RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 LAT2Q9GZY6 243 aa11.91□□□□□ -0.5
CPSF7-223ENST00000544669 SPRTNQ9H040 489 aaPredicted RBP11.91□□□□□ -0.5
CPSF7-223ENST00000544669 RAB33BQ9H082 229 aa11.91□□□□□ -0.5
CPSF7-223ENST00000544669 FKRPQ9H9S5 495 aa11.91□□□□□ -0.5
CPSF7-223ENST00000544669 PDE7BQ9NP56 450 aa11.91□□□□□ -0.5
CPSF7-223ENST00000544669 CLEC1BQ9P126 229 aa11.91□□□□□ -0.5
CPSF7-223ENST00000544669 AK6Q9Y3D8 172 aaKnown RBP11.91□□□□□ -0.5
CPSF7-223ENST00000544669 BRCA2P51587 3418 aa11.91□□□□□ -0.5
CPSF7-223ENST00000544669 TRAV6A0A075B6T7 132 aa11.9□□□□□ -0.5
CPSF7-223ENST00000544669 FITM1A5D6W6 292 aa11.9□□□□□ -0.5
CPSF7-223ENST00000544669 OR6C68A6NDL8 312 aa11.9□□□□□ -0.5
CPSF7-223ENST00000544669 TMEM150CB9EJG8 249 aa11.9□□□□□ -0.5
CPSF7-223ENST00000544669 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.9□□□□□ -0.5
CPSF7-223ENST00000544669 SSNA1O43805 119 aa11.9□□□□□ -0.5
CPSF7-223ENST00000544669 ZNF217O75362 1048 aa11.9□□□□□ -0.5
CPSF7-223ENST00000544669 MT-ATP6P00846 226 aa11.9□□□□□ -0.5
CPSF7-223ENST00000544669 PROS1P07225 676 aa11.9□□□□□ -0.5
CPSF7-223ENST00000544669 CD3GP09693 182 aa11.9□□□□□ -0.5
CPSF7-223ENST00000544669 SULT1A3P0DMM9 295 aa11.9□□□□□ -0.5
CPSF7-223ENST00000544669 SULT1A4P0DMN0 295 aa11.9□□□□□ -0.5
CPSF7-223ENST00000544669 TFPIP10646 304 aa11.9□□□□□ -0.5
CPSF7-223ENST00000544669 EVI2BP34910 448 aa11.9□□□□□ -0.5
CPSF7-223ENST00000544669 SHHQ15465 462 aa11.9□□□□□ -0.5
CPSF7-223ENST00000544669 ZBTB37Q5TC79 503 aa11.9□□□□□ -0.5
CPSF7-223ENST00000544669 ZC3H14Q6PJT7 736 aaKnown RBP11.9□□□□□ -0.5
CPSF7-223ENST00000544669 C5orf46Q6UWT4 87 aa11.9□□□□□ -0.5
CPSF7-223ENST00000544669 LINGO2Q7L985 606 aa11.9□□□□□ -0.5
CPSF7-223ENST00000544669 OR4C3Q8NH37 302 aa11.9□□□□□ -0.5
CPSF7-223ENST00000544669 LGALS14Q8TCE9 139 aa11.9□□□□□ -0.5
CPSF7-223ENST00000544669 DOK4Q8TEW6 326 aa11.9□□□□□ -0.5
CPSF7-223ENST00000544669 C17orf50Q8WW18 174 aa11.9□□□□□ -0.5
CPSF7-223ENST00000544669 PATE1Q8WXA2 126 aa11.9□□□□□ -0.5
CPSF7-223ENST00000544669 MIB2Q96AX9 1013 aa11.9□□□□□ -0.5
CPSF7-223ENST00000544669 DERL3Q96Q80 235 aa11.9□□□□□ -0.5
CPSF7-223ENST00000544669 SLX1AQ9BQ83 275 aa11.9□□□□□ -0.5
CPSF7-223ENST00000544669 STARD5Q9NSY2 213 aa11.9□□□□□ -0.5
CPSF7-223ENST00000544669 HCN3Q9P1Z3 774 aa11.9□□□□□ -0.5
CPSF7-223ENST00000544669 LRIT1Q9P2V4 623 aa11.9□□□□□ -0.5
CPSF7-223ENST00000544669 FBXL3Q9UKT7 428 aa11.9□□□□□ -0.5
CPSF7-223ENST00000544669 MGAT4AQ9UM21 535 aa11.9□□□□□ -0.5
CPSF7-223ENST00000544669 A0A1B0GUH1 482 aa11.9□□□□□ -0.5
CPSF7-223ENST00000544669 A0A1W2PPC4 97 aa11.9□□□□□ -0.5
CPSF7-223ENST00000544669 FRG2CA6NGY1 282 aa11.9□□□□□ -0.5
CPSF7-223ENST00000544669 BLOC1S5-TXNDC5H3BN57 136 aa11.9□□□□□ -0.5
CPSF7-223ENST00000544669 EIF4E2O60573 245 aaKnown RBP11.9□□□□□ -0.5
CPSF7-223ENST00000544669 ADAM11O75078 769 aa11.9□□□□□ -0.5
CPSF7-223ENST00000544669 TPOP07202 933 aa11.9□□□□□ -0.5
CPSF7-223ENST00000544669 ASAH2BP0C7U1 165 aa11.9□□□□□ -0.5
CPSF7-223ENST00000544669 CPN1P15169 458 aa11.9□□□□□ -0.5
CPSF7-223ENST00000544669 CFPP27918 469 aa11.9□□□□□ -0.5
CPSF7-223ENST00000544669 PGDP52209 483 aa11.9□□□□□ -0.5
CPSF7-223ENST00000544669 CTXN1P60606 82 aa11.9□□□□□ -0.5
CPSF7-223ENST00000544669 ERVK-25P63136 954 aa11.9□□□□□ -0.5
CPSF7-223ENST00000544669 DGCR2P98153 550 aa11.9□□□□□ -0.5
CPSF7-223ENST00000544669 SSBP1Q04837 148 aaKnown RBP11.9□□□□□ -0.5
CPSF7-223ENST00000544669 Q5BKY6 102 aa11.9□□□□□ -0.5
CPSF7-223ENST00000544669 C1QTNF12Q5T7M4 302 aa11.9□□□□□ -0.5
CPSF7-223ENST00000544669 LINC01590Q5TEZ4 76 aa11.9□□□□□ -0.5
CPSF7-223ENST00000544669 CMTM4Q8IZR5 234 aa11.9□□□□□ -0.5
CPSF7-223ENST00000544669 ZNF784Q8NCA9 323 aaPredicted RBP11.9□□□□□ -0.5
CPSF7-223ENST00000544669 OR51Q1Q8NH59 317 aa11.9□□□□□ -0.5
CPSF7-223ENST00000544669 C1orf216Q8TAB5 229 aa11.9□□□□□ -0.5
CPSF7-223ENST00000544669 HMGB4Q8WW32 186 aa11.9□□□□□ -0.5
CPSF7-223ENST00000544669 ASB13Q8WXK3 278 aa11.9□□□□□ -0.5
CPSF7-223ENST00000544669 HAVCR1Q96D42 359 aa11.9□□□□□ -0.5
CPSF7-223ENST00000544669 MMABQ96EY8 250 aaPredicted RBP11.9□□□□□ -0.5
CPSF7-223ENST00000544669 TOE1Q96GM8 510 aaKnown RBP11.9□□□□□ -0.5
CPSF7-223ENST00000544669 ZDHHC12Q96GR4 267 aa11.9□□□□□ -0.5
CPSF7-223ENST00000544669 SLC38A3Q99624 504 aa11.9□□□□□ -0.5
CPSF7-223ENST00000544669 IRF2BPLQ9H1B7 796 aa11.9□□□□□ -0.5
CPSF7-223ENST00000544669 WDR76Q9H967 626 aa11.9□□□□□ -0.5
CPSF7-223ENST00000544669 MMP25Q9NPA2 562 aa11.9□□□□□ -0.5
CPSF7-223ENST00000544669 LAMP5Q9UJQ1 280 aa11.9□□□□□ -0.5
CPSF7-223ENST00000544669 CDV3Q9UKY7 258 aaKnown RBP11.9□□□□□ -0.5
CPSF7-223ENST00000544669 ADAM18Q9Y3Q7 739 aa11.9□□□□□ -0.5
CPSF7-223ENST00000544669 NPTNQ9Y639 398 aa11.9□□□□□ -0.5
CPSF7-223ENST00000544669 MYO7AQ13402 2215 aa11.89□□□□□ -0.51
CPSF7-223ENST00000544669 A0A1W2PQD3 144 aa11.89□□□□□ -0.51
CPSF7-223ENST00000544669 TLCD2A6NGC4 264 aa11.89□□□□□ -0.51
CPSF7-223ENST00000544669 TUBAL3A6NHL2 446 aa11.89□□□□□ -0.51
CPSF7-223ENST00000544669 TTLL8A6PVC2 850 aa11.89□□□□□ -0.51
CPSF7-223ENST00000544669 SNRPGP15A8MWD9 76 aa11.89□□□□□ -0.51
CPSF7-223ENST00000544669 CDC40O60508 579 aaKnown RBP eCLIP11.89□□□□□ -0.51
CPSF7-223ENST00000544669 IL5P05113 134 aa11.89□□□□□ -0.51
CPSF7-223ENST00000544669 DPP4P27487 766 aa11.89□□□□□ -0.51
CPSF7-223ENST00000544669 PBX2P40425 430 aa11.89□□□□□ -0.51
CPSF7-223ENST00000544669 SRP9P49458 86 aaKnown RBP11.89□□□□□ -0.51
CPSF7-223ENST00000544669 CAPZA1P52907 286 aa11.89□□□□□ -0.51
CPSF7-223ENST00000544669 TOMM20Q15388 145 aa11.89□□□□□ -0.51
CPSF7-223ENST00000544669 NDUFAF6Q330K2 333 aa11.89□□□□□ -0.51
CPSF7-223ENST00000544669 ESCO2Q56NI9 601 aa11.89□□□□□ -0.51
CPSF7-223ENST00000544669 TMEM69Q5SWH9 247 aa11.89□□□□□ -0.51
CPSF7-223ENST00000544669 FNDC7Q5VTL7 733 aa11.89□□□□□ -0.51
CPSF7-223ENST00000544669 OLFML2AQ68BL7 652 aa11.89□□□□□ -0.51
CPSF7-223ENST00000544669 LAMTOR1Q6IAA8 161 aa11.89□□□□□ -0.51
CPSF7-223ENST00000544669 FAM122BQ7Z309 247 aa11.89□□□□□ -0.51
CPSF7-223ENST00000544669 ZNF227Q86WZ6 799 aa11.89□□□□□ -0.51
CPSF7-223ENST00000544669 OR8H1Q8NGG4 311 aa11.89□□□□□ -0.51
CPSF7-223ENST00000544669 PHOSPHO1Q8TCT1 267 aa11.89□□□□□ -0.51
CPSF7-223ENST00000544669 GPR148Q8TDV2 347 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms