RNA–Protein interactions for RNA: ENST00000549815.1

GCN1-206, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-206ENST00000549815 TMEM38AQ9H6F2 299 aa11.72□□□□□ -0.53
GCN1-206ENST00000549815 FKRPQ9H9S5 495 aa11.72□□□□□ -0.53
GCN1-206ENST00000549815 CRNNQ9UBG3 495 aaPredicted RBP11.72□□□□□ -0.53
GCN1-206ENST00000549815 ATP23Q9Y6H3 246 aa11.72□□□□□ -0.53
GCN1-206ENST00000549815 OR6C65A6NJZ3 312 aa11.71□□□□□ -0.53
GCN1-206ENST00000549815 ELOA3DA6NLF2 546 aaPredicted RBP11.71□□□□□ -0.53
GCN1-206ENST00000549815 ZNF587BE7ETH6 402 aa11.71□□□□□ -0.53
GCN1-206ENST00000549815 RPL36A-HNRNPH2H7BZ11 118 aa11.71□□□□□ -0.53
GCN1-206ENST00000549815 TPST2O60704 377 aa11.71□□□□□ -0.53
GCN1-206ENST00000549815 CDH2P19022 906 aaPredicted RBP11.71□□□□□ -0.53
GCN1-206ENST00000549815 PPIBP23284 216 aaKnown RBP11.71□□□□□ -0.53
GCN1-206ENST00000549815 NUDT6P53370 316 aa11.71□□□□□ -0.53
GCN1-206ENST00000549815 SWI5Q1ZZU3 235 aa11.71□□□□□ -0.53
GCN1-206ENST00000549815 ELOA3BQ3SY89 546 aa11.71□□□□□ -0.53
GCN1-206ENST00000549815 FAM69AQ5T7M9 428 aa11.71□□□□□ -0.53
GCN1-206ENST00000549815 REEP3Q6NUK4 255 aa11.71□□□□□ -0.53
GCN1-206ENST00000549815 DLEU7Q6UYE1 221 aa11.71□□□□□ -0.53
GCN1-206ENST00000549815 ELOA3Q8NG57 546 aa11.71□□□□□ -0.53
GCN1-206ENST00000549815 STON2Q8WXE9 905 aa11.71□□□□□ -0.53
GCN1-206ENST00000549815 SLC38A2Q96QD8 506 aa11.71□□□□□ -0.53
GCN1-206ENST00000549815 MDFIQ99750 246 aa11.71□□□□□ -0.53
GCN1-206ENST00000549815 RHNO1Q9BSD3 238 aa11.71□□□□□ -0.53
GCN1-206ENST00000549815 MOKQ9UQ07 419 aa11.71□□□□□ -0.53
GCN1-206ENST00000549815 RCE1Q9Y256 329 aa11.71□□□□□ -0.53
GCN1-206ENST00000549815 A0A0B4J2E0 115 aa11.7□□□□□ -0.54
GCN1-206ENST00000549815 LOC102725191A0A1B0GVB3 256 aa11.7□□□□□ -0.54
GCN1-206ENST00000549815 A0A1B0GX12 115 aa11.7□□□□□ -0.54
GCN1-206ENST00000549815 M0R082 166 aa11.7□□□□□ -0.54
GCN1-206ENST00000549815 TLX2O43763 284 aaPredicted RBP11.7□□□□□ -0.54
GCN1-206ENST00000549815 OR2T1O43869 369 aa11.7□□□□□ -0.54
GCN1-206ENST00000549815 GPRIN2O60269 458 aa11.7□□□□□ -0.54
GCN1-206ENST00000549815 IGLV1-44P01699 117 aa11.7□□□□□ -0.54
GCN1-206ENST00000549815 ZNF43P17038 809 aa11.7□□□□□ -0.54
GCN1-206ENST00000549815 GRPRP30550 384 aa11.7□□□□□ -0.54
GCN1-206ENST00000549815 CLDN17P56750 224 aa11.7□□□□□ -0.54
GCN1-206ENST00000549815 DSCR9P59020 149 aa11.7□□□□□ -0.54
GCN1-206ENST00000549815 SCARB2Q14108 478 aa11.7□□□□□ -0.54
GCN1-206ENST00000549815 SQLEQ14534 574 aa11.7□□□□□ -0.54
GCN1-206ENST00000549815 RAB35Q15286 201 aa11.7□□□□□ -0.54
GCN1-206ENST00000549815 C3orf36Q3SXR2 165 aa11.7□□□□□ -0.54
GCN1-206ENST00000549815 AGKQ53H12 422 aa11.7□□□□□ -0.54
GCN1-206ENST00000549815 RUNDC3AQ59EK9 446 aa11.7□□□□□ -0.54
GCN1-206ENST00000549815 FAM91A1Q658Y4 838 aa11.7□□□□□ -0.54
GCN1-206ENST00000549815 KLHL24Q6TFL4 600 aa11.7□□□□□ -0.54
GCN1-206ENST00000549815 C5orf46Q6UWT4 87 aa11.7□□□□□ -0.54
GCN1-206ENST00000549815 NHLRC1Q6VVB1 395 aa11.7□□□□□ -0.54
GCN1-206ENST00000549815 ZNF525Q8N782 197 aa11.7□□□□□ -0.54
GCN1-206ENST00000549815 ANKK1Q8NFD2 765 aa11.7□□□□□ -0.54
GCN1-206ENST00000549815 OR6S1Q8NH40 331 aa11.7□□□□□ -0.54
GCN1-206ENST00000549815 ZNF417Q8TAU3 575 aa11.7□□□□□ -0.54
GCN1-206ENST00000549815 DNAJA4Q8WW22 397 aaPredicted RBP11.7□□□□□ -0.54
GCN1-206ENST00000549815 SLC38A4Q969I6 547 aa11.7□□□□□ -0.54
GCN1-206ENST00000549815 SLC41A3Q96GZ6 507 aa11.7□□□□□ -0.54
GCN1-206ENST00000549815 OXGR1Q96P68 337 aa11.7□□□□□ -0.54
GCN1-206ENST00000549815 ZNF317Q96PQ6 595 aaPredicted RBP11.7□□□□□ -0.54
GCN1-206ENST00000549815 ZNF587Q96SQ5 575 aaPredicted RBP11.7□□□□□ -0.54
GCN1-206ENST00000549815 CPPED1Q9BRF8 314 aaPredicted RBP11.7□□□□□ -0.54
GCN1-206ENST00000549815 SPATA5L1Q9BVQ7 753 aa11.7□□□□□ -0.54
GCN1-206ENST00000549815 ZNF385DQ9H6B1 395 aa11.7□□□□□ -0.54
GCN1-206ENST00000549815 KLHL14Q9P2G3 628 aa11.7□□□□□ -0.54
GCN1-206ENST00000549815 RPS6KB2Q9UBS0 482 aa11.7□□□□□ -0.54
GCN1-206ENST00000549815 TESQ9UGI8 421 aaKnown RBP11.7□□□□□ -0.54
GCN1-206ENST00000549815 ATRQ13535 2644 aa11.7□□□□□ -0.54
GCN1-206ENST00000549815 TRAV36DV7A0A075B6V5 113 aa11.69□□□□□ -0.54
GCN1-206ENST00000549815 A0A087WUJ7 227 aa11.69□□□□□ -0.54
GCN1-206ENST00000549815 MS4A18H0YCH9 400 aa11.69□□□□□ -0.54
GCN1-206ENST00000549815 AIM2O14862 343 aa11.69□□□□□ -0.54
GCN1-206ENST00000549815 TRAF3IP2O43734 574 aaPredicted RBP11.69□□□□□ -0.54
GCN1-206ENST00000549815 KRT33AO76009 404 aa11.69□□□□□ -0.54
GCN1-206ENST00000549815 MFN2O95140 757 aa11.69□□□□□ -0.54
GCN1-206ENST00000549815 IGKV3-15P01624 115 aa11.69□□□□□ -0.54
GCN1-206ENST00000549815 HOXB1P14653 301 aaPredicted RBP11.69□□□□□ -0.54
GCN1-206ENST00000549815 PAX7P23759 505 aa11.69□□□□□ -0.54
GCN1-206ENST00000549815 PCBP3P57721 371 aaKnown RBP11.69□□□□□ -0.54
GCN1-206ENST00000549815 TUBA1BP68363 451 aa11.69□□□□□ -0.54
GCN1-206ENST00000549815 TUBA4AP68366 448 aa11.69□□□□□ -0.54
GCN1-206ENST00000549815 ROR2Q01974 943 aaKnown RBP11.69□□□□□ -0.54
GCN1-206ENST00000549815 LOXL1Q08397 574 aaPredicted RBP11.69□□□□□ -0.54
GCN1-206ENST00000549815 OR1Q1Q15612 314 aa11.69□□□□□ -0.54
GCN1-206ENST00000549815 MS4A18Q3C1V0 323 aa11.69□□□□□ -0.54
GCN1-206ENST00000549815 ALG10BQ5I7T1 473 aa11.69□□□□□ -0.54
GCN1-206ENST00000549815 ANKRD16Q6P6B7 361 aa11.69□□□□□ -0.54
GCN1-206ENST00000549815 ULK3Q6PHR2 472 aa11.69□□□□□ -0.54
GCN1-206ENST00000549815 CLEC2AQ6UVW9 174 aa11.69□□□□□ -0.54
GCN1-206ENST00000549815 TUBA1AQ71U36 451 aa11.69□□□□□ -0.54
GCN1-206ENST00000549815 NET1Q7Z628 596 aaPredicted RBP11.69□□□□□ -0.54
GCN1-206ENST00000549815 KRT73Q86Y46 540 aa11.69□□□□□ -0.54
GCN1-206ENST00000549815 PTOV1Q86YD1 416 aa11.69□□□□□ -0.54
GCN1-206ENST00000549815 TMEM123Q8N131 208 aa11.69□□□□□ -0.54
GCN1-206ENST00000549815 FAM169BQ8N8A8 192 aa11.69□□□□□ -0.54
GCN1-206ENST00000549815 ADPRHL1Q8NDY3 354 aa11.69□□□□□ -0.54
GCN1-206ENST00000549815 NANOS1Q8WY41 292 aaKnown RBP11.69□□□□□ -0.54
GCN1-206ENST00000549815 ZNF837Q96EG3 531 aaPredicted RBP11.69□□□□□ -0.54
GCN1-206ENST00000549815 KATNB1Q9BVA0 655 aa11.69□□□□□ -0.54
GCN1-206ENST00000549815 SEC61A2Q9H9S3 476 aa11.69□□□□□ -0.54
GCN1-206ENST00000549815 CORO2BQ9UQ03 480 aa11.69□□□□□ -0.54
GCN1-206ENST00000549815 A0A096LPE4 126 aa11.68□□□□□ -0.54
GCN1-206ENST00000549815 A0A1W2PPZ6 126 aa11.68□□□□□ -0.54
GCN1-206ENST00000549815 ZNF503-AS2A6NEH8 195 aa11.68□□□□□ -0.54
GCN1-206ENST00000549815 HPRP00739 348 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms