RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 EPHA6Q9UF33 1036 aa11.58□□□□□ -0.56
SCAF11-209ENST00000547018 RGS9O75916 674 aaPredicted RBP11.58□□□□□ -0.56
SCAF11-209ENST00000547018 PTHLHP12272 177 aa11.58□□□□□ -0.56
SCAF11-209ENST00000547018 GP1BBP13224 206 aa11.58□□□□□ -0.56
SCAF11-209ENST00000547018 PRKCAP17252 672 aa11.58□□□□□ -0.56
SCAF11-209ENST00000547018 EGR4Q05215 589 aa11.58□□□□□ -0.56
SCAF11-209ENST00000547018 GALEQ14376 348 aa11.58□□□□□ -0.56
SCAF11-209ENST00000547018 COL19A1Q14993 1142 aa11.58□□□□□ -0.56
SCAF11-209ENST00000547018 PAPD4Q6PIY7 484 aaKnown RBP11.58□□□□□ -0.56
SCAF11-209ENST00000547018 VASH1Q7L8A9 365 aaPredicted RBP11.58□□□□□ -0.56
SCAF11-209ENST00000547018 OR4D9Q8NGE8 314 aa11.58□□□□□ -0.56
SCAF11-209ENST00000547018 ZNF501Q96CX3 271 aaPredicted RBP11.58□□□□□ -0.56
SCAF11-209ENST00000547018 MSANTD3Q96H12 275 aa11.58□□□□□ -0.56
SCAF11-209ENST00000547018 EMC6Q9BV81 110 aa11.58□□□□□ -0.56
SCAF11-209ENST00000547018 RNF32Q9H0A6 362 aa11.58□□□□□ -0.56
SCAF11-209ENST00000547018 C11orf54Q9H0W9 315 aaPredicted RBP11.58□□□□□ -0.56
SCAF11-209ENST00000547018 ERVMER34-1Q9H9K5 563 aa11.58□□□□□ -0.56
SCAF11-209ENST00000547018 FKRPQ9H9S5 495 aa11.58□□□□□ -0.56
SCAF11-209ENST00000547018 MED17Q9NVC6 651 aa11.58□□□□□ -0.56
SCAF11-209ENST00000547018 NKIRAS2Q9NYR9 191 aa11.58□□□□□ -0.56
SCAF11-209ENST00000547018 SUSD2Q9UGT4 822 aa11.58□□□□□ -0.56
SCAF11-209ENST00000547018 TBC1D24Q9ULP9 559 aa11.58□□□□□ -0.56
SCAF11-209ENST00000547018 BOLA1Q9Y3E2 137 aa11.58□□□□□ -0.56
SCAF11-209ENST00000547018 ZNF337Q9Y3M9 751 aa11.58□□□□□ -0.56
SCAF11-209ENST00000547018 CEP192Q8TEP8 1941 aa11.58□□□□□ -0.56
SCAF11-209ENST00000547018 CCDC182A6NF36 153 aa11.57□□□□□ -0.56
SCAF11-209ENST00000547018 OR7A10O76100 309 aa11.57□□□□□ -0.56
SCAF11-209ENST00000547018 CLPSP04118 112 aa11.57□□□□□ -0.56
SCAF11-209ENST00000547018 ELK1P19419 428 aa11.57□□□□□ -0.56
SCAF11-209ENST00000547018 PSMD4P55036 377 aaKnown RBP11.57□□□□□ -0.56
SCAF11-209ENST00000547018 SCN1BQ07699 218 aa11.57□□□□□ -0.56
SCAF11-209ENST00000547018 CBX3Q13185 183 aa11.57□□□□□ -0.56
SCAF11-209ENST00000547018 QPRTQ15274 297 aa11.57□□□□□ -0.56
SCAF11-209ENST00000547018 ZNF775Q96BV0 537 aaPredicted RBP11.57□□□□□ -0.56
SCAF11-209ENST00000547018 C5orf34Q96MH7 638 aa11.57□□□□□ -0.56
SCAF11-209ENST00000547018 ENAMQ9NRM1 1142 aa11.57□□□□□ -0.56
SCAF11-209ENST00000547018 RARRES3Q9UL19 164 aa11.57□□□□□ -0.56
SCAF11-209ENST00000547018 EFCAB7A8K855 629 aa11.57□□□□□ -0.56
SCAF11-209ENST00000547018 XKRYO14609 159 aa11.57□□□□□ -0.56
SCAF11-209ENST00000547018 EEF1E1O43324 174 aaKnown RBP11.57□□□□□ -0.56
SCAF11-209ENST00000547018 CSF3P09919 207 aa11.57□□□□□ -0.56
SCAF11-209ENST00000547018 CCL4P13236 92 aa11.57□□□□□ -0.56
SCAF11-209ENST00000547018 SFTPDP35247 375 aa11.57□□□□□ -0.56
SCAF11-209ENST00000547018 EMP2P54851 167 aa11.57□□□□□ -0.56
SCAF11-209ENST00000547018 LGALS3BPQ08380 585 aa11.57□□□□□ -0.56
SCAF11-209ENST00000547018 SKP2Q13309 424 aa11.57□□□□□ -0.56
SCAF11-209ENST00000547018 OGFOD3Q6PK18 319 aa11.57□□□□□ -0.56
SCAF11-209ENST00000547018 METAP1DQ6UB28 335 aaPredicted RBP11.57□□□□□ -0.56
SCAF11-209ENST00000547018 PAMR1Q6UXH9 720 aa11.57□□□□□ -0.56
SCAF11-209ENST00000547018 GDPGP1Q6ZNW5 385 aa11.57□□□□□ -0.56
SCAF11-209ENST00000547018 PRSS45Q7RTY3 260 aa11.57□□□□□ -0.56
SCAF11-209ENST00000547018 MRGPREQ86SM8 312 aa11.57□□□□□ -0.56
SCAF11-209ENST00000547018 GPAT4Q86UL3 456 aa11.57□□□□□ -0.56
SCAF11-209ENST00000547018 AKAP14Q86UN6 197 aa11.57□□□□□ -0.56
SCAF11-209ENST00000547018 CAPSLQ8WWF8 208 aa11.57□□□□□ -0.56
SCAF11-209ENST00000547018 AP3S1Q92572 193 aa11.57□□□□□ -0.56
SCAF11-209ENST00000547018 PELI1Q96FA3 418 aa11.57□□□□□ -0.56
SCAF11-209ENST00000547018 ZNF649Q9BS31 505 aa11.57□□□□□ -0.56
SCAF11-209ENST00000547018 TMEM131Q92545 1883 aa11.57□□□□□ -0.56
SCAF11-209ENST00000547018 TRDV1A0A1B0GX56 115 aa11.57□□□□□ -0.56
SCAF11-209ENST00000547018 NPIPB9F8W1W9 429 aa11.57□□□□□ -0.56
SCAF11-209ENST00000547018 LAMTOR5O43504 91 aa11.57□□□□□ -0.56
SCAF11-209ENST00000547018 SPARCP09486 303 aa11.57□□□□□ -0.56
SCAF11-209ENST00000547018 SRP9P49458 86 aaKnown RBP11.57□□□□□ -0.56
SCAF11-209ENST00000547018 GBX2P52951 348 aaPredicted RBP11.57□□□□□ -0.56
SCAF11-209ENST00000547018 CD83Q01151 205 aa11.57□□□□□ -0.56
SCAF11-209ENST00000547018 SHBQ15464 509 aa11.57□□□□□ -0.56
SCAF11-209ENST00000547018 TRIM61Q5EBN2 209 aa11.57□□□□□ -0.56
SCAF11-209ENST00000547018 SLC25A30Q5SVS4 291 aa11.57□□□□□ -0.56
SCAF11-209ENST00000547018 ARSKQ6UWY0 536 aa11.57□□□□□ -0.56
SCAF11-209ENST00000547018 LSMEM1Q8N8F7 131 aa11.57□□□□□ -0.56
SCAF11-209ENST00000547018 NPEPL1Q8NDH3 523 aa11.57□□□□□ -0.56
SCAF11-209ENST00000547018 ARL5BQ96KC2 179 aa11.57□□□□□ -0.56
SCAF11-209ENST00000547018 CCDC74BQ96LY2 380 aa11.57□□□□□ -0.56
SCAF11-209ENST00000547018 MMP25Q9NPA2 562 aa11.57□□□□□ -0.56
SCAF11-209ENST00000547018 TBCCD1Q9NVR7 557 aa11.57□□□□□ -0.56
SCAF11-209ENST00000547018 CHRNA9Q9UGM1 479 aa11.57□□□□□ -0.56
SCAF11-209ENST00000547018 TEKT2Q9UIF3 430 aa11.57□□□□□ -0.56
SCAF11-209ENST00000547018 KLHDC2Q9Y2U9 406 aa11.57□□□□□ -0.56
SCAF11-209ENST00000547018 FAM240BA0A1B0GVZ2 78 aa11.56□□□□□ -0.56
SCAF11-209ENST00000547018 FMO6PO60774 539 aa11.56□□□□□ -0.56
SCAF11-209ENST00000547018 MPZL1O95297 269 aa11.56□□□□□ -0.56
SCAF11-209ENST00000547018 IL33O95760 270 aa11.56□□□□□ -0.56
SCAF11-209ENST00000547018 IGHA1P01876 353 aa11.56□□□□□ -0.56
SCAF11-209ENST00000547018 KRR1Q13601 381 aaKnown RBP11.56□□□□□ -0.56
SCAF11-209ENST00000547018 FHL1Q13642 323 aa11.56□□□□□ -0.56
SCAF11-209ENST00000547018 ZNF74Q16587 644 aa11.56□□□□□ -0.56
SCAF11-209ENST00000547018 COL28A1Q2UY09 1125 aa11.56□□□□□ -0.56
SCAF11-209ENST00000547018 LRRN1Q6UXK5 716 aa11.56□□□□□ -0.56
SCAF11-209ENST00000547018 D2HGDHQ8N465 521 aa11.56□□□□□ -0.56
SCAF11-209ENST00000547018 ZSCAN1Q8NBB4 408 aa11.56□□□□□ -0.56
SCAF11-209ENST00000547018 OR5H6Q8NGV6 325 aa11.56□□□□□ -0.56
SCAF11-209ENST00000547018 OR52N1Q8NH53 320 aa11.56□□□□□ -0.56
SCAF11-209ENST00000547018 SLC39A7Q92504 469 aa11.56□□□□□ -0.56
SCAF11-209ENST00000547018 MR1Q95460 341 aa11.56□□□□□ -0.56
SCAF11-209ENST00000547018 TIMP4Q99727 224 aa11.56□□□□□ -0.56
SCAF11-209ENST00000547018 COQ7Q99807 217 aa11.56□□□□□ -0.56
SCAF11-209ENST00000547018 KCNN2Q9H2S1 579 aa11.56□□□□□ -0.56
SCAF11-209ENST00000547018 MRTO4Q9UKD2 239 aaKnown RBP11.56□□□□□ -0.56
SCAF11-209ENST00000547018 EXOGQ9Y2C4 368 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms