RNA–Protein interactions for RNA: ENST00000546810.1

RAB5B-203, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-203ENST00000546810 RNF128Q8TEB7 428 aa11.92□□□□□ -0.5
RAB5B-203ENST00000546810 TMEM158Q8WZ71 300 aa11.92□□□□□ -0.5
RAB5B-203ENST00000546810 ROBO4Q8WZ75 1007 aa11.92□□□□□ -0.5
RAB5B-203ENST00000546810 INTS12Q96CB8 462 aaKnown RBP11.92□□□□□ -0.5
RAB5B-203ENST00000546810 GMPPAQ96IJ6 420 aaPredicted RBP11.92□□□□□ -0.5
RAB5B-203ENST00000546810 SFXN3Q9BWM7 321 aa11.92□□□□□ -0.5
RAB5B-203ENST00000546810 SLC19A3Q9BZV2 496 aa11.92□□□□□ -0.5
RAB5B-203ENST00000546810 KLHL4Q9C0H6 718 aa11.92□□□□□ -0.5
RAB5B-203ENST00000546810 GP6Q9HCN6 339 aa11.92□□□□□ -0.5
RAB5B-203ENST00000546810 C6orf203Q9P0P8 240 aaPredicted RBP11.92□□□□□ -0.5
RAB5B-203ENST00000546810 KLHL9Q9P2J3 617 aa11.92□□□□□ -0.5
RAB5B-203ENST00000546810 EMC9Q9Y3B6 208 aa11.92□□□□□ -0.5
RAB5B-203ENST00000546810 LIPT2A6NK58 231 aa11.91□□□□□ -0.5
RAB5B-203ENST00000546810 AQP12BA6NM10 295 aa11.91□□□□□ -0.5
RAB5B-203ENST00000546810 KDM4EB2RXH2 506 aaPredicted RBP11.91□□□□□ -0.5
RAB5B-203ENST00000546810 ACOT8O14734 319 aa11.91□□□□□ -0.5
RAB5B-203ENST00000546810 AQP8O94778 261 aa11.91□□□□□ -0.5
RAB5B-203ENST00000546810 IMPDH2P12268 514 aa11.91□□□□□ -0.5
RAB5B-203ENST00000546810 ATP6V1B2P21281 511 aa11.91□□□□□ -0.5
RAB5B-203ENST00000546810 RPS5P46782 204 aaKnown RBP11.91□□□□□ -0.5
RAB5B-203ENST00000546810 YAP1P46937 504 aaKnown RBP11.91□□□□□ -0.5
RAB5B-203ENST00000546810 AGFG1P52594 562 aaKnown RBP11.91□□□□□ -0.5
RAB5B-203ENST00000546810 SMIM11AP58511 58 aa11.91□□□□□ -0.5
RAB5B-203ENST00000546810 SORDQ00796 357 aa11.91□□□□□ -0.5
RAB5B-203ENST00000546810 CHRNB3Q05901 458 aa11.91□□□□□ -0.5
RAB5B-203ENST00000546810 RASGEF1BQ0VAM2 473 aa11.91□□□□□ -0.5
RAB5B-203ENST00000546810 FLOT2Q14254 428 aa11.91□□□□□ -0.5
RAB5B-203ENST00000546810 TRAM2Q15035 370 aa11.91□□□□□ -0.5
RAB5B-203ENST00000546810 FAM98BQ52LJ0 330 aaKnown RBP11.91□□□□□ -0.5
RAB5B-203ENST00000546810 TMEM201Q5SNT2 666 aa11.91□□□□□ -0.5
RAB5B-203ENST00000546810 PAQR6Q6TCH4 344 aa11.91□□□□□ -0.5
RAB5B-203ENST00000546810 LINC00114Q6XXX2 140 aa11.91□□□□□ -0.5
RAB5B-203ENST00000546810 AQP12AQ8IXF9 295 aa11.91□□□□□ -0.5
RAB5B-203ENST00000546810 OFCC1Q8IZS5 231 aa11.91□□□□□ -0.5
RAB5B-203ENST00000546810 GCNT2Q8N0V5 402 aa11.91□□□□□ -0.5
RAB5B-203ENST00000546810 C10orf53Q8N6V4 93 aa11.91□□□□□ -0.5
RAB5B-203ENST00000546810 FAM86B1Q8N7N1 296 aa11.91□□□□□ -0.5
RAB5B-203ENST00000546810 PIGTQ969N2 578 aa11.91□□□□□ -0.5
RAB5B-203ENST00000546810 SLC25A36Q96CQ1 311 aa11.91□□□□□ -0.5
RAB5B-203ENST00000546810 DNAJA3Q96EY1 480 aa11.91□□□□□ -0.5
RAB5B-203ENST00000546810 ZNF300Q96RE9 604 aaPredicted RBP11.91□□□□□ -0.5
RAB5B-203ENST00000546810 ZNF347Q96SE7 839 aa11.91□□□□□ -0.5
RAB5B-203ENST00000546810 MAGIXQ9H6Y5 334 aa11.91□□□□□ -0.5
RAB5B-203ENST00000546810 EMC3Q9P0I2 261 aa11.91□□□□□ -0.5
RAB5B-203ENST00000546810 A4GNTQ9UNA3 340 aa11.91□□□□□ -0.5
RAB5B-203ENST00000546810 POMPQ9Y244 141 aa11.91□□□□□ -0.5
RAB5B-203ENST00000546810 IGKV1D-42A0A075B6H8 117 aa11.9□□□□□ -0.5
RAB5B-203ENST00000546810 IGHV3-15A0A0B4J1V0 119 aa11.9□□□□□ -0.5
RAB5B-203ENST00000546810 HTR3EA5X5Y0 456 aa11.9□□□□□ -0.5
RAB5B-203ENST00000546810 hCG_2039718K7EN88 272 aa11.9□□□□□ -0.5
RAB5B-203ENST00000546810 SMAD9O15198 467 aaKnown RBP11.9□□□□□ -0.5
RAB5B-203ENST00000546810 CYTIPO60759 359 aa11.9□□□□□ -0.5
RAB5B-203ENST00000546810 SS18L1O75177 396 aaPredicted RBP11.9□□□□□ -0.5
RAB5B-203ENST00000546810 CIB2O75838 187 aa11.9□□□□□ -0.5
RAB5B-203ENST00000546810 MT-ATP6P00846 226 aa11.9□□□□□ -0.5
RAB5B-203ENST00000546810 THY1P04216 161 aa11.9□□□□□ -0.5
RAB5B-203ENST00000546810 UMPSP11172 480 aa11.9□□□□□ -0.5
RAB5B-203ENST00000546810 EGR4Q05215 589 aa11.9□□□□□ -0.5
RAB5B-203ENST00000546810 GABPB1Q06547 395 aaPredicted RBP11.9□□□□□ -0.5
RAB5B-203ENST00000546810 PDK3Q15120 406 aa11.9□□□□□ -0.5
RAB5B-203ENST00000546810 OTUD3Q5T2D3 398 aaPredicted RBP11.9□□□□□ -0.5
RAB5B-203ENST00000546810 PODNL1Q6PEZ8 512 aa11.9□□□□□ -0.5
RAB5B-203ENST00000546810 PLXDC2Q6UX71 529 aa11.9□□□□□ -0.5
RAB5B-203ENST00000546810 FAM214BQ7L5A3 538 aa11.9□□□□□ -0.5
RAB5B-203ENST00000546810 RRM2BQ7LG56 351 aa11.9□□□□□ -0.5
RAB5B-203ENST00000546810 SPATA24Q86W54 205 aa11.9□□□□□ -0.5
RAB5B-203ENST00000546810 ZDHHC21Q8IVQ6 265 aa11.9□□□□□ -0.5
RAB5B-203ENST00000546810 CNEP1R1Q8N9A8 125 aa11.9□□□□□ -0.5
RAB5B-203ENST00000546810 TMEM239Q8WW34 195 aa11.9□□□□□ -0.5
RAB5B-203ENST00000546810 TAAR8Q969N4 342 aa11.9□□□□□ -0.5
RAB5B-203ENST00000546810 KTI12Q96EK9 354 aaPredicted RBP11.9□□□□□ -0.5
RAB5B-203ENST00000546810 C7orf34Q96L11 122 aa11.9□□□□□ -0.5
RAB5B-203ENST00000546810 SEPHS2Q99611 448 aa11.9□□□□□ -0.5
RAB5B-203ENST00000546810 PRSS27Q9BQR3 290 aa11.9□□□□□ -0.5
RAB5B-203ENST00000546810 ASPNQ9BXN1 380 aa11.9□□□□□ -0.5
RAB5B-203ENST00000546810 PIGMQ9H3S5 423 aa11.9□□□□□ -0.5
RAB5B-203ENST00000546810 ANKRD19PQ9H560 264 aa11.9□□□□□ -0.5
RAB5B-203ENST00000546810 IL1RAPQ9NPH3 570 aa11.9□□□□□ -0.5
RAB5B-203ENST00000546810 NDUFAF4Q9P032 175 aa11.9□□□□□ -0.5
RAB5B-203ENST00000546810 MED31Q9Y3C7 131 aa11.9□□□□□ -0.5
RAB5B-203ENST00000546810 CORINQ9Y5Q5 1042 aa11.9□□□□□ -0.5
RAB5B-203ENST00000546810 MPDZO75970 2070 aa11.9□□□□□ -0.51
RAB5B-203ENST00000546810 A0A1W2PNV4 684 aa11.89□□□□□ -0.51
RAB5B-203ENST00000546810 TCRBV5S2A0A599 114 aa11.89□□□□□ -0.51
RAB5B-203ENST00000546810 J3KTA2 159 aa11.89□□□□□ -0.51
RAB5B-203ENST00000546810 GPR171O14626 319 aa11.89□□□□□ -0.51
RAB5B-203ENST00000546810 VAMP5O95183 116 aa11.89□□□□□ -0.51
RAB5B-203ENST00000546810 LYPD3O95274 346 aa11.89□□□□□ -0.51
RAB5B-203ENST00000546810 IGF2P01344 180 aa11.89□□□□□ -0.51
RAB5B-203ENST00000546810 IFNA2P01563 188 aa11.89□□□□□ -0.51
RAB5B-203ENST00000546810 SEMG1P04279 462 aa11.89□□□□□ -0.51
RAB5B-203ENST00000546810 H1F0P07305 194 aaKnown RBP11.89□□□□□ -0.51
RAB5B-203ENST00000546810 SIRPAP78324 504 aa11.89□□□□□ -0.51
RAB5B-203ENST00000546810 H3F3AP84243 136 aa11.89□□□□□ -0.51
RAB5B-203ENST00000546810 VLDLRP98155 873 aa11.89□□□□□ -0.51
RAB5B-203ENST00000546810 TMEM225Q6GV28 225 aa11.89□□□□□ -0.51
RAB5B-203ENST00000546810 TSPYL5Q86VY4 417 aaPredicted RBP11.89□□□□□ -0.51
RAB5B-203ENST00000546810 NKAIN4Q8IVV8 208 aa11.89□□□□□ -0.51
RAB5B-203ENST00000546810 RNF113BQ8IZP6 322 aaKnown RBP11.89□□□□□ -0.51
RAB5B-203ENST00000546810 PIK3C3Q8NEB9 887 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms