RNA–Protein interactions for RNA: ENST00000545450.6

MSLN-202, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-202ENST00000545450 C7orf57Q8NEG2 295 aa17.23■□□□□ 0.35
MSLN-202ENST00000545450 OR7G2Q8NG99 324 aa17.23■□□□□ 0.35
MSLN-202ENST00000545450 LGALS14Q8TCE9 139 aa17.23■□□□□ 0.35
MSLN-202ENST00000545450 DNASE2BQ8WZ79 361 aa17.23■□□□□ 0.35
MSLN-202ENST00000545450 SMIM10Q96HG1 83 aa17.23■□□□□ 0.35
MSLN-202ENST00000545450 MS4A4EQ96PG1 132 aa17.23■□□□□ 0.35
MSLN-202ENST00000545450 MED9Q9NWA0 146 aa17.23■□□□□ 0.35
MSLN-202ENST00000545450 SDHAF2Q9NX18 166 aa17.23■□□□□ 0.35
MSLN-202ENST00000545450 FBXL4Q9UKA2 621 aa17.23■□□□□ 0.35
MSLN-202ENST00000545450 RCE1Q9Y256 329 aa17.23■□□□□ 0.35
MSLN-202ENST00000545450 RIIAD1A6NNX1 92 aa17.23■□□□□ 0.35
MSLN-202ENST00000545450 HCRTR1O43613 425 aa17.23■□□□□ 0.35
MSLN-202ENST00000545450 PDGFBP01127 241 aaPredicted RBP17.23■□□□□ 0.35
MSLN-202ENST00000545450 CXCL2P19875 107 aa17.23■□□□□ 0.35
MSLN-202ENST00000545450 RPS11P62280 158 aaKnown RBP eCLIP17.23■□□□□ 0.35
MSLN-202ENST00000545450 CRMP1Q14194 572 aa17.23■□□□□ 0.35
MSLN-202ENST00000545450 OR1Q1Q15612 314 aa17.23■□□□□ 0.35
MSLN-202ENST00000545450 OR13C2Q8NGS9 318 aa17.23■□□□□ 0.35
MSLN-202ENST00000545450 SMIM19Q96E16 107 aa17.23■□□□□ 0.35
MSLN-202ENST00000545450 AKAP7Q9P0M2 348 aaPredicted RBP17.23■□□□□ 0.35
MSLN-202ENST00000545450 MRPS2Q9Y399 296 aaKnown RBP17.23■□□□□ 0.35
MSLN-202ENST00000545450 NAP1L6A6NFF2 107 aa17.22■□□□□ 0.35
MSLN-202ENST00000545450 TSPAN4O14817 238 aa17.22■□□□□ 0.35
MSLN-202ENST00000545450 TSPAN9O75954 239 aa17.22■□□□□ 0.35
MSLN-202ENST00000545450 SNAPC5O75971 98 aa17.22■□□□□ 0.35
MSLN-202ENST00000545450 ECDO95905 644 aaPredicted RBP17.22■□□□□ 0.35
MSLN-202ENST00000545450 ATP1B1P05026 303 aa17.22■□□□□ 0.35
MSLN-202ENST00000545450 ALDOBP05062 364 aa17.22■□□□□ 0.35
MSLN-202ENST00000545450 ADRB1P08588 477 aa17.22■□□□□ 0.35
MSLN-202ENST00000545450 ST6GAL1P15907 406 aa17.22■□□□□ 0.35
MSLN-202ENST00000545450 GDI2P50395 445 aaKnown RBP17.22■□□□□ 0.35
MSLN-202ENST00000545450 POU4F2Q12837 409 aa17.22■□□□□ 0.35
MSLN-202ENST00000545450 DEFB133Q30KQ1 61 aa17.22■□□□□ 0.35
MSLN-202ENST00000545450 DEFB134Q4QY38 66 aa17.22■□□□□ 0.35
MSLN-202ENST00000545450 FCRLBQ6BAA4 426 aa17.22■□□□□ 0.35
MSLN-202ENST00000545450 OR6V1Q8N148 313 aa17.22■□□□□ 0.35
MSLN-202ENST00000545450 ZNF671Q8TAW3 534 aa17.22■□□□□ 0.35
MSLN-202ENST00000545450 BPIFA2Q96DR5 249 aa17.22■□□□□ 0.35
MSLN-202ENST00000545450 LINC00052Q96N35 136 aa17.22■□□□□ 0.35
MSLN-202ENST00000545450 CHIAQ9BZP6 476 aa17.22■□□□□ 0.35
MSLN-202ENST00000545450 B3GNT4Q9C0J1 378 aa17.22■□□□□ 0.35
MSLN-202ENST00000545450 DUSP15Q9H1R2 295 aaPredicted RBP17.22■□□□□ 0.35
MSLN-202ENST00000545450 OR10A4Q9H209 315 aa17.22■□□□□ 0.35
MSLN-202ENST00000545450 MRPL15Q9P015 296 aaKnown RBP17.22■□□□□ 0.35
MSLN-202ENST00000545450 AK6Q9Y3D8 172 aaKnown RBP17.22■□□□□ 0.35
MSLN-202ENST00000545450 DNAJB6O75190 326 aa17.22■□□□□ 0.35
MSLN-202ENST00000545450 PTP4A3O75365 173 aa17.22■□□□□ 0.35
MSLN-202ENST00000545450 GATBO75879 557 aaKnown RBP17.22■□□□□ 0.35
MSLN-202ENST00000545450 GIPP09681 153 aaPredicted RBP17.22■□□□□ 0.35
MSLN-202ENST00000545450 CPN1P15169 458 aa17.22■□□□□ 0.35
MSLN-202ENST00000545450 HNRNPKP61978 463 aaKnown RBP eCLIP17.22■□□□□ 0.35
MSLN-202ENST00000545450 CDK5R1Q15078 307 aa17.22■□□□□ 0.35
MSLN-202ENST00000545450 RGS7BPQ6MZT1 257 aaPredicted RBP17.22■□□□□ 0.35
MSLN-202ENST00000545450 ARMC6Q6NXE6 501 aa17.22■□□□□ 0.35
MSLN-202ENST00000545450 FAM198BQ6UWH4 519 aa17.22■□□□□ 0.35
MSLN-202ENST00000545450 LINGO2Q7L985 606 aa17.22■□□□□ 0.35
MSLN-202ENST00000545450 CYB561A3Q8NBI2 242 aa17.22■□□□□ 0.35
MSLN-202ENST00000545450 CAMKVQ8NCB2 501 aa17.22■□□□□ 0.35
MSLN-202ENST00000545450 OR4C6Q8NH72 309 aa17.22■□□□□ 0.35
MSLN-202ENST00000545450 RERGQ96A58 199 aaPredicted RBP17.22■□□□□ 0.35
MSLN-202ENST00000545450 PELI1Q96FA3 418 aa17.22■□□□□ 0.35
MSLN-202ENST00000545450 SDF2Q99470 211 aa17.22■□□□□ 0.35
MSLN-202ENST00000545450 SHARPINQ9H0F6 387 aa17.22■□□□□ 0.35
MSLN-202ENST00000545450 FAM60AQ9NP50 221 aa17.22■□□□□ 0.35
MSLN-202ENST00000545450 TMEM74BQ9NUR3 256 aa17.22■□□□□ 0.35
MSLN-202ENST00000545450 FBXL3Q9UKT7 428 aa17.22■□□□□ 0.35
MSLN-202ENST00000545450 SPTBP11277 2137 aa17.21■□□□□ 0.35
MSLN-202ENST00000545450 CABIN1Q9Y6J0 2220 aa17.21■□□□□ 0.35
MSLN-202ENST00000545450 OR6C65A6NJZ3 312 aa17.21■□□□□ 0.35
MSLN-202ENST00000545450 LMO7DNF2Z398 122 aa17.21■□□□□ 0.35
MSLN-202ENST00000545450 GABARAPH6UMI1 98 aa17.21■□□□□ 0.35
MSLN-202ENST00000545450 GKN3PP0CG01 181 aa17.21■□□□□ 0.35
MSLN-202ENST00000545450 ZNF3P17036 446 aa17.21■□□□□ 0.35
MSLN-202ENST00000545450 TP53I3Q53FA7 332 aa17.21■□□□□ 0.35
MSLN-202ENST00000545450 FAM199XQ6PEV8 388 aaPredicted RBP17.21■□□□□ 0.35
MSLN-202ENST00000545450 GLDNQ6ZMI3 551 aaPredicted RBP17.21■□□□□ 0.35
MSLN-202ENST00000545450 CDK20Q8IZL9 346 aa17.21■□□□□ 0.35
MSLN-202ENST00000545450 RFLNBQ8N5W9 214 aa17.21■□□□□ 0.35
MSLN-202ENST00000545450 MOSPD2Q8NHP6 518 aa17.21■□□□□ 0.35
MSLN-202ENST00000545450 ELMOD3Q96FG2 381 aa17.21■□□□□ 0.35
MSLN-202ENST00000545450 C10orf90Q96M02 699 aa17.21■□□□□ 0.35
MSLN-202ENST00000545450 TMPRSS13Q9BYE2 586 aa17.21■□□□□ 0.35
MSLN-202ENST00000545450 NRIP3Q9NQ35 241 aa17.21■□□□□ 0.35
MSLN-202ENST00000545450 MGAT4CQ9UBM8 478 aa17.21■□□□□ 0.35
MSLN-202ENST00000545450 CACNA1EQ15878 2313 aa17.21■□□□□ 0.35
MSLN-202ENST00000545450 BCAT2O15382 392 aaPredicted RBP17.21■□□□□ 0.34
MSLN-202ENST00000545450 PPM1BO75688 479 aa17.21■□□□□ 0.34
MSLN-202ENST00000545450 CD1AP06126 327 aa17.21■□□□□ 0.34
MSLN-202ENST00000545450 AP3S2P59780 193 aa17.21■□□□□ 0.34
MSLN-202ENST00000545450 DUSP5Q16690 384 aa17.21■□□□□ 0.34
MSLN-202ENST00000545450 TUSC1Q2TAM9 212 aa17.21■□□□□ 0.34
MSLN-202ENST00000545450 PRSS41Q7RTY9 318 aa17.21■□□□□ 0.34
MSLN-202ENST00000545450 C17orf82Q86X59 251 aaPredicted RBP17.21■□□□□ 0.34
MSLN-202ENST00000545450 OR52I2Q8NH67 350 aa17.21■□□□□ 0.34
MSLN-202ENST00000545450 SMAD5Q99717 465 aaKnown RBP17.21■□□□□ 0.34
MSLN-202ENST00000545450 C1QTNF6Q9BXI9 259 aa17.21■□□□□ 0.34
MSLN-202ENST00000545450 SEMA6CQ9H3T2 930 aa17.21■□□□□ 0.34
MSLN-202ENST00000545450 ING1Q9UK53 422 aaPredicted RBP17.21■□□□□ 0.34
MSLN-202ENST00000545450 A0A1B0GTQ1 180 aa17.2■□□□□ 0.34
MSLN-202ENST00000545450 L7N2F9 121 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms