RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 YJEFN3A6XGL0 299 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 A8MXE2 369 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 FAM227AF5H4B4 570 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 RNASEK-C17orf49H0YIS7 233 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 SYT5O00445 386 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 RNASET2O00584 256 aaKnown RBP4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 ADAM10O14672 748 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 PHOX2AO14813 284 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 SCAMP2O15127 329 aaKnown RBP4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 OGG1O15527 345 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 PRAMEF4O60810 478 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 KHDRBS3O75525 346 aaKnown RBP4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 GATBO75879 557 aaKnown RBP4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 ARIH2O95376 493 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 NSA2O95478 260 aaKnown RBP4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 F10P00742 488 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 PDYNP01213 254 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 IFNA17P01571 189 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 APODP05090 189 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 ANXA2P07355 339 aaKnown RBP4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 SPARCP09486 303 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 METTL15P1P0C7V9 234 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 PRSS56P0CW18 603 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 GLI4P10075 376 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 CKBP12277 381 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 LYL1P12980 280 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 GJA1P17302 382 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 CELP19835 753 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 SDHBP21912 280 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 LPOP22079 712 aaPredicted RBP4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 LMO2P25791 158 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 DPP4P27487 766 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 ADORA2BP29275 332 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 PBLDP30039 288 aaPredicted RBP4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 HTR1FP30939 366 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 FEN1P39748 380 aaKnown RBP4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 CASRP41180 1078 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 MAGEB1P43366 347 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 OR1E2P47887 323 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 RGS19P49795 217 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 RENBPP51606 427 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 LUMP51884 338 aaPredicted RBP4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 SMIM11AP58511 58 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 PPP2CBP62714 309 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 RBX1P62877 108 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 PPP2CAP67775 309 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 SORDQ00796 357 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 MEF2AQ02078 507 aaPredicted RBP4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 NFATC2Q13469 925 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 PDE7AQ13946 482 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 SCARB2Q14108 478 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 GAMTQ14353 236 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 RAB35Q15286 201 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 TOMM34Q15785 309 aaPredicted RBP4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 ZSWIM7Q19AV6 140 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 ZXDCQ2QGD7 858 aaPredicted RBP4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 TRIM61Q5EBN2 209 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 XKR4Q5GH76 650 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 UBE2NLQ5JXB2 153 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 TMEM31Q5JXX7 168 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 PRAMEF9Q5VWM5 478 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 C9orf57Q5W0N0 161 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 DMKNQ6E0U4 476 aaPredicted RBP4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 ADNP2Q6IQ32 1131 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 APOOLQ6UXV4 268 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 ZNF621Q6ZSS3 439 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 CLEC20AQ6ZU45 233 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 NDUFAF7Q7L592 441 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 TAS1R1Q7RTX1 841 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 ZNF546Q86UE3 836 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 TMEM200AQ86VY9 491 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 VRK3Q8IV63 474 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 FBXO16Q8IX29 292 aaPredicted RBP4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 C9orf40Q8IXQ3 194 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 KLHDC8AQ8IYD2 350 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 PIANPQ8IYJ0 282 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 CMTM4Q8IZR5 234 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 HIST3H2BBQ8N257 126 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 NLGN1Q8N2Q7 840 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 MUC20Q8N307 709 aaPredicted RBP4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 TRAM1L1Q8N609 369 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 IQCF1Q8N6M8 205 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 SIDT2Q8NBJ9 832 aaKnown RBP4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 OR2L5Q8NG80 312 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 OR56B1Q8NGI3 324 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 OR5M8Q8NGP6 311 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 OR13C4Q8NGS5 318 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 POC1BQ8TC44 478 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 SPPL3Q8TCT6 385 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 RPS4Y2Q8TD47 263 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 ST7LQ8TDW4 575 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 DTD1Q8TEA8 209 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 HASPINQ8TF76 798 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 NUDCD2Q8WVJ2 157 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 PHYHIPQ92561 330 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 MAL2Q969L2 176 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 ECHDC3Q96DC8 303 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 CXorf40BQ96DE9 158 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 FBXO17Q96EF6 278 aa4.84□□□□□ -1.63
LSM3P2-201ENST00000551246 PIK3IP1Q96FE7 263 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms