RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 NCF1CA8MVU1 366 aaPredicted RBP3.73□□□□□ -1.81
SCFD1-209ENST00000553280 DLGAP1O14490 977 aa3.73□□□□□ -1.81
SCFD1-209ENST00000553280 CASC3O15234 703 aaKnown RBP3.73□□□□□ -1.81
SCFD1-209ENST00000553280 CLOCKO15516 846 aa3.73□□□□□ -1.81
SCFD1-209ENST00000553280 OR2F2O95006 317 aa3.73□□□□□ -1.81
SCFD1-209ENST00000553280 GIG44P09565 113 aaPredicted RBP3.73□□□□□ -1.81
SCFD1-209ENST00000553280 GZMAP12544 262 aa3.73□□□□□ -1.81
SCFD1-209ENST00000553280 TNNT2P45379 298 aaPredicted RBP3.73□□□□□ -1.81
SCFD1-209ENST00000553280 FBXW4P57775 412 aa3.73□□□□□ -1.81
SCFD1-209ENST00000553280 MERTKQ12866 999 aa3.73□□□□□ -1.81
SCFD1-209ENST00000553280 KIAA0040Q15053 153 aa3.73□□□□□ -1.81
SCFD1-209ENST00000553280 MARCH8Q5T0T0 291 aa3.73□□□□□ -1.81
SCFD1-209ENST00000553280 TIGD3Q6B0B8 471 aa3.73□□□□□ -1.81
SCFD1-209ENST00000553280 SASS6Q6UVJ0 657 aa3.73□□□□□ -1.81
SCFD1-209ENST00000553280 NIPA1Q7RTP0 329 aa3.73□□□□□ -1.81
SCFD1-209ENST00000553280 PRSS41Q7RTY9 318 aa3.73□□□□□ -1.81
SCFD1-209ENST00000553280 ZNF589Q86UQ0 364 aaPredicted RBP3.73□□□□□ -1.81
SCFD1-209ENST00000553280 PLA2G4DQ86XP0 818 aa3.73□□□□□ -1.81
SCFD1-209ENST00000553280 PIANPQ8IYJ0 282 aa3.73□□□□□ -1.81
SCFD1-209ENST00000553280 C6orf223Q8N319 242 aa3.73□□□□□ -1.81
SCFD1-209ENST00000553280 FNDC5Q8NAU1 212 aa3.73□□□□□ -1.81
SCFD1-209ENST00000553280 OR6C4Q8NGE1 309 aa3.73□□□□□ -1.81
SCFD1-209ENST00000553280 OR1E3Q8WZA6 343 aa3.73□□□□□ -1.81
SCFD1-209ENST00000553280 STARD8Q92502 1023 aa3.73□□□□□ -1.81
SCFD1-209ENST00000553280 PEX13Q92968 403 aa3.73□□□□□ -1.81
SCFD1-209ENST00000553280 MS4A4EQ96PG1 132 aa3.73□□□□□ -1.81
SCFD1-209ENST00000553280 BPIFA3Q9BQP9 254 aa3.73□□□□□ -1.81
SCFD1-209ENST00000553280 C20orf24Q9BUV8 137 aa3.73□□□□□ -1.81
SCFD1-209ENST00000553280 ACTR6Q9GZN1 396 aa3.73□□□□□ -1.81
SCFD1-209ENST00000553280 RACGAP1Q9H0H5 632 aa3.73□□□□□ -1.81
SCFD1-209ENST00000553280 C20orf85Q9H1P6 137 aa3.73□□□□□ -1.81
SCFD1-209ENST00000553280 AUNIPQ9H7T9 357 aa3.73□□□□□ -1.81
SCFD1-209ENST00000553280 LY9Q9HBG7 655 aa3.73□□□□□ -1.81
SCFD1-209ENST00000553280 B4GALT7Q9UBV7 327 aa3.73□□□□□ -1.81
SCFD1-209ENST00000553280 PITPNC1Q9UKF7 332 aa3.73□□□□□ -1.81
SCFD1-209ENST00000553280 VANGL2Q9ULK5 521 aa3.73□□□□□ -1.81
SCFD1-209ENST00000553280 MOKQ9UQ07 419 aa3.73□□□□□ -1.81
SCFD1-209ENST00000553280 USP47Q96K76 1375 aa3.73□□□□□ -1.81
SCFD1-209ENST00000553280 CDHR2Q9BYE9 1310 aa3.72□□□□□ -1.81
SCFD1-209ENST00000553280 SYNRGQ9UMZ2 1314 aa3.72□□□□□ -1.81
SCFD1-209ENST00000553280 IGHV3OR16-13A0A075B7E8 117 aa3.72□□□□□ -1.81
SCFD1-209ENST00000553280 NSG1A0A0A6YYJ2 146 aa3.72□□□□□ -1.81
SCFD1-209ENST00000553280 A6NIZ1 184 aa3.72□□□□□ -1.81
SCFD1-209ENST00000553280 LSM1O15116 133 aaKnown RBP3.72□□□□□ -1.81
SCFD1-209ENST00000553280 DNAJB6O75190 326 aa3.72□□□□□ -1.81
SCFD1-209ENST00000553280 SNAPINO95295 136 aa3.72□□□□□ -1.81
SCFD1-209ENST00000553280 H6PDO95479 791 aa3.72□□□□□ -1.81
SCFD1-209ENST00000553280 IGHV2-5P01817 119 aa3.72□□□□□ -1.81
SCFD1-209ENST00000553280 P0C879 139 aa3.72□□□□□ -1.81
SCFD1-209ENST00000553280 ATP6V1B2P21281 511 aa3.72□□□□□ -1.81
SCFD1-209ENST00000553280 KLK7P49862 253 aa3.72□□□□□ -1.81
SCFD1-209ENST00000553280 SLC26A2P50443 739 aa3.72□□□□□ -1.81
SCFD1-209ENST00000553280 RIPPLY3P57055 190 aa3.72□□□□□ -1.81
SCFD1-209ENST00000553280 RAP1BP61224 184 aa3.72□□□□□ -1.81
SCFD1-209ENST00000553280 MRPS22P82650 360 aaKnown RBP3.72□□□□□ -1.81
SCFD1-209ENST00000553280 C1orf146Q5VVC0 180 aa3.72□□□□□ -1.81
SCFD1-209ENST00000553280 FAM220AQ7Z4H9 259 aa3.72□□□□□ -1.81
SCFD1-209ENST00000553280 SCD5Q86SK9 330 aa3.72□□□□□ -1.81
SCFD1-209ENST00000553280 SLC26A11Q86WA9 606 aa3.72□□□□□ -1.81
SCFD1-209ENST00000553280 TMEM252Q8N6L7 170 aa3.72□□□□□ -1.81
SCFD1-209ENST00000553280 ACOT4Q8N9L9 421 aa3.72□□□□□ -1.81
SCFD1-209ENST00000553280 OR10H4Q8NGA5 316 aa3.72□□□□□ -1.81
SCFD1-209ENST00000553280 OR10G3Q8NGC4 313 aa3.72□□□□□ -1.81
SCFD1-209ENST00000553280 MRAPQ8TCY5 172 aa3.72□□□□□ -1.81
SCFD1-209ENST00000553280 ANKRD49Q8WVL7 239 aa3.72□□□□□ -1.81
SCFD1-209ENST00000553280 CNPY3Q9BT09 278 aa3.72□□□□□ -1.81
SCFD1-209ENST00000553280 ZDHHC11Q9H8X9 412 aa3.72□□□□□ -1.81
SCFD1-209ENST00000553280 ZNF275Q9NSD4 429 aaPredicted RBP3.72□□□□□ -1.81
SCFD1-209ENST00000553280 VNN3Q9NY84 501 aa3.72□□□□□ -1.81
SCFD1-209ENST00000553280 TREM2Q9NZC2 230 aa3.72□□□□□ -1.81
SCFD1-209ENST00000553280 GCNT4Q9P109 453 aa3.72□□□□□ -1.81
SCFD1-209ENST00000553280 ZNF107Q9UII5 783 aaPredicted RBP3.72□□□□□ -1.81
SCFD1-209ENST00000553280 PLEKHG2Q9H7P9 1386 aa3.72□□□□□ -1.81
SCFD1-209ENST00000553280 CFAP65Q6ZU64 1925 aaKnown RBP3.72□□□□□ -1.81
SCFD1-209ENST00000553280 GOLGA6L7A0A1B0GV03 622 aa3.71□□□□□ -1.82
SCFD1-209ENST00000553280 H0YC42 278 aa3.71□□□□□ -1.82
SCFD1-209ENST00000553280 L7N2F9 121 aa3.71□□□□□ -1.82
SCFD1-209ENST00000553280 ERLIN2O94905 339 aa3.71□□□□□ -1.82
SCFD1-209ENST00000553280 C2P06681 752 aa3.71□□□□□ -1.82
SCFD1-209ENST00000553280 OR8G3PP0DMU2 310 aa3.71□□□□□ -1.82
SCFD1-209ENST00000553280 CXCR2P25025 360 aa3.71□□□□□ -1.82
SCFD1-209ENST00000553280 PEX19P40855 299 aa3.71□□□□□ -1.82
SCFD1-209ENST00000553280 OR3A4PP47883 348 aa3.71□□□□□ -1.82
SCFD1-209ENST00000553280 TFPI2P48307 235 aa3.71□□□□□ -1.82
SCFD1-209ENST00000553280 RAB9AP51151 201 aa3.71□□□□□ -1.82
SCFD1-209ENST00000553280 DIO3P55073 304 aa3.71□□□□□ -1.82
SCFD1-209ENST00000553280 ERVK-25P63136 954 aa3.71□□□□□ -1.82
SCFD1-209ENST00000553280 ZNF763Q0D2J5 394 aa3.71□□□□□ -1.82
SCFD1-209ENST00000553280 CHRNA6Q15825 494 aa3.71□□□□□ -1.82
SCFD1-209ENST00000553280 C1orf94Q6P1W5 598 aa3.71□□□□□ -1.82
SCFD1-209ENST00000553280 TMEM220Q6QAJ8 160 aa3.71□□□□□ -1.82
SCFD1-209ENST00000553280 Q6ZN92 141 aa3.71□□□□□ -1.82
SCFD1-209ENST00000553280 ZNF571Q7Z3V5 609 aaPredicted RBP3.71□□□□□ -1.82
SCFD1-209ENST00000553280 HSD17B13Q7Z5P4 300 aaPredicted RBP3.71□□□□□ -1.82
SCFD1-209ENST00000553280 CDC20BQ86Y33 519 aa3.71□□□□□ -1.82
SCFD1-209ENST00000553280 OR52I1Q8NGK6 324 aa3.71□□□□□ -1.82
SCFD1-209ENST00000553280 ITCHQ96J02 903 aa3.71□□□□□ -1.82
SCFD1-209ENST00000553280 SMIM14Q96QK8 99 aa3.71□□□□□ -1.82
SCFD1-209ENST00000553280 OR8B4Q96RC9 309 aa3.71□□□□□ -1.82
SCFD1-209ENST00000553280 SORT1Q99523 831 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms