RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 HNRNPCL3B7ZW38 293 aa11.15□□□□□ -0.62
PTCH1-221ENST00000550914 FTCDNL1E5RQL4 147 aa11.15□□□□□ -0.62
PTCH1-221ENST00000550914 HDAC3O15379 428 aa11.15□□□□□ -0.62
PTCH1-221ENST00000550914 HNRNPCL1O60812 293 aaKnown RBP11.15□□□□□ -0.62
PTCH1-221ENST00000550914 UPK3AO75631 287 aa11.15□□□□□ -0.62
PTCH1-221ENST00000550914 ZNF432O94892 652 aa11.15□□□□□ -0.62
PTCH1-221ENST00000550914 AHSA1O95433 338 aa11.15□□□□□ -0.62
PTCH1-221ENST00000550914 STAMBPO95630 424 aa11.15□□□□□ -0.62
PTCH1-221ENST00000550914 C8BP07358 591 aa11.15□□□□□ -0.62
PTCH1-221ENST00000550914 TACSTD2P09758 323 aa11.15□□□□□ -0.62
PTCH1-221ENST00000550914 HNRNPCL4P0DMR1 293 aa11.15□□□□□ -0.62
PTCH1-221ENST00000550914 IDO1P14902 403 aa11.15□□□□□ -0.62
PTCH1-221ENST00000550914 CBR1P16152 277 aa11.15□□□□□ -0.62
PTCH1-221ENST00000550914 ZNF43P17038 809 aa11.15□□□□□ -0.62
PTCH1-221ENST00000550914 NCF2P19878 526 aaPredicted RBP11.15□□□□□ -0.62
PTCH1-221ENST00000550914 NPR2P20594 1047 aa11.15□□□□□ -0.62
PTCH1-221ENST00000550914 CALCRP30988 508 aa11.15□□□□□ -0.62
PTCH1-221ENST00000550914 CRATP43155 626 aa11.15□□□□□ -0.62
PTCH1-221ENST00000550914 DSTNP60981 165 aa11.15□□□□□ -0.62
PTCH1-221ENST00000550914 ROR2Q01974 943 aaKnown RBP11.15□□□□□ -0.62
PTCH1-221ENST00000550914 POU3F1Q03052 451 aaPredicted RBP11.15□□□□□ -0.62
PTCH1-221ENST00000550914 LGALS3BPQ08380 585 aa11.15□□□□□ -0.62
PTCH1-221ENST00000550914 BST1Q10588 318 aa11.15□□□□□ -0.62
PTCH1-221ENST00000550914 CARTPTQ16568 116 aa11.15□□□□□ -0.62
PTCH1-221ENST00000550914 LIPNQ5VXI9 398 aa11.15□□□□□ -0.62
PTCH1-221ENST00000550914 UGT2A3Q6UWM9 527 aa11.15□□□□□ -0.62
PTCH1-221ENST00000550914 C5orf46Q6UWT4 87 aa11.15□□□□□ -0.62
PTCH1-221ENST00000550914 MSANTD1Q6ZTZ1 278 aa11.15□□□□□ -0.62
PTCH1-221ENST00000550914 CLIP4Q8N3C7 705 aa11.15□□□□□ -0.62
PTCH1-221ENST00000550914 SLC38A5Q8WUX1 472 aa11.15□□□□□ -0.62
PTCH1-221ENST00000550914 C12orf10Q9HB07 376 aa11.15□□□□□ -0.62
PTCH1-221ENST00000550914 PCDHB14Q9Y5E9 798 aa11.15□□□□□ -0.62
PTCH1-221ENST00000550914 A0A096LPE4 126 aa11.14□□□□□ -0.63
PTCH1-221ENST00000550914 A0A1W2PPZ6 126 aa11.14□□□□□ -0.63
PTCH1-221ENST00000550914 TMEM247A6NEH6 219 aa11.14□□□□□ -0.63
PTCH1-221ENST00000550914 hCG_2039718K7EN88 272 aa11.14□□□□□ -0.63
PTCH1-221ENST00000550914 NR5A2O00482 541 aa11.14□□□□□ -0.63
PTCH1-221ENST00000550914 OR2T1O43869 369 aa11.14□□□□□ -0.63
PTCH1-221ENST00000550914 SLC43A1O75387 559 aa11.14□□□□□ -0.63
PTCH1-221ENST00000550914 SLC22A3O75751 556 aa11.14□□□□□ -0.63
PTCH1-221ENST00000550914 BCHEP06276 602 aa11.14□□□□□ -0.63
PTCH1-221ENST00000550914 PNMTP11086 282 aa11.14□□□□□ -0.63
PTCH1-221ENST00000550914 PRG2P13727 222 aa11.14□□□□□ -0.63
PTCH1-221ENST00000550914 ETFAP13804 333 aa11.14□□□□□ -0.63
PTCH1-221ENST00000550914 DAOP14920 347 aa11.14□□□□□ -0.63
PTCH1-221ENST00000550914 ARR3P36575 388 aa11.14□□□□□ -0.63
PTCH1-221ENST00000550914 CHN2P52757 468 aa11.14□□□□□ -0.63
PTCH1-221ENST00000550914 HGFACQ04756 655 aa11.14□□□□□ -0.63
PTCH1-221ENST00000550914 MPP2Q14168 576 aa11.14□□□□□ -0.63
PTCH1-221ENST00000550914 CR1LQ2VPA4 569 aa11.14□□□□□ -0.63
PTCH1-221ENST00000550914 PDCD4Q53EL6 469 aaKnown RBP11.14□□□□□ -0.63
PTCH1-221ENST00000550914 TNFAIP8L3Q5GJ75 292 aa11.14□□□□□ -0.63
PTCH1-221ENST00000550914 C6orf89Q6UWU4 347 aa11.14□□□□□ -0.63
PTCH1-221ENST00000550914 IL17RELQ6ZVW7 336 aa11.14□□□□□ -0.63
PTCH1-221ENST00000550914 SERPINA11Q86U17 422 aa11.14□□□□□ -0.63
PTCH1-221ENST00000550914 ZNF786Q8N393 782 aa11.14□□□□□ -0.63
PTCH1-221ENST00000550914 RFLNBQ8N5W9 214 aa11.14□□□□□ -0.63
PTCH1-221ENST00000550914 TRIM44Q96DX7 344 aaPredicted RBP11.14□□□□□ -0.63
PTCH1-221ENST00000550914 OXGR1Q96P68 337 aa11.14□□□□□ -0.63
PTCH1-221ENST00000550914 DOK1Q99704 481 aa11.14□□□□□ -0.63
PTCH1-221ENST00000550914 PTDSS2Q9BVG9 487 aa11.14□□□□□ -0.63
PTCH1-221ENST00000550914 TPT1P8Q9HAU6 139 aa11.14□□□□□ -0.63
PTCH1-221ENST00000550914 SLC6A13Q9NSD5 602 aa11.14□□□□□ -0.63
PTCH1-221ENST00000550914 CHST2Q9Y4C5 530 aa11.14□□□□□ -0.63
PTCH1-221ENST00000550914 IGHV2OR16-5A0A0B4J2B6 119 aa11.13□□□□□ -0.63
PTCH1-221ENST00000550914 LOC102725191A0A1B0GVB3 256 aa11.13□□□□□ -0.63
PTCH1-221ENST00000550914 SLCO1B7G3V0H7 640 aa11.13□□□□□ -0.63
PTCH1-221ENST00000550914 AIM2O14862 343 aa11.13□□□□□ -0.63
PTCH1-221ENST00000550914 AKAP8O43823 692 aaKnown RBP11.13□□□□□ -0.63
PTCH1-221ENST00000550914 GTF2E2P29084 291 aaKnown RBP11.13□□□□□ -0.63
PTCH1-221ENST00000550914 EPHA3P29320 983 aa11.13□□□□□ -0.63
PTCH1-221ENST00000550914 THBS4P35443 961 aa11.13□□□□□ -0.63
PTCH1-221ENST00000550914 CLDN17P56750 224 aa11.13□□□□□ -0.63
PTCH1-221ENST00000550914 TUBA1BP68363 451 aa11.13□□□□□ -0.63
PTCH1-221ENST00000550914 TUBA4AP68366 448 aa11.13□□□□□ -0.63
PTCH1-221ENST00000550914 ARF1P84077 181 aaKnown RBP11.13□□□□□ -0.63
PTCH1-221ENST00000550914 EGR4Q05215 589 aa11.13□□□□□ -0.63
PTCH1-221ENST00000550914 VHLLQ6RSH7 139 aa11.13□□□□□ -0.63
PTCH1-221ENST00000550914 TUBA1AQ71U36 451 aa11.13□□□□□ -0.63
PTCH1-221ENST00000550914 LSRQ86X29 649 aaPredicted RBP11.13□□□□□ -0.63
PTCH1-221ENST00000550914 LINC01356Q8N9X3 169 aa11.13□□□□□ -0.63
PTCH1-221ENST00000550914 PIK3C3Q8NEB9 887 aa11.13□□□□□ -0.63
PTCH1-221ENST00000550914 C1orf159Q96HA4 380 aa11.13□□□□□ -0.63
PTCH1-221ENST00000550914 TMEM19Q96HH6 336 aa11.13□□□□□ -0.63
PTCH1-221ENST00000550914 ITCHQ96J02 903 aa11.13□□□□□ -0.63
PTCH1-221ENST00000550914 WDR55Q9H6Y2 383 aaPredicted RBP11.13□□□□□ -0.63
PTCH1-221ENST00000550914 RMND5AQ9H871 391 aa11.13□□□□□ -0.63
PTCH1-221ENST00000550914 GPR35Q9HC97 309 aa11.13□□□□□ -0.63
PTCH1-221ENST00000550914 BCL2L10Q9HD36 194 aa11.13□□□□□ -0.63
PTCH1-221ENST00000550914 THAP1Q9NVV9 213 aa11.13□□□□□ -0.63
PTCH1-221ENST00000550914 ZIM2Q9NZV7 527 aa11.13□□□□□ -0.63
PTCH1-221ENST00000550914 B3GAT1Q9P2W7 334 aa11.13□□□□□ -0.63
PTCH1-221ENST00000550914 TMEM129A0AVI4 362 aa11.12□□□□□ -0.63
PTCH1-221ENST00000550914 LILRA1O75019 489 aa11.12□□□□□ -0.63
PTCH1-221ENST00000550914 SNNO75324 88 aaPredicted RBP11.12□□□□□ -0.63
PTCH1-221ENST00000550914 ANP32DO95626 131 aa11.12□□□□□ -0.63
PTCH1-221ENST00000550914 CELA3BP08861 270 aa11.12□□□□□ -0.63
PTCH1-221ENST00000550914 BMP2P12643 396 aa11.12□□□□□ -0.63
PTCH1-221ENST00000550914 PCMT1P22061 227 aa11.12□□□□□ -0.63
PTCH1-221ENST00000550914 RPS5P46782 204 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms