RNA–Protein interactions for RNA: ENST00000546411.6

CUX1-211, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-211ENST00000546411 OR2S2Q9NQN1 319 aa14.42□□□□□ -0.1
CUX1-211ENST00000546411 SDK2Q58EX2 2172 aa14.42□□□□□ -0.1
CUX1-211ENST00000546411 CEP350Q5VT06 3117 aa14.42□□□□□ -0.1
CUX1-211ENST00000546411 EEF1E1-BLOC1S5C9J1V9 151 aa14.42□□□□□ -0.1
CUX1-211ENST00000546411 FABP7O15540 132 aa14.42□□□□□ -0.1
CUX1-211ENST00000546411 SYT7O43581 403 aa14.42□□□□□ -0.1
CUX1-211ENST00000546411 GCM2O75603 506 aaPredicted RBP14.42□□□□□ -0.1
CUX1-211ENST00000546411 CSF3P09919 207 aa14.42□□□□□ -0.1
CUX1-211ENST00000546411 GABRG2P18507 467 aa14.42□□□□□ -0.1
CUX1-211ENST00000546411 PRSS53Q2L4Q9 553 aa14.42□□□□□ -0.1
CUX1-211ENST00000546411 LIPNQ5VXI9 398 aa14.42□□□□□ -0.1
CUX1-211ENST00000546411 CA13Q8N1Q1 262 aa14.42□□□□□ -0.1
CUX1-211ENST00000546411 OR5J2Q8NH18 312 aa14.42□□□□□ -0.1
CUX1-211ENST00000546411 THAP6Q8TBB0 222 aa14.42□□□□□ -0.1
CUX1-211ENST00000546411 PGAM5Q96HS1 289 aa14.42□□□□□ -0.1
CUX1-211ENST00000546411 WFDC6Q9BQY6 131 aa14.42□□□□□ -0.1
CUX1-211ENST00000546411 ARHGAP9Q9BRR9 750 aa14.42□□□□□ -0.1
CUX1-211ENST00000546411 SLC6A15Q9H2J7 730 aa14.42□□□□□ -0.1
CUX1-211ENST00000546411 INPP5EQ9NRR6 644 aa14.42□□□□□ -0.1
CUX1-211ENST00000546411 POLHQ9Y253 713 aa14.42□□□□□ -0.1
CUX1-211ENST00000546411 CXorf51AA0A1B0GTR3 108 aa14.41□□□□□ -0.1
CUX1-211ENST00000546411 TP53I11O14683 189 aa14.41□□□□□ -0.1
CUX1-211ENST00000546411 SNTA1Q13424 505 aa14.41□□□□□ -0.1
CUX1-211ENST00000546411 MEP1BQ16820 701 aa14.41□□□□□ -0.1
CUX1-211ENST00000546411 C12orf73Q69YU5 71 aa14.41□□□□□ -0.1
CUX1-211ENST00000546411 TMEM92Q6UXU6 159 aa14.41□□□□□ -0.1
CUX1-211ENST00000546411 CD163Q86VB7 1156 aa14.41□□□□□ -0.1
CUX1-211ENST00000546411 ZNF615Q8N8J6 731 aa14.41□□□□□ -0.1
CUX1-211ENST00000546411 LCORQ96JN0 433 aaPredicted RBP14.41□□□□□ -0.1
CUX1-211ENST00000546411 VSX1Q9NZR4 365 aaPredicted RBP14.41□□□□□ -0.1
CUX1-211ENST00000546411 TMEM269A0A1B0GVZ9 245 aa14.41□□□□□ -0.1
CUX1-211ENST00000546411 OR2T1O43869 369 aa14.41□□□□□ -0.1
CUX1-211ENST00000546411 LDOC1O95751 146 aaPredicted RBP14.41□□□□□ -0.1
CUX1-211ENST00000546411 THBS1P07996 1170 aa14.41□□□□□ -0.1
CUX1-211ENST00000546411 MTNR1BP49286 362 aa14.41□□□□□ -0.1
CUX1-211ENST00000546411 SELENBP1Q13228 472 aa14.41□□□□□ -0.1
CUX1-211ENST00000546411 OR5L2Q8NGL0 311 aa14.41□□□□□ -0.1
CUX1-211ENST00000546411 ZNF417Q8TAU3 575 aa14.41□□□□□ -0.1
CUX1-211ENST00000546411 FAM174AQ8TBP5 190 aa14.41□□□□□ -0.1
CUX1-211ENST00000546411 GIMAP1Q8WWP7 306 aa14.41□□□□□ -0.1
CUX1-211ENST00000546411 SLC7A6Q92536 515 aa14.41□□□□□ -0.1
CUX1-211ENST00000546411 BMFQ96LC9 184 aa14.41□□□□□ -0.1
CUX1-211ENST00000546411 NCDNQ9UBB6 729 aa14.41□□□□□ -0.1
CUX1-211ENST00000546411 TEX13DA0A0J9YY54 714 aaPredicted RBP14.41□□□□□ -0.1
CUX1-211ENST00000546411 SERTM1A2A2V5 107 aa14.41□□□□□ -0.1
CUX1-211ENST00000546411 TRIM64CA6NLI5 447 aa14.41□□□□□ -0.1
CUX1-211ENST00000546411 OTX2P32243 289 aa14.41□□□□□ -0.1
CUX1-211ENST00000546411 CD79BP40259 229 aa14.41□□□□□ -0.1
CUX1-211ENST00000546411 CXCL12P48061 93 aa14.41□□□□□ -0.1
CUX1-211ENST00000546411 SNU13P55769 128 aaKnown RBP14.41□□□□□ -0.1
CUX1-211ENST00000546411 TPBGQ13641 420 aa14.41□□□□□ -0.1
CUX1-211ENST00000546411 GALEQ14376 348 aa14.41□□□□□ -0.1
CUX1-211ENST00000546411 YOD1Q5VVQ6 348 aaPredicted RBP14.41□□□□□ -0.1
CUX1-211ENST00000546411 TPRA1Q86W33 373 aa14.41□□□□□ -0.1
CUX1-211ENST00000546411 SLC35F3Q8IY50 421 aa14.41□□□□□ -0.1
CUX1-211ENST00000546411 GALNT6Q8NCL4 622 aa14.41□□□□□ -0.1
CUX1-211ENST00000546411 OR51D1Q8NGF3 324 aa14.41□□□□□ -0.1
CUX1-211ENST00000546411 METTL17Q9H7H0 456 aaPredicted RBP14.41□□□□□ -0.1
CUX1-211ENST00000546411 TRBV11-1A0A0K0K1C0 115 aa14.4□□□□□ -0.1
CUX1-211ENST00000546411 MPIG6BO95866 241 aa14.4□□□□□ -0.1
CUX1-211ENST00000546411 LIMS3P0CW19 117 aa14.4□□□□□ -0.1
CUX1-211ENST00000546411 LIMS4P0CW20 117 aa14.4□□□□□ -0.1
CUX1-211ENST00000546411 SLC6A8P48029 635 aa14.4□□□□□ -0.1
CUX1-211ENST00000546411 POU3F4P49335 361 aa14.4□□□□□ -0.1
CUX1-211ENST00000546411 MVDP53602 400 aa14.4□□□□□ -0.1
CUX1-211ENST00000546411 LTBQ06643 244 aa14.4□□□□□ -0.1
CUX1-211ENST00000546411 FXNQ16595 210 aa14.4□□□□□ -0.1
CUX1-211ENST00000546411 SWI5Q1ZZU3 235 aa14.4□□□□□ -0.1
CUX1-211ENST00000546411 GLYR1Q49A26 553 aaPredicted RBP14.4□□□□□ -0.1
CUX1-211ENST00000546411 CHRDL2Q6WN34 429 aa14.4□□□□□ -0.1
CUX1-211ENST00000546411 GALNT11Q8NCW6 608 aa14.4□□□□□ -0.1
CUX1-211ENST00000546411 OR2A5Q96R48 311 aa14.4□□□□□ -0.1
CUX1-211ENST00000546411 STACQ99469 402 aa14.4□□□□□ -0.1
CUX1-211ENST00000546411 GPA33Q99795 319 aa14.4□□□□□ -0.1
CUX1-211ENST00000546411 CTRCQ99895 268 aa14.4□□□□□ -0.1
CUX1-211ENST00000546411 HCAR1Q9BXC0 346 aa14.4□□□□□ -0.1
CUX1-211ENST00000546411 OR11A1Q9GZK7 315 aa14.4□□□□□ -0.1
CUX1-211ENST00000546411 NXF5Q9H1B4 397 aaKnown RBP14.4□□□□□ -0.1
CUX1-211ENST00000546411 COPZ2Q9P299 210 aa14.4□□□□□ -0.1
CUX1-211ENST00000546411 A0A1W2PPV9 198 aa14.4□□□□□ -0.1
CUX1-211ENST00000546411 BCAT2O15382 392 aaPredicted RBP14.4□□□□□ -0.1
CUX1-211ENST00000546411 SUSD5O60279 629 aa14.4□□□□□ -0.1
CUX1-211ENST00000546411 CBFBQ13951 182 aa14.4□□□□□ -0.1
CUX1-211ENST00000546411 BRIX1Q8TDN6 353 aaKnown RBP14.4□□□□□ -0.1
CUX1-211ENST00000546411 ADAMTS14Q8WXS8 1223 aa14.4□□□□□ -0.1
CUX1-211ENST00000546411 NOX3Q9HBY0 568 aa14.4□□□□□ -0.1
CUX1-211ENST00000546411 FAM60AQ9NP50 221 aa14.4□□□□□ -0.1
CUX1-211ENST00000546411 ARRDC5A6NEK1 342 aa14.4□□□□□ -0.1
CUX1-211ENST00000546411 RAB3DO95716 219 aa14.4□□□□□ -0.1
CUX1-211ENST00000546411 TGM1P22735 817 aa14.4□□□□□ -0.1
CUX1-211ENST00000546411 ARPC4P59998 168 aa14.4□□□□□ -0.1
CUX1-211ENST00000546411 DLX2Q07687 328 aaPredicted RBP14.4□□□□□ -0.1
CUX1-211ENST00000546411 POU4F3Q15319 338 aa14.4□□□□□ -0.1
CUX1-211ENST00000546411 NDUFAF7Q7L592 441 aa14.4□□□□□ -0.1
CUX1-211ENST00000546411 NKX3-1Q99801 234 aaPredicted RBP14.4□□□□□ -0.1
CUX1-211ENST00000546411 EMC6Q9BV81 110 aa14.4□□□□□ -0.1
CUX1-211ENST00000546411 TSPAN10Q9H1Z9 355 aaPredicted RBP14.4□□□□□ -0.1
CUX1-211ENST00000546411 LIN7BQ9HAP6 207 aa14.4□□□□□ -0.1
CUX1-211ENST00000546411 DISC1C4P0D8 188 aa14.39□□□□□ -0.11
CUX1-211ENST00000546411 IFITM3Q01628 133 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms