RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 CLDN17P56750 224 aa11.63□□□□□ -0.55
CPSF6-204ENST00000547486 TUBA1BP68363 451 aa11.63□□□□□ -0.55
CPSF6-204ENST00000547486 TUBA4AP68366 448 aa11.63□□□□□ -0.55
CPSF6-204ENST00000547486 SWI5Q1ZZU3 235 aa11.63□□□□□ -0.55
CPSF6-204ENST00000547486 ELOA3BQ3SY89 546 aa11.63□□□□□ -0.55
CPSF6-204ENST00000547486 AGKQ53H12 422 aa11.63□□□□□ -0.55
CPSF6-204ENST00000547486 C1QTNF12Q5T7M4 302 aa11.63□□□□□ -0.55
CPSF6-204ENST00000547486 REEP3Q6NUK4 255 aa11.63□□□□□ -0.55
CPSF6-204ENST00000547486 DHRS4L2Q6PKH6 230 aa11.63□□□□□ -0.55
CPSF6-204ENST00000547486 TUBA1AQ71U36 451 aa11.63□□□□□ -0.55
CPSF6-204ENST00000547486 ABHD12BQ7Z5M8 362 aaPredicted RBP11.63□□□□□ -0.55
CPSF6-204ENST00000547486 ELOA3Q8NG57 546 aa11.63□□□□□ -0.55
CPSF6-204ENST00000547486 ZNF837Q96EG3 531 aaPredicted RBP11.63□□□□□ -0.55
CPSF6-204ENST00000547486 ATP6V1G3Q96LB4 118 aa11.63□□□□□ -0.55
CPSF6-204ENST00000547486 OXGR1Q96P68 337 aa11.63□□□□□ -0.55
CPSF6-204ENST00000547486 LINC00470Q9BZP3 86 aa11.63□□□□□ -0.55
CPSF6-204ENST00000547486 SEC61A2Q9H9S3 476 aa11.63□□□□□ -0.55
CPSF6-204ENST00000547486 MS4A18H0YCH9 400 aa11.62□□□□□ -0.55
CPSF6-204ENST00000547486 M0R082 166 aa11.62□□□□□ -0.55
CPSF6-204ENST00000547486 TLX2O43763 284 aaPredicted RBP11.62□□□□□ -0.55
CPSF6-204ENST00000547486 ZNF43P17038 809 aa11.62□□□□□ -0.55
CPSF6-204ENST00000547486 GPX2P18283 190 aa11.62□□□□□ -0.55
CPSF6-204ENST00000547486 GRPRP30550 384 aa11.62□□□□□ -0.55
CPSF6-204ENST00000547486 DSCR9P59020 149 aa11.62□□□□□ -0.55
CPSF6-204ENST00000547486 ROR2Q01974 943 aaKnown RBP11.62□□□□□ -0.55
CPSF6-204ENST00000547486 MS4A18Q3C1V0 323 aa11.62□□□□□ -0.55
CPSF6-204ENST00000547486 ANKRD16Q6P6B7 361 aa11.62□□□□□ -0.55
CPSF6-204ENST00000547486 KLHL24Q6TFL4 600 aa11.62□□□□□ -0.55
CPSF6-204ENST00000547486 CLEC2AQ6UVW9 174 aa11.62□□□□□ -0.55
CPSF6-204ENST00000547486 DLEU7Q6UYE1 221 aa11.62□□□□□ -0.55
CPSF6-204ENST00000547486 ZNF417Q8TAU3 575 aa11.62□□□□□ -0.55
CPSF6-204ENST00000547486 FBXO17Q96EF6 278 aa11.62□□□□□ -0.55
CPSF6-204ENST00000547486 SLC38A2Q96QD8 506 aa11.62□□□□□ -0.55
CPSF6-204ENST00000547486 ZNF587Q96SQ5 575 aaPredicted RBP11.62□□□□□ -0.55
CPSF6-204ENST00000547486 C12orf10Q9HB07 376 aa11.62□□□□□ -0.55
CPSF6-204ENST00000547486 OBP2BQ9NPH6 170 aa11.62□□□□□ -0.55
CPSF6-204ENST00000547486 CRNNQ9UBG3 495 aaPredicted RBP11.62□□□□□ -0.55
CPSF6-204ENST00000547486 RPS6KB2Q9UBS0 482 aa11.62□□□□□ -0.55
CPSF6-204ENST00000547486 CR1P17927 2039 aa11.62□□□□□ -0.55
CPSF6-204ENST00000547486 ARPC4-TTLL3A0A0A6YYG9 625 aa11.61□□□□□ -0.55
CPSF6-204ENST00000547486 ZNF503-AS2A6NEH8 195 aa11.61□□□□□ -0.55
CPSF6-204ENST00000547486 OR6C65A6NJZ3 312 aa11.61□□□□□ -0.55
CPSF6-204ENST00000547486 RPL36A-HNRNPH2H7BZ11 118 aa11.61□□□□□ -0.55
CPSF6-204ENST00000547486 HPRP00739 348 aa11.61□□□□□ -0.55
CPSF6-204ENST00000547486 F12P00748 615 aaPredicted RBP11.61□□□□□ -0.55
CPSF6-204ENST00000547486 CECR9P0C854 216 aa11.61□□□□□ -0.55
CPSF6-204ENST00000547486 AQP1P29972 269 aa11.61□□□□□ -0.55
CPSF6-204ENST00000547486 CALCRP30988 508 aa11.61□□□□□ -0.55
CPSF6-204ENST00000547486 EFNA4P52798 201 aa11.61□□□□□ -0.55
CPSF6-204ENST00000547486 UBE2NP61088 152 aaKnown RBP11.61□□□□□ -0.55
CPSF6-204ENST00000547486 ARF1P84077 181 aaKnown RBP11.61□□□□□ -0.55
CPSF6-204ENST00000547486 CHRNB3Q05901 458 aa11.61□□□□□ -0.55
CPSF6-204ENST00000547486 SCARB2Q14108 478 aa11.61□□□□□ -0.55
CPSF6-204ENST00000547486 RUNDC3AQ59EK9 446 aa11.61□□□□□ -0.55
CPSF6-204ENST00000547486 ALG10BQ5I7T1 473 aa11.61□□□□□ -0.55
CPSF6-204ENST00000547486 PHYHD1Q5SRE7 291 aa11.61□□□□□ -0.55
CPSF6-204ENST00000547486 FAM69AQ5T7M9 428 aa11.61□□□□□ -0.55
CPSF6-204ENST00000547486 HMBOX1Q6NT76 420 aa11.61□□□□□ -0.55
CPSF6-204ENST00000547486 ULK3Q6PHR2 472 aa11.61□□□□□ -0.55
CPSF6-204ENST00000547486 NHLRC1Q6VVB1 395 aa11.61□□□□□ -0.55
CPSF6-204ENST00000547486 H1FNTQ75WM6 255 aaPredicted RBP11.61□□□□□ -0.55
CPSF6-204ENST00000547486 HIPK1Q86Z02 1210 aa11.61□□□□□ -0.55
CPSF6-204ENST00000547486 WDFY1Q8IWB7 410 aa11.61□□□□□ -0.55
CPSF6-204ENST00000547486 MAGEE2Q8TD90 523 aaPredicted RBP11.61□□□□□ -0.55
CPSF6-204ENST00000547486 C10orf105Q8TEF2 133 aa11.61□□□□□ -0.55
CPSF6-204ENST00000547486 SLC38A4Q969I6 547 aa11.61□□□□□ -0.55
CPSF6-204ENST00000547486 THOC1Q96FV9 657 aaKnown RBP11.61□□□□□ -0.55
CPSF6-204ENST00000547486 OR2M2Q96R28 347 aa11.61□□□□□ -0.55
CPSF6-204ENST00000547486 TNFRSF13CQ96RJ3 184 aa11.61□□□□□ -0.55
CPSF6-204ENST00000547486 CPPED1Q9BRF8 314 aaPredicted RBP11.61□□□□□ -0.55
CPSF6-204ENST00000547486 TMEM38AQ9H6F2 299 aa11.61□□□□□ -0.55
CPSF6-204ENST00000547486 GPR35Q9HC97 309 aa11.61□□□□□ -0.55
CPSF6-204ENST00000547486 KLHL14Q9P2G3 628 aa11.61□□□□□ -0.55
CPSF6-204ENST00000547486 RCE1Q9Y256 329 aa11.61□□□□□ -0.55
CPSF6-204ENST00000547486 ABCA1O95477 2261 aa11.61□□□□□ -0.55
CPSF6-204ENST00000547486 PLCE1Q9P212 2302 aa11.6□□□□□ -0.55
CPSF6-204ENST00000547486 SONP18583 2426 aaKnown RBP11.6□□□□□ -0.55
CPSF6-204ENST00000547486 TRAV36DV7A0A075B6V5 113 aa11.6□□□□□ -0.55
CPSF6-204ENST00000547486 A0A087WUJ7 227 aa11.6□□□□□ -0.55
CPSF6-204ENST00000547486 LOC102725191A0A1B0GVB3 256 aa11.6□□□□□ -0.55
CPSF6-204ENST00000547486 OR2T1O43869 369 aa11.6□□□□□ -0.55
CPSF6-204ENST00000547486 MFN2O95140 757 aa11.6□□□□□ -0.55
CPSF6-204ENST00000547486 IGLV1-44P01699 117 aa11.6□□□□□ -0.55
CPSF6-204ENST00000547486 CELA3BP08861 270 aa11.6□□□□□ -0.55
CPSF6-204ENST00000547486 HLA-DOBP13765 273 aa11.6□□□□□ -0.55
CPSF6-204ENST00000547486 PPIBP23284 216 aaKnown RBP11.6□□□□□ -0.55
CPSF6-204ENST00000547486 SLC6A2P23975 617 aa11.6□□□□□ -0.55
CPSF6-204ENST00000547486 SERPINF1P36955 418 aa11.6□□□□□ -0.55
CPSF6-204ENST00000547486 ATP4BP51164 291 aa11.6□□□□□ -0.55
CPSF6-204ENST00000547486 NAAAQ02083 359 aa11.6□□□□□ -0.55
CPSF6-204ENST00000547486 HGFACQ04756 655 aa11.6□□□□□ -0.55
CPSF6-204ENST00000547486 LOXL1Q08397 574 aaPredicted RBP11.6□□□□□ -0.55
CPSF6-204ENST00000547486 C1DQ13901 141 aaKnown RBP11.6□□□□□ -0.55
CPSF6-204ENST00000547486 OR1Q1Q15612 314 aa11.6□□□□□ -0.55
CPSF6-204ENST00000547486 ADIPOQQ15848 244 aa11.6□□□□□ -0.55
CPSF6-204ENST00000547486 TMEM249Q2WGJ8 235 aa11.6□□□□□ -0.55
CPSF6-204ENST00000547486 NET1Q7Z628 596 aaPredicted RBP11.6□□□□□ -0.55
CPSF6-204ENST00000547486 MYPOPQ86VE0 399 aaPredicted RBP11.6□□□□□ -0.55
CPSF6-204ENST00000547486 KRT73Q86Y46 540 aa11.6□□□□□ -0.55
CPSF6-204ENST00000547486 PTOV1Q86YD1 416 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms