RNA–Protein interactions for RNA: ENST00000552801.6

TMEM116-217, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 1,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-217ENST00000552801 IQCCQ4KMZ1 466 aa7.65□□□□□ -1.18
TMEM116-217ENST00000552801 LIN52Q52LA3 116 aa7.65□□□□□ -1.18
TMEM116-217ENST00000552801 EXOSC6Q5RKV6 272 aaKnown RBP7.65□□□□□ -1.18
TMEM116-217ENST00000552801 RNF220Q5VTB9 566 aa7.65□□□□□ -1.18
TMEM116-217ENST00000552801 OR4F3Q6IEY1 312 aa7.65□□□□□ -1.18
TMEM116-217ENST00000552801 TNFAIP8L2Q6P589 184 aaPredicted RBP7.65□□□□□ -1.18
TMEM116-217ENST00000552801 UGT2A3Q6UWM9 527 aa7.65□□□□□ -1.18
TMEM116-217ENST00000552801 HACD2Q6Y1H2 254 aa7.65□□□□□ -1.18
TMEM116-217ENST00000552801 SLC46A3Q7Z3Q1 461 aa7.65□□□□□ -1.18
TMEM116-217ENST00000552801 SNX32Q86XE0 403 aa7.65□□□□□ -1.18
TMEM116-217ENST00000552801 PHC2Q8IXK0 858 aa7.65□□□□□ -1.18
TMEM116-217ENST00000552801 ZNF525Q8N782 197 aa7.65□□□□□ -1.18
TMEM116-217ENST00000552801 TRIML2Q8N7C3 387 aa7.65□□□□□ -1.18
TMEM116-217ENST00000552801 ELOA3Q8NG57 546 aa7.65□□□□□ -1.18
TMEM116-217ENST00000552801 SLC26A7Q8TE54 656 aa7.65□□□□□ -1.18
TMEM116-217ENST00000552801 OIT3Q8WWZ8 545 aa7.65□□□□□ -1.18
TMEM116-217ENST00000552801 HTRA1Q92743 480 aa7.65□□□□□ -1.18
TMEM116-217ENST00000552801 PROX1Q92786 737 aa7.65□□□□□ -1.18
TMEM116-217ENST00000552801 C3orf49Q96BT1 292 aa7.65□□□□□ -1.18
TMEM116-217ENST00000552801 PPP1R36Q96LQ0 422 aa7.65□□□□□ -1.18
TMEM116-217ENST00000552801 SH3GL3Q99963 347 aa7.65□□□□□ -1.18
TMEM116-217ENST00000552801 CHODLQ9H9P2 273 aa7.65□□□□□ -1.18
TMEM116-217ENST00000552801 CTPS2Q9NRF8 586 aa7.65□□□□□ -1.18
TMEM116-217ENST00000552801 POLE3Q9NRF9 147 aa7.65□□□□□ -1.18
TMEM116-217ENST00000552801 PAPOLBQ9NRJ5 636 aaKnown RBP7.65□□□□□ -1.18
TMEM116-217ENST00000552801 NPAP1Q9NZP6 1156 aa7.65□□□□□ -1.18
TMEM116-217ENST00000552801 NDUFA13Q9P0J0 144 aa7.65□□□□□ -1.18
TMEM116-217ENST00000552801 TMEM181Q9P2C4 612 aa7.65□□□□□ -1.18
TMEM116-217ENST00000552801 RAB26Q9ULW5 256 aa7.65□□□□□ -1.18
TMEM116-217ENST00000552801 IGKV3D-15A0A087WSY6 115 aa7.64□□□□□ -1.19
TMEM116-217ENST00000552801 NPIPB9F8W1W9 429 aa7.64□□□□□ -1.19
TMEM116-217ENST00000552801 RNASET2O00584 256 aaKnown RBP7.64□□□□□ -1.19
TMEM116-217ENST00000552801 SDHDO14521 159 aa7.64□□□□□ -1.19
TMEM116-217ENST00000552801 ACOT8O14734 319 aa7.64□□□□□ -1.19
TMEM116-217ENST00000552801 GPRIN2O60269 458 aa7.64□□□□□ -1.19
TMEM116-217ENST00000552801 LMX1BO60663 402 aa7.64□□□□□ -1.19
TMEM116-217ENST00000552801 FCMRO60667 390 aa7.64□□□□□ -1.19
TMEM116-217ENST00000552801 UGT2B17O75795 530 aa7.64□□□□□ -1.19
TMEM116-217ENST00000552801 BAG2O95816 211 aa7.64□□□□□ -1.19
TMEM116-217ENST00000552801 IL7RP16871 459 aa7.64□□□□□ -1.19
TMEM116-217ENST00000552801 ZNF16P17020 682 aaPredicted RBP7.64□□□□□ -1.19
TMEM116-217ENST00000552801 NCF2P19878 526 aaPredicted RBP7.64□□□□□ -1.19
TMEM116-217ENST00000552801 CXCR1P25024 350 aa7.64□□□□□ -1.19
TMEM116-217ENST00000552801 IDH2P48735 452 aaKnown RBP7.64□□□□□ -1.19
TMEM116-217ENST00000552801 POLR2HP52434 150 aaKnown RBP7.64□□□□□ -1.19
TMEM116-217ENST00000552801 CHN2P52757 468 aa7.64□□□□□ -1.19
TMEM116-217ENST00000552801 CLDN8P56748 225 aa7.64□□□□□ -1.19
TMEM116-217ENST00000552801 UBE2NP61088 152 aaKnown RBP7.64□□□□□ -1.19
TMEM116-217ENST00000552801 COPZ1P61923 177 aa7.64□□□□□ -1.19
TMEM116-217ENST00000552801 VLDLRP98155 873 aa7.64□□□□□ -1.19
TMEM116-217ENST00000552801 EMX2Q04743 252 aa7.64□□□□□ -1.19
TMEM116-217ENST00000552801 LOXL1Q08397 574 aaPredicted RBP7.64□□□□□ -1.19
TMEM116-217ENST00000552801 SPOCK1Q08629 439 aa7.64□□□□□ -1.19
TMEM116-217ENST00000552801 MED21Q13503 144 aa7.64□□□□□ -1.19
TMEM116-217ENST00000552801 APOFQ13790 326 aa7.64□□□□□ -1.19
TMEM116-217ENST00000552801 CYLC2Q14093 348 aaPredicted RBP7.64□□□□□ -1.19
TMEM116-217ENST00000552801 SQLEQ14534 574 aa7.64□□□□□ -1.19
TMEM116-217ENST00000552801 MAPRE2Q15555 327 aa7.64□□□□□ -1.19
TMEM116-217ENST00000552801 TRIP10Q15642 601 aa7.64□□□□□ -1.19
TMEM116-217ENST00000552801 PDCD2Q16342 344 aaPredicted RBP7.64□□□□□ -1.19
TMEM116-217ENST00000552801 XKR7Q5GH72 579 aa7.64□□□□□ -1.19
TMEM116-217ENST00000552801 ABLIM2Q6H8Q1 611 aa7.64□□□□□ -1.19
TMEM116-217ENST00000552801 FAM166AQ6J272 317 aa7.64□□□□□ -1.19
TMEM116-217ENST00000552801 C8orf82Q6P1X6 216 aaPredicted RBP7.64□□□□□ -1.19
TMEM116-217ENST00000552801 ARPINQ7Z6K5 226 aa7.64□□□□□ -1.19
TMEM116-217ENST00000552801 GPAT4Q86UL3 456 aa7.64□□□□□ -1.19
TMEM116-217ENST00000552801 ANKRD46Q86W74 232 aa7.64□□□□□ -1.19
TMEM116-217ENST00000552801 CLECL1Q8IZS7 167 aa7.64□□□□□ -1.19
TMEM116-217ENST00000552801 CLEC4FQ8N1N0 589 aa7.64□□□□□ -1.19
TMEM116-217ENST00000552801 C17orf78Q8N4C9 275 aa7.64□□□□□ -1.19
TMEM116-217ENST00000552801 C1orf162Q8NEQ5 155 aaPredicted RBP7.64□□□□□ -1.19
TMEM116-217ENST00000552801 RAB8BQ92930 207 aa7.64□□□□□ -1.19
TMEM116-217ENST00000552801 ROPN1LQ96C74 230 aa7.64□□□□□ -1.19
TMEM116-217ENST00000552801 CCDC124Q96CT7 223 aaKnown RBP7.64□□□□□ -1.19
TMEM116-217ENST00000552801 FBXO17Q96EF6 278 aa7.64□□□□□ -1.19
TMEM116-217ENST00000552801 VRK1Q99986 396 aaPredicted RBP7.64□□□□□ -1.19
TMEM116-217ENST00000552801 TAPBPLQ9BX59 468 aa7.64□□□□□ -1.19
TMEM116-217ENST00000552801 ZNF350Q9GZX5 532 aa7.64□□□□□ -1.19
TMEM116-217ENST00000552801 Q9H521 79 aa7.64□□□□□ -1.19
TMEM116-217ENST00000552801 ZNF696Q9H7X3 374 aa7.64□□□□□ -1.19
TMEM116-217ENST00000552801 MEAF6Q9HAF1 191 aa7.64□□□□□ -1.19
TMEM116-217ENST00000552801 SLC25A15Q9Y619 301 aa7.64□□□□□ -1.19
TMEM116-217ENST00000552801 COMMD3-BMI1R4GMX3 469 aa7.64□□□□□ -1.19
TMEM116-217ENST00000552801 TMED7-TICAM2A0A0A6YYA0 188 aa7.63□□□□□ -1.19
TMEM116-217ENST00000552801 LOC100289279A0A1B0GTE1 492 aa7.63□□□□□ -1.19
TMEM116-217ENST00000552801 TMEM247A6NEH6 219 aa7.63□□□□□ -1.19
TMEM116-217ENST00000552801 ADARB2-AS1A8MUL3 147 aa7.63□□□□□ -1.19
TMEM116-217ENST00000552801 H7C417 338 aa7.63□□□□□ -1.19
TMEM116-217ENST00000552801 ETV2O00321 342 aaPredicted RBP7.63□□□□□ -1.19
TMEM116-217ENST00000552801 KIAA0513O60268 411 aa7.63□□□□□ -1.19
TMEM116-217ENST00000552801 CRYAAP02489 173 aa7.63□□□□□ -1.19
TMEM116-217ENST00000552801 GPIP06744 558 aa7.63□□□□□ -1.19
TMEM116-217ENST00000552801 NR2F1P10589 423 aa7.63□□□□□ -1.19
TMEM116-217ENST00000552801 APEHP13798 732 aaKnown RBP7.63□□□□□ -1.19
TMEM116-217ENST00000552801 GTF2E2P29084 291 aaKnown RBP7.63□□□□□ -1.19
TMEM116-217ENST00000552801 MPGP29372 298 aa7.63□□□□□ -1.19
TMEM116-217ENST00000552801 S100A3P33764 101 aa7.63□□□□□ -1.19
TMEM116-217ENST00000552801 MRPL19P49406 292 aaKnown RBP7.63□□□□□ -1.19
TMEM116-217ENST00000552801 MAP2K6P52564 334 aa7.63□□□□□ -1.19
TMEM116-217ENST00000552801 PHC1P78364 1004 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 126.3 ms