RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 CBR1P16152 277 aa11.77□□□□□ -0.53
TROAP-211ENST00000549891 APEX1P27695 318 aaKnown RBP11.77□□□□□ -0.53
TROAP-211ENST00000549891 CALCRP30988 508 aa11.77□□□□□ -0.53
TROAP-211ENST00000549891 ARR3P36575 388 aa11.77□□□□□ -0.53
TROAP-211ENST00000549891 SRP14P37108 136 aaKnown RBP11.77□□□□□ -0.53
TROAP-211ENST00000549891 CRATP43155 626 aa11.77□□□□□ -0.53
TROAP-211ENST00000549891 TUBA1BP68363 451 aa11.77□□□□□ -0.53
TROAP-211ENST00000549891 TUBA4AP68366 448 aa11.77□□□□□ -0.53
TROAP-211ENST00000549891 LGALS3BPQ08380 585 aa11.77□□□□□ -0.53
TROAP-211ENST00000549891 STX3Q13277 289 aa11.77□□□□□ -0.53
TROAP-211ENST00000549891 TUBA1AQ71U36 451 aa11.77□□□□□ -0.53
TROAP-211ENST00000549891 LINGO2Q7L985 606 aa11.77□□□□□ -0.53
TROAP-211ENST00000549891 SPATA21Q7Z572 469 aa11.77□□□□□ -0.53
TROAP-211ENST00000549891 CCDC36Q8IYA8 594 aa11.77□□□□□ -0.53
TROAP-211ENST00000549891 ZNF786Q8N393 782 aa11.77□□□□□ -0.53
TROAP-211ENST00000549891 LINC01356Q8N9X3 169 aa11.77□□□□□ -0.53
TROAP-211ENST00000549891 TMEM109Q9BVC6 243 aa11.77□□□□□ -0.53
TROAP-211ENST00000549891 THUMPD1Q9NXG2 353 aaKnown RBP11.77□□□□□ -0.53
TROAP-211ENST00000549891 TMEM229AB2RXF0 380 aa11.76□□□□□ -0.53
TROAP-211ENST00000549891 RGS16O15492 202 aaPredicted RBP11.76□□□□□ -0.53
TROAP-211ENST00000549891 AKAP8O43823 692 aaKnown RBP11.76□□□□□ -0.53
TROAP-211ENST00000549891 ANP32DO95626 131 aa11.76□□□□□ -0.53
TROAP-211ENST00000549891 BCHEP06276 602 aa11.76□□□□□ -0.53
TROAP-211ENST00000549891 ALDOCP09972 364 aaKnown RBP11.76□□□□□ -0.53
TROAP-211ENST00000549891 PNMTP11086 282 aa11.76□□□□□ -0.53
TROAP-211ENST00000549891 THBS4P35443 961 aa11.76□□□□□ -0.53
TROAP-211ENST00000549891 CLDN17P56750 224 aa11.76□□□□□ -0.53
TROAP-211ENST00000549891 DSTNP60981 165 aa11.76□□□□□ -0.53
TROAP-211ENST00000549891 VSNL1P62760 191 aa11.76□□□□□ -0.53
TROAP-211ENST00000549891 ARF1P84077 181 aaKnown RBP11.76□□□□□ -0.53
TROAP-211ENST00000549891 KRT71Q3SY84 523 aa11.76□□□□□ -0.53
TROAP-211ENST00000549891 GPR137CQ8N3F9 429 aa11.76□□□□□ -0.53
TROAP-211ENST00000549891 SVOPLQ8N434 492 aa11.76□□□□□ -0.53
TROAP-211ENST00000549891 UBASH3BQ8TF42 649 aa11.76□□□□□ -0.53
TROAP-211ENST00000549891 SLC25A36Q96CQ1 311 aa11.76□□□□□ -0.53
TROAP-211ENST00000549891 DOK1Q99704 481 aa11.76□□□□□ -0.53
TROAP-211ENST00000549891 SOX7Q9BT81 388 aa11.76□□□□□ -0.53
TROAP-211ENST00000549891 SPATA9Q9BWV2 254 aa11.76□□□□□ -0.53
TROAP-211ENST00000549891 NELFAQ9H3P2 528 aa11.76□□□□□ -0.53
TROAP-211ENST00000549891 IFT52Q9Y366 437 aa11.76□□□□□ -0.53
TROAP-211ENST00000549891 A0A0G2JPF8 293 aa11.75□□□□□ -0.53
TROAP-211ENST00000549891 TRPC5OSA6NMA1 111 aa11.75□□□□□ -0.53
TROAP-211ENST00000549891 HNRNPCL2B2RXH8 293 aa11.75□□□□□ -0.53
TROAP-211ENST00000549891 HNRNPCL3B7ZW38 293 aa11.75□□□□□ -0.53
TROAP-211ENST00000549891 OR2T1O43869 369 aa11.75□□□□□ -0.53
TROAP-211ENST00000549891 HNRNPCL1O60812 293 aaKnown RBP11.75□□□□□ -0.53
TROAP-211ENST00000549891 LILRA1O75019 489 aa11.75□□□□□ -0.53
TROAP-211ENST00000549891 ZCCHC18P0CG32 403 aa11.75□□□□□ -0.53
TROAP-211ENST00000549891 HNRNPCL4P0DMR1 293 aa11.75□□□□□ -0.53
TROAP-211ENST00000549891 IFNGR1P15260 489 aa11.75□□□□□ -0.53
TROAP-211ENST00000549891 IL12AP29459 219 aa11.75□□□□□ -0.53
TROAP-211ENST00000549891 RPS5P46782 204 aaKnown RBP11.75□□□□□ -0.53
TROAP-211ENST00000549891 CDH15P55291 814 aa11.75□□□□□ -0.53
TROAP-211ENST00000549891 POU3F1Q03052 451 aaPredicted RBP11.75□□□□□ -0.53
TROAP-211ENST00000549891 HGFACQ04756 655 aa11.75□□□□□ -0.53
TROAP-211ENST00000549891 NPRL3Q12980 569 aa11.75□□□□□ -0.53
TROAP-211ENST00000549891 C1DQ13901 141 aaKnown RBP11.75□□□□□ -0.53
TROAP-211ENST00000549891 DAG1Q14118 895 aa11.75□□□□□ -0.53
TROAP-211ENST00000549891 MAPK11Q15759 364 aa11.75□□□□□ -0.53
TROAP-211ENST00000549891 ADRM1Q16186 407 aa11.75□□□□□ -0.53
TROAP-211ENST00000549891 ATG16L1Q676U5 607 aa11.75□□□□□ -0.53
TROAP-211ENST00000549891 C5orf46Q6UWT4 87 aa11.75□□□□□ -0.53
TROAP-211ENST00000549891 CLIP4Q8N3C7 705 aa11.75□□□□□ -0.53
TROAP-211ENST00000549891 PIK3C3Q8NEB9 887 aa11.75□□□□□ -0.53
TROAP-211ENST00000549891 SLC38A5Q8WUX1 472 aa11.75□□□□□ -0.53
TROAP-211ENST00000549891 CKAP2Q8WWK9 683 aa11.75□□□□□ -0.53
TROAP-211ENST00000549891 SLC35B4Q969S0 331 aa11.75□□□□□ -0.53
TROAP-211ENST00000549891 OXGR1Q96P68 337 aa11.75□□□□□ -0.53
TROAP-211ENST00000549891 SNX18Q96RF0 628 aa11.75□□□□□ -0.53
TROAP-211ENST00000549891 RMND5AQ9H871 391 aa11.75□□□□□ -0.53
TROAP-211ENST00000549891 SEC61A2Q9H9S3 476 aa11.75□□□□□ -0.53
TROAP-211ENST00000549891 GPR35Q9HC97 309 aa11.75□□□□□ -0.53
TROAP-211ENST00000549891 RPS6KB2Q9UBS0 482 aa11.75□□□□□ -0.53
TROAP-211ENST00000549891 USP22Q9UPT9 525 aa11.75□□□□□ -0.53
TROAP-211ENST00000549891 CMAHPQ9Y471 501 aa11.75□□□□□ -0.53
TROAP-211ENST00000549891 GPR45Q9Y5Y3 372 aa11.75□□□□□ -0.53
TROAP-211ENST00000549891 IGHV2OR16-5A0A0B4J2B6 119 aa11.74□□□□□ -0.53
TROAP-211ENST00000549891 SH3PXD2BA1X283 911 aa11.74□□□□□ -0.53
TROAP-211ENST00000549891 ZNF99A8MXY4 864 aaPredicted RBP11.74□□□□□ -0.53
TROAP-211ENST00000549891 FTCDNL1E5RQL4 147 aa11.74□□□□□ -0.53
TROAP-211ENST00000549891 AIM2O14862 343 aa11.74□□□□□ -0.53
TROAP-211ENST00000549891 ZNF432O94892 652 aa11.74□□□□□ -0.53
TROAP-211ENST00000549891 CELA3BP08861 270 aa11.74□□□□□ -0.53
TROAP-211ENST00000549891 PRG2P13727 222 aa11.74□□□□□ -0.53
TROAP-211ENST00000549891 ETFAP13804 333 aa11.74□□□□□ -0.53
TROAP-211ENST00000549891 IDO1P14902 403 aa11.74□□□□□ -0.53
TROAP-211ENST00000549891 BGNP21810 368 aa11.74□□□□□ -0.53
TROAP-211ENST00000549891 CAPZA2P47755 286 aa11.74□□□□□ -0.53
TROAP-211ENST00000549891 MVDP53602 400 aa11.74□□□□□ -0.53
TROAP-211ENST00000549891 DVL1P1P54792 670 aaPredicted RBP11.74□□□□□ -0.53
TROAP-211ENST00000549891 SCGB2A2Q13296 93 aa11.74□□□□□ -0.53
TROAP-211ENST00000549891 SNTB2Q13425 540 aaKnown RBP11.74□□□□□ -0.53
TROAP-211ENST00000549891 RIN1Q13671 783 aa11.74□□□□□ -0.53
TROAP-211ENST00000549891 CEACAM16Q2WEN9 425 aa11.74□□□□□ -0.53
TROAP-211ENST00000549891 ZNF311Q5JNZ3 666 aa11.74□□□□□ -0.53
TROAP-211ENST00000549891 FAM69AQ5T7M9 428 aa11.74□□□□□ -0.53
TROAP-211ENST00000549891 NET1Q7Z628 596 aaPredicted RBP11.74□□□□□ -0.53
TROAP-211ENST00000549891 SERPINA11Q86U17 422 aa11.74□□□□□ -0.53
TROAP-211ENST00000549891 LSRQ86X29 649 aaPredicted RBP11.74□□□□□ -0.53
TROAP-211ENST00000549891 KDM8Q8N371 416 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms