RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 ST3GAL2Q16842 350 aa9.43□□□□□ -0.9
SMARCC2-209ENST00000550164 ZXDCQ2QGD7 858 aaPredicted RBP9.43□□□□□ -0.9
SMARCC2-209ENST00000550164 FBXO42Q6P3S6 717 aa9.43□□□□□ -0.9
SMARCC2-209ENST00000550164 TTLL10Q6ZVT0 673 aa9.43□□□□□ -0.9
SMARCC2-209ENST00000550164 NLRC3Q7RTR2 1065 aa9.43□□□□□ -0.9
SMARCC2-209ENST00000550164 PLPP6Q8IY26 295 aa9.43□□□□□ -0.9
SMARCC2-209ENST00000550164 ZNF440Q8IYI8 595 aa9.43□□□□□ -0.9
SMARCC2-209ENST00000550164 PM20D2Q8IYS1 436 aa9.43□□□□□ -0.9
SMARCC2-209ENST00000550164 SLC38A6Q8IZM9 456 aa9.43□□□□□ -0.9
SMARCC2-209ENST00000550164 SCARB1Q8WTV0 552 aa9.43□□□□□ -0.9
SMARCC2-209ENST00000550164 ZNF296Q8WUU4 475 aaPredicted RBP9.43□□□□□ -0.9
SMARCC2-209ENST00000550164 PMM1Q92871 262 aa9.43□□□□□ -0.9
SMARCC2-209ENST00000550164 PPIL1Q9Y3C6 166 aa9.43□□□□□ -0.9
SMARCC2-209ENST00000550164 E9PI62 339 aa9.43□□□□□ -0.9
SMARCC2-209ENST00000550164 ZNF208O43345 1280 aa9.43□□□□□ -0.9
SMARCC2-209ENST00000550164 SLC2A5P22732 501 aa9.43□□□□□ -0.9
SMARCC2-209ENST00000550164 CTGFP29279 349 aa9.43□□□□□ -0.9
SMARCC2-209ENST00000550164 SLC6A1P30531 599 aa9.43□□□□□ -0.9
SMARCC2-209ENST00000550164 LUMP51884 338 aaPredicted RBP9.43□□□□□ -0.9
SMARCC2-209ENST00000550164 BDH1Q02338 343 aa9.43□□□□□ -0.9
SMARCC2-209ENST00000550164 ZNF616Q08AN1 781 aa9.43□□□□□ -0.9
SMARCC2-209ENST00000550164 CAMK2BQ13554 666 aa9.43□□□□□ -0.9
SMARCC2-209ENST00000550164 CDKN3Q16667 212 aa9.43□□□□□ -0.9
SMARCC2-209ENST00000550164 LIPNQ5VXI9 398 aa9.43□□□□□ -0.9
SMARCC2-209ENST00000550164 STEAP1BQ6NZ63 245 aa9.43□□□□□ -0.9
SMARCC2-209ENST00000550164 ADAMTSL4Q6UY14 1074 aa9.43□□□□□ -0.9
SMARCC2-209ENST00000550164 OR5T3Q8NGG3 340 aa9.43□□□□□ -0.9
SMARCC2-209ENST00000550164 ADOQ96SZ5 270 aa9.43□□□□□ -0.9
SMARCC2-209ENST00000550164 GPA33Q99795 319 aa9.43□□□□□ -0.9
SMARCC2-209ENST00000550164 RNF32Q9H0A6 362 aa9.43□□□□□ -0.9
SMARCC2-209ENST00000550164 TSPAN10Q9H1Z9 355 aaPredicted RBP9.43□□□□□ -0.9
SMARCC2-209ENST00000550164 ZNF726A6NNF4 738 aa9.42□□□□□ -0.9
SMARCC2-209ENST00000550164 TLX3O43711 291 aaPredicted RBP9.42□□□□□ -0.9
SMARCC2-209ENST00000550164 KCNJ13O60928 360 aa9.42□□□□□ -0.9
SMARCC2-209ENST00000550164 WNT1P04628 370 aa9.42□□□□□ -0.9
SMARCC2-209ENST00000550164 GIPP09681 153 aaPredicted RBP9.42□□□□□ -0.9
SMARCC2-209ENST00000550164 IFNGR1P15260 489 aa9.42□□□□□ -0.9
SMARCC2-209ENST00000550164 AMY2BP19961 511 aa9.42□□□□□ -0.9
SMARCC2-209ENST00000550164 RAB5BP61020 215 aa9.42□□□□□ -0.9
SMARCC2-209ENST00000550164 EIF2B1Q14232 305 aaKnown RBP9.42□□□□□ -0.9
SMARCC2-209ENST00000550164 ZNF585AQ6P3V2 769 aa9.42□□□□□ -0.9
SMARCC2-209ENST00000550164 ZNF793Q6ZN11 406 aa9.42□□□□□ -0.9
SMARCC2-209ENST00000550164 NDUFAF7Q7L592 441 aa9.42□□□□□ -0.9
SMARCC2-209ENST00000550164 MAMDC2Q7Z304 686 aaPredicted RBP9.42□□□□□ -0.9
SMARCC2-209ENST00000550164 SLC51BQ86UW2 128 aa9.42□□□□□ -0.9
SMARCC2-209ENST00000550164 PXT1Q8NFP0 134 aa9.42□□□□□ -0.9
SMARCC2-209ENST00000550164 OR52B4Q8NGK2 314 aa9.42□□□□□ -0.9
SMARCC2-209ENST00000550164 OR2A1Q8NGT9 310 aa9.42□□□□□ -0.9
SMARCC2-209ENST00000550164 ZNF587Q96SQ5 575 aaPredicted RBP9.42□□□□□ -0.9
SMARCC2-209ENST00000550164 SIRT3Q9NTG7 399 aaPredicted RBP9.42□□□□□ -0.9
SMARCC2-209ENST00000550164 SCN3AQ9NY46 2000 aa9.42□□□□□ -0.9
SMARCC2-209ENST00000550164 MEGF11A6BM72 1044 aa9.42□□□□□ -0.9
SMARCC2-209ENST00000550164 NPIPB8E9PQR5 432 aa9.42□□□□□ -0.9
SMARCC2-209ENST00000550164 PHYHO14832 338 aa9.42□□□□□ -0.9
SMARCC2-209ENST00000550164 RORAP35398 523 aa9.42□□□□□ -0.9
SMARCC2-209ENST00000550164 PLCXD2Q0VAA5 305 aa9.42□□□□□ -0.9
SMARCC2-209ENST00000550164 DYRK1AQ13627 763 aa9.42□□□□□ -0.9
SMARCC2-209ENST00000550164 CBFBQ13951 182 aa9.42□□□□□ -0.9
SMARCC2-209ENST00000550164 CDK5R1Q15078 307 aa9.42□□□□□ -0.9
SMARCC2-209ENST00000550164 KRBOX4Q5JUW0 171 aa9.42□□□□□ -0.9
SMARCC2-209ENST00000550164 UNQ6126/PRO20091Q6UXV3 157 aa9.42□□□□□ -0.9
SMARCC2-209ENST00000550164 FBXL6Q8N531 539 aa9.42□□□□□ -0.9
SMARCC2-209ENST00000550164 C17orf47Q8NEP4 570 aa9.42□□□□□ -0.9
SMARCC2-209ENST00000550164 DIO2Q92813 273 aa9.42□□□□□ -0.9
SMARCC2-209ENST00000550164 SMIM19Q96E16 107 aa9.42□□□□□ -0.9
SMARCC2-209ENST00000550164 CNTNAP3BQ96NU0 1288 aa9.42□□□□□ -0.9
SMARCC2-209ENST00000550164 NECAB3Q96P71 396 aaPredicted RBP9.42□□□□□ -0.9
SMARCC2-209ENST00000550164 TSSK2Q96PF2 358 aa9.42□□□□□ -0.9
SMARCC2-209ENST00000550164 PRSS38A1L453 326 aa9.42□□□□□ -0.9
SMARCC2-209ENST00000550164 IFITM5A6NNB3 132 aa9.42□□□□□ -0.9
SMARCC2-209ENST00000550164 LEUTXA8MZ59 168 aa9.42□□□□□ -0.9
SMARCC2-209ENST00000550164 GPR89AB7ZAQ6 455 aa9.42□□□□□ -0.9
SMARCC2-209ENST00000550164 SEMG1P04279 462 aa9.42□□□□□ -0.9
SMARCC2-209ENST00000550164 GPR89BP0CG08 455 aa9.42□□□□□ -0.9
SMARCC2-209ENST00000550164 PNMTP11086 282 aa9.42□□□□□ -0.9
SMARCC2-209ENST00000550164 POU3F3P20264 500 aaPredicted RBP9.42□□□□□ -0.9
SMARCC2-209ENST00000550164 ITGB8P26012 769 aa9.42□□□□□ -0.9
SMARCC2-209ENST00000550164 POU3F4P49335 361 aa9.42□□□□□ -0.9
SMARCC2-209ENST00000550164 NKAPLQ5M9Q1 402 aa9.42□□□□□ -0.9
SMARCC2-209ENST00000550164 AADACL4Q5VUY2 407 aa9.42□□□□□ -0.9
SMARCC2-209ENST00000550164 VASNQ6EMK4 673 aa9.42□□□□□ -0.9
SMARCC2-209ENST00000550164 SMIM4Q8WVI0 70 aa9.42□□□□□ -0.9
SMARCC2-209ENST00000550164 HRH4Q9H3N8 390 aa9.42□□□□□ -0.9
SMARCC2-209ENST00000550164 MAN2C1Q9NTJ4 1040 aa9.42□□□□□ -0.9
SMARCC2-209ENST00000550164 APOBEC3BQ9UH17 382 aaKnown RBP9.42□□□□□ -0.9
SMARCC2-209ENST00000550164 FBXL4Q9UKA2 621 aa9.42□□□□□ -0.9
SMARCC2-209ENST00000550164 PRAMEF25A6NGN4 478 aa9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 RFXAPO00287 272 aa9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 CCSO14618 274 aa9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 LANCL1O43813 399 aa9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 MPIG6BO95866 241 aa9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 KNG1P01042 644 aa9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 CSTBP04080 98 aaKnown RBP9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 PCBP4P57723 403 aaKnown RBP9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 TAS2R20P59543 309 aa9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 RPS27AP62979 156 aaKnown RBP9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 UBA52P62987 128 aaKnown RBP9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 ALKBH1Q13686 389 aaKnown RBP9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 AWAT2Q6E213 333 aa9.41□□□□□ -0.9
SMARCC2-209ENST00000550164 OVCH1Q7RTY7 1134 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms