RNA–Protein interactions for RNA: ENST00000547614.5

CHMP1A-203, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 653 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-203ENST00000547614 AIM2O14862 343 aa16.33■□□□□ 0.2
CHMP1A-203ENST00000547614 SMAD7O15105 426 aaKnown RBP16.33■□□□□ 0.2
CHMP1A-203ENST00000547614 AQP1P29972 269 aa16.33■□□□□ 0.2
CHMP1A-203ENST00000547614 TTKP33981 857 aa16.33■□□□□ 0.2
CHMP1A-203ENST00000547614 CDKN1AP38936 164 aa16.33■□□□□ 0.2
CHMP1A-203ENST00000547614 SELENOPP49908 381 aa16.33■□□□□ 0.2
CHMP1A-203ENST00000547614 DMTNQ08495 405 aa16.33■□□□□ 0.2
CHMP1A-203ENST00000547614 MFSD13AQ14CX5 517 aa16.33■□□□□ 0.2
CHMP1A-203ENST00000547614 CLEC12BQ2HXU8 276 aa16.33■□□□□ 0.2
CHMP1A-203ENST00000547614 NIPAL3Q6P499 406 aa16.33■□□□□ 0.2
CHMP1A-203ENST00000547614 KLHL24Q6TFL4 600 aa16.33■□□□□ 0.2
CHMP1A-203ENST00000547614 Q71RC1 249 aaPredicted RBP16.33■□□□□ 0.2
CHMP1A-203ENST00000547614 ANKK1Q8NFD2 765 aa16.33■□□□□ 0.2
CHMP1A-203ENST00000547614 PRR14Q9BWN1 585 aa16.33■□□□□ 0.2
CHMP1A-203ENST00000547614 C1QTNF6Q9BXI9 259 aa16.33■□□□□ 0.2
CHMP1A-203ENST00000547614 KAT8Q9H7Z6 458 aaKnown RBP16.33■□□□□ 0.2
CHMP1A-203ENST00000547614 FKRPQ9H9S5 495 aa16.33■□□□□ 0.2
CHMP1A-203ENST00000547614 MRGBPQ9NV56 204 aa16.33■□□□□ 0.2
CHMP1A-203ENST00000547614 IGKV1D-42A0A075B6H8 117 aa16.32■□□□□ 0.2
CHMP1A-203ENST00000547614 A0A0B4J2E0 115 aa16.32■□□□□ 0.2
CHMP1A-203ENST00000547614 A0A1B0GX12 115 aa16.32■□□□□ 0.2
CHMP1A-203ENST00000547614 TPST2O60704 377 aa16.32■□□□□ 0.2
CHMP1A-203ENST00000547614 FMO6PO60774 539 aa16.32■□□□□ 0.2
CHMP1A-203ENST00000547614 ZNF432O94892 652 aa16.32■□□□□ 0.2
CHMP1A-203ENST00000547614 C8BP07358 591 aa16.32■□□□□ 0.2
CHMP1A-203ENST00000547614 SLC25A3Q00325 362 aa16.32■□□□□ 0.2
CHMP1A-203ENST00000547614 TNK1Q13470 666 aa16.32■□□□□ 0.2
CHMP1A-203ENST00000547614 NFYCQ13952 458 aa16.32■□□□□ 0.2
CHMP1A-203ENST00000547614 OR1Q1Q15612 314 aa16.32■□□□□ 0.2
CHMP1A-203ENST00000547614 CYP51A1Q16850 503 aa16.32■□□□□ 0.2
CHMP1A-203ENST00000547614 SWT1Q5T5J6 900 aaKnown RBP16.32■□□□□ 0.2
CHMP1A-203ENST00000547614 ZNF544Q6NX49 715 aa16.32■□□□□ 0.2
CHMP1A-203ENST00000547614 H1FNTQ75WM6 255 aaPredicted RBP16.32■□□□□ 0.2
CHMP1A-203ENST00000547614 RANBP3LQ86VV4 465 aaPredicted RBP16.32■□□□□ 0.2
CHMP1A-203ENST00000547614 SLC30A8Q8IWU4 369 aa16.32■□□□□ 0.2
CHMP1A-203ENST00000547614 KDM8Q8N371 416 aa16.32■□□□□ 0.2
CHMP1A-203ENST00000547614 ADPRHL1Q8NDY3 354 aa16.32■□□□□ 0.2
CHMP1A-203ENST00000547614 EPYCQ99645 322 aa16.32■□□□□ 0.2
CHMP1A-203ENST00000547614 BARX1Q9HBU1 254 aaPredicted RBP16.32■□□□□ 0.2
CHMP1A-203ENST00000547614 CBLN4Q9NTU7 201 aa16.32■□□□□ 0.2
CHMP1A-203ENST00000547614 B3GAT1Q9P2W7 334 aa16.32■□□□□ 0.2
CHMP1A-203ENST00000547614 TLN2Q9Y4G6 2542 aa16.32■□□□□ 0.2
CHMP1A-203ENST00000547614 CORINQ9Y5Q5 1042 aa16.32■□□□□ 0.2
CHMP1A-203ENST00000547614 M0QX08 132 aa16.31■□□□□ 0.2
CHMP1A-203ENST00000547614 M0R082 166 aa16.31■□□□□ 0.2
CHMP1A-203ENST00000547614 LGI1O95970 557 aa16.31■□□□□ 0.2
CHMP1A-203ENST00000547614 HOXB1P14653 301 aaPredicted RBP16.31■□□□□ 0.2
CHMP1A-203ENST00000547614 CDH2P19022 906 aaPredicted RBP16.31■□□□□ 0.2
CHMP1A-203ENST00000547614 GRPRP30550 384 aa16.31■□□□□ 0.2
CHMP1A-203ENST00000547614 SH3BGRP55822 239 aaPredicted RBP16.31■□□□□ 0.2
CHMP1A-203ENST00000547614 CLDN17P56750 224 aa16.31■□□□□ 0.2
CHMP1A-203ENST00000547614 MTPNP58546 118 aa16.31■□□□□ 0.2
CHMP1A-203ENST00000547614 SPOCK1Q08629 439 aa16.31■□□□□ 0.2
CHMP1A-203ENST00000547614 NRF1Q16656 503 aa16.31■□□□□ 0.2
CHMP1A-203ENST00000547614 HIKESHIQ53FT3 197 aa16.31■□□□□ 0.2
CHMP1A-203ENST00000547614 FBXL14Q8N1E6 418 aa16.31■□□□□ 0.2
CHMP1A-203ENST00000547614 OR1K1Q8NGR3 316 aa16.31■□□□□ 0.2
CHMP1A-203ENST00000547614 ZNF417Q8TAU3 575 aa16.31■□□□□ 0.2
CHMP1A-203ENST00000547614 MAGEE2Q8TD90 523 aaPredicted RBP16.31■□□□□ 0.2
CHMP1A-203ENST00000547614 SLC41A3Q96GZ6 507 aa16.31■□□□□ 0.2
CHMP1A-203ENST00000547614 ZNF587Q96SQ5 575 aaPredicted RBP16.31■□□□□ 0.2
CHMP1A-203ENST00000547614 MOV10Q9HCE1 1003 aaKnown RBP16.31■□□□□ 0.2
CHMP1A-203ENST00000547614 KLHL14Q9P2G3 628 aa16.31■□□□□ 0.2
CHMP1A-203ENST00000547614 SEC14L4Q9UDX3 406 aa16.31■□□□□ 0.2
CHMP1A-203ENST00000547614 ZANQ9Y493 2812 aa16.3■□□□□ 0.2
CHMP1A-203ENST00000547614 RPL36A-HNRNPH2H7BZ11 118 aa16.3■□□□□ 0.2
CHMP1A-203ENST00000547614 SLC43A1O75387 559 aa16.3■□□□□ 0.2
CHMP1A-203ENST00000547614 UPK3AO75631 287 aa16.3■□□□□ 0.2
CHMP1A-203ENST00000547614 IGHV4-39P01824 125 aa16.3■□□□□ 0.2
CHMP1A-203ENST00000547614 LGALS3BPQ08380 585 aa16.3■□□□□ 0.2
CHMP1A-203ENST00000547614 C1DQ13901 141 aaKnown RBP16.3■□□□□ 0.2
CHMP1A-203ENST00000547614 VEZF1Q14119 521 aa16.3■□□□□ 0.2
CHMP1A-203ENST00000547614 SELPLGQ14242 412 aa16.3■□□□□ 0.2
CHMP1A-203ENST00000547614 DUSP7Q16829 419 aa16.3■□□□□ 0.2
CHMP1A-203ENST00000547614 TBRG1Q3YBR2 411 aa16.3■□□□□ 0.2
CHMP1A-203ENST00000547614 C11orf71Q6IPW1 123 aa16.3■□□□□ 0.2
CHMP1A-203ENST00000547614 HMBOX1Q6NT76 420 aa16.3■□□□□ 0.2
CHMP1A-203ENST00000547614 ANKRD16Q6P6B7 361 aa16.3■□□□□ 0.2
CHMP1A-203ENST00000547614 ZNF613Q6PF04 617 aa16.3■□□□□ 0.2
CHMP1A-203ENST00000547614 DNM1P46Q6ZS02 220 aa16.3■□□□□ 0.2
CHMP1A-203ENST00000547614 PATL1Q86TB9 770 aaKnown RBP16.3■□□□□ 0.2
CHMP1A-203ENST00000547614 MUC15Q8N387 334 aa16.3■□□□□ 0.2
CHMP1A-203ENST00000547614 SCAIQ8N9R8 606 aa16.3■□□□□ 0.2
CHMP1A-203ENST00000547614 SMYD1Q8NB12 490 aa16.3■□□□□ 0.2
CHMP1A-203ENST00000547614 BCL2L2Q92843 193 aaPredicted RBP16.3■□□□□ 0.2
CHMP1A-203ENST00000547614 HS6ST2Q96MM7 605 aa16.3■□□□□ 0.2
CHMP1A-203ENST00000547614 ALKBH3Q96Q83 286 aaPredicted RBP16.3■□□□□ 0.2
CHMP1A-203ENST00000547614 ARHGDIGQ99819 225 aa16.3■□□□□ 0.2
CHMP1A-203ENST00000547614 WFDC6Q9BQY6 131 aa16.3■□□□□ 0.2
CHMP1A-203ENST00000547614 TMEM43Q9BTV4 400 aa16.3■□□□□ 0.2
CHMP1A-203ENST00000547614 TMEM120AQ9BXJ8 343 aa16.3■□□□□ 0.2
CHMP1A-203ENST00000547614 HIVEP2P31629 2446 aa16.3■□□□□ 0.2
CHMP1A-203ENST00000547614 FN1P02751 2386 aaKnown RBP16.29■□□□□ 0.2
CHMP1A-203ENST00000547614 ARPC4-TTLL3A0A0A6YYG9 625 aa16.29■□□□□ 0.2
CHMP1A-203ENST00000547614 AKAP8O43823 692 aaKnown RBP16.29■□□□□ 0.2
CHMP1A-203ENST00000547614 TROVE2P10155 538 aaKnown RBP eCLIP16.29■□□□□ 0.2
CHMP1A-203ENST00000547614 PCGF2P35227 344 aa16.29■□□□□ 0.2
CHMP1A-203ENST00000547614 ACVR1BP36896 505 aa16.29■□□□□ 0.2
CHMP1A-203ENST00000547614 FABP6P51161 128 aa16.29■□□□□ 0.2
CHMP1A-203ENST00000547614 CDH12P55289 794 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms