2W7 334 aa11.34□□□□□ -0.59
ACTN1-207ENST00000553290 SEC14L4Q9UDX3 406 aa11.34□□□□□ -0.59
ACTN1-207ENST00000553290 BBIP1A8MTZ0 92 aa11.33□□□□□ -0.6
ACTN1-207ENST00000553290 MS4A18H0YCH9 400 aa11.33□□□□□ -0.6
ACTN1-207ENST00000553290 RPL36A-HNRNPH2H7BZ11 118 aa11.33□□□□□ -0.6
ACTN1-207ENST00000553290 M0R3H8 397 aa11.33□□□□□ -0.6
ACTN1-207ENST00000553290 UPK3AO75631 287 aa11.33□□□□□ -0.6
ACTN1-207ENST00000553290 BGLAPP02818 100 aa11.33□□□□□ -0.6
ACTN1-207ENST00000553290 OPN1SWP03999 348 aa11.33□□□□□ -0.6
ACTN1-207ENST00000553290 VIMP08670 466 aaKnown RBP11.33□□□□□ -0.6
ACTN1-207ENST00000553290 HOXB1P14653 301 aaPredicted RBP11.33□□□□□ -0.6
ACTN1-207ENST00000553290 NQO1P15559 274 aaKnown RBP11.33□□□□□ -0.6
ACTN1-207ENST00000553290 CBLP22681 906 aa11.33□□□□□ -0.6
ACTN1-207ENST00000553290 GZMMP51124 257 aa11.33□□□□□ -0.6
ACTN1-207ENST00000553290 FABP6P51161 128 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms