RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 UMPSP11172 480 aa14.41□□□□□ -0.1
CHMP1A-209ENST00000550872 IFI30P13284 250 aa14.41□□□□□ -0.1
CHMP1A-209ENST00000550872 SMIM11AP58511 58 aa14.41□□□□□ -0.1
CHMP1A-209ENST00000550872 SPIBQ01892 262 aa14.41□□□□□ -0.1
CHMP1A-209ENST00000550872 FGD3Q5JSP0 725 aa14.41□□□□□ -0.1
CHMP1A-209ENST00000550872 ZNF474Q6S9Z5 364 aaPredicted RBP14.41□□□□□ -0.1
CHMP1A-209ENST00000550872 ZNF730Q6ZMV8 503 aa14.41□□□□□ -0.1
CHMP1A-209ENST00000550872 HIST3H2AQ7L7L0 130 aa14.41□□□□□ -0.1
CHMP1A-209ENST00000550872 RRM2BQ7LG56 351 aa14.41□□□□□ -0.1
CHMP1A-209ENST00000550872 PIWIL3Q7Z3Z3 882 aaKnown RBP14.41□□□□□ -0.1
CHMP1A-209ENST00000550872 STK32CQ86UX6 486 aa14.41□□□□□ -0.1
CHMP1A-209ENST00000550872 SPATA24Q86W54 205 aa14.41□□□□□ -0.1
CHMP1A-209ENST00000550872 ZNF100Q8IYN0 542 aa14.41□□□□□ -0.1
CHMP1A-209ENST00000550872 SCAIQ8N9R8 606 aa14.41□□□□□ -0.1
CHMP1A-209ENST00000550872 OR5J2Q8NH18 312 aa14.41□□□□□ -0.1
CHMP1A-209ENST00000550872 ACOT11Q8WXI4 607 aaPredicted RBP14.41□□□□□ -0.1
CHMP1A-209ENST00000550872 HIST1H2ACQ93077 130 aa14.41□□□□□ -0.1
CHMP1A-209ENST00000550872 OXGR1Q96P68 337 aa14.41□□□□□ -0.1
CHMP1A-209ENST00000550872 ZNF347Q96SE7 839 aa14.41□□□□□ -0.1
CHMP1A-209ENST00000550872 MAGIXQ9H6Y5 334 aa14.41□□□□□ -0.1
CHMP1A-209ENST00000550872 FKRPQ9H9S5 495 aa14.41□□□□□ -0.1
CHMP1A-209ENST00000550872 C20orf141Q9NUB4 165 aa14.41□□□□□ -0.1
CHMP1A-209ENST00000550872 MRPL39Q9NYK5 338 aaKnown RBP14.41□□□□□ -0.1
CHMP1A-209ENST00000550872 FOXD3Q9UJU5 478 aaPredicted RBP14.41□□□□□ -0.1
CHMP1A-209ENST00000550872 TESMINQ9Y4I5 508 aa14.41□□□□□ -0.1
CHMP1A-209ENST00000550872 FLVCR1Q9Y5Y0 555 aa14.41□□□□□ -0.1
CHMP1A-209ENST00000550872 A0A1W2PRQ8 180 aa14.4□□□□□ -0.1
CHMP1A-209ENST00000550872 MS4A18H0YCH9 400 aa14.4□□□□□ -0.1
CHMP1A-209ENST00000550872 MRPL33O75394 65 aaKnown RBP14.4□□□□□ -0.1
CHMP1A-209ENST00000550872 OR7A10O76100 309 aa14.4□□□□□ -0.1
CHMP1A-209ENST00000550872 OR6A2O95222 327 aa14.4□□□□□ -0.1
CHMP1A-209ENST00000550872 IGF2P01344 180 aa14.4□□□□□ -0.1
CHMP1A-209ENST00000550872 ZNF43P17038 809 aa14.4□□□□□ -0.1
CHMP1A-209ENST00000550872 FUT1P19526 365 aa14.4□□□□□ -0.1
CHMP1A-209ENST00000550872 COL8A1P27658 744 aa14.4□□□□□ -0.1
CHMP1A-209ENST00000550872 LSM11P83369 360 aaKnown RBP eCLIP14.4□□□□□ -0.1
CHMP1A-209ENST00000550872 C1DQ13901 141 aaKnown RBP14.4□□□□□ -0.1
CHMP1A-209ENST00000550872 DGCR6Q14129 220 aa14.4□□□□□ -0.1
CHMP1A-209ENST00000550872 EXOC3L2Q2M3D2 409 aa14.4□□□□□ -0.1
CHMP1A-209ENST00000550872 MS4A18Q3C1V0 323 aa14.4□□□□□ -0.1
CHMP1A-209ENST00000550872 PODNL1Q6PEZ8 512 aa14.4□□□□□ -0.1
CHMP1A-209ENST00000550872 TBPL2Q6SJ96 375 aa14.4□□□□□ -0.1
CHMP1A-209ENST00000550872 ASRGL1Q7L266 308 aa14.4□□□□□ -0.1
CHMP1A-209ENST00000550872 SLC46A3Q7Z3Q1 461 aa14.4□□□□□ -0.1
CHMP1A-209ENST00000550872 NRMQ8IXM6 262 aa14.4□□□□□ -0.1
CHMP1A-209ENST00000550872 RNF113BQ8IZP6 322 aaKnown RBP14.4□□□□□ -0.1
CHMP1A-209ENST00000550872 LRRC17Q8N6Y2 441 aa14.4□□□□□ -0.1
CHMP1A-209ENST00000550872 ADPRHL1Q8NDY3 354 aa14.4□□□□□ -0.1
CHMP1A-209ENST00000550872 OR52J3Q8NH60 311 aa14.4□□□□□ -0.1
CHMP1A-209ENST00000550872 SLC7A13Q8TCU3 470 aa14.4□□□□□ -0.1
CHMP1A-209ENST00000550872 NPDC1Q9NQX5 325 aaPredicted RBP14.4□□□□□ -0.1
CHMP1A-209ENST00000550872 PARPBPQ9NWS1 579 aa14.4□□□□□ -0.1
CHMP1A-209ENST00000550872 GALNT8Q9NY28 637 aa14.4□□□□□ -0.1
CHMP1A-209ENST00000550872 ZNF229Q9UJW7 825 aa14.4□□□□□ -0.1
CHMP1A-209ENST00000550872 AURKCQ9UQB9 309 aa14.4□□□□□ -0.1
CHMP1A-209ENST00000550872 PKDREJQ9NTG1 2253 aa14.4□□□□□ -0.1
CHMP1A-209ENST00000550872 ALPK2Q86TB3 2170 aa14.4□□□□□ -0.1
CHMP1A-209ENST00000550872 CENPEQ02224 2701 aa14.39□□□□□ -0.11
CHMP1A-209ENST00000550872 TRBV4-1A0A0J9YWV2 114 aa14.39□□□□□ -0.11
CHMP1A-209ENST00000550872 HTR3EA5X5Y0 456 aa14.39□□□□□ -0.11
CHMP1A-209ENST00000550872 PLPP3O14495 311 aa14.39□□□□□ -0.11
CHMP1A-209ENST00000550872 GADD45GO95257 159 aa14.39□□□□□ -0.11
CHMP1A-209ENST00000550872 ADORA3P0DMS8 318 aa14.39□□□□□ -0.11
CHMP1A-209ENST00000550872 AHCYP23526 432 aa14.39□□□□□ -0.11
CHMP1A-209ENST00000550872 NTF4P34130 210 aa14.39□□□□□ -0.11
CHMP1A-209ENST00000550872 OR3A2P47893 321 aa14.39□□□□□ -0.11
CHMP1A-209ENST00000550872 ERFP50548 548 aa14.39□□□□□ -0.11
CHMP1A-209ENST00000550872 POU4F3Q15319 338 aa14.39□□□□□ -0.11
CHMP1A-209ENST00000550872 CASP12Q6UXS9 341 aa14.39□□□□□ -0.11
CHMP1A-209ENST00000550872 TFAP2EQ6VUC0 442 aa14.39□□□□□ -0.11
CHMP1A-209ENST00000550872 BEND4Q6ZU67 534 aa14.39□□□□□ -0.11
CHMP1A-209ENST00000550872 MBOAT2Q6ZWT7 520 aa14.39□□□□□ -0.11
CHMP1A-209ENST00000550872 CREB3L2Q70SY1 520 aa14.39□□□□□ -0.11
CHMP1A-209ENST00000550872 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.39□□□□□ -0.11
CHMP1A-209ENST00000550872 NANOGNBQ7Z5D8 188 aa14.39□□□□□ -0.11
CHMP1A-209ENST00000550872 KIF18BQ86Y91 864 aa14.39□□□□□ -0.11
CHMP1A-209ENST00000550872 EPHX4Q8IUS5 362 aa14.39□□□□□ -0.11
CHMP1A-209ENST00000550872 ADGRG5Q8IZF4 528 aa14.39□□□□□ -0.11
CHMP1A-209ENST00000550872 CDK20Q8IZL9 346 aa14.39□□□□□ -0.11
CHMP1A-209ENST00000550872 ZIC4Q8N9L1 334 aa14.39□□□□□ -0.11
CHMP1A-209ENST00000550872 CANT1Q8WVQ1 401 aa14.39□□□□□ -0.11
CHMP1A-209ENST00000550872 APH1AQ96BI3 265 aa14.39□□□□□ -0.11
CHMP1A-209ENST00000550872 BPIFA2Q96DR5 249 aa14.39□□□□□ -0.11
CHMP1A-209ENST00000550872 DHRS1Q96LJ7 313 aa14.39□□□□□ -0.11
CHMP1A-209ENST00000550872 ZNF385AQ96PM9 386 aaKnown RBP14.39□□□□□ -0.11
CHMP1A-209ENST00000550872 FANCFQ9NPI8 374 aa14.39□□□□□ -0.11
CHMP1A-209ENST00000550872 ELOVL5Q9NYP7 299 aa14.39□□□□□ -0.11
CHMP1A-209ENST00000550872 LOC102725191A0A1B0GVB3 256 aa14.38□□□□□ -0.11
CHMP1A-209ENST00000550872 DHRS12A0PJE2 317 aa14.38□□□□□ -0.11
CHMP1A-209ENST00000550872 C11orf98E9PRG8 122 aa14.38□□□□□ -0.11
CHMP1A-209ENST00000550872 BLOC1S5-TXNDC5H3BN57 136 aa14.38□□□□□ -0.11
CHMP1A-209ENST00000550872 HPRP00739 348 aa14.38□□□□□ -0.11
CHMP1A-209ENST00000550872 ASAH2BP0C7U1 165 aa14.38□□□□□ -0.11
CHMP1A-209ENST00000550872 RAP2AP10114 183 aa14.38□□□□□ -0.11
CHMP1A-209ENST00000550872 POU2F1P14859 743 aa14.38□□□□□ -0.11
CHMP1A-209ENST00000550872 EDNRAP25101 427 aa14.38□□□□□ -0.11
CHMP1A-209ENST00000550872 RRM2P31350 389 aa14.38□□□□□ -0.11
CHMP1A-209ENST00000550872 CD79BP40259 229 aa14.38□□□□□ -0.11
CHMP1A-209ENST00000550872 MAGEA2P43356 314 aa14.38□□□□□ -0.11
CHMP1A-209ENST00000550872 PRKCDQ05655 676 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms